RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 HEG1Q9ULI3 1381 aa19.19■□□□□ 0.66
HNRNPU-229ENST00000640440 ZPR1O75312 459 aa19.18■□□□□ 0.66
HNRNPU-229ENST00000640440 MCM10Q7L590 875 aa19.18■□□□□ 0.66
HNRNPU-229ENST00000640440 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
HNRNPU-229ENST00000640440 BTBD11A6QL63 1104 aa19.17■□□□□ 0.66
HNRNPU-229ENST00000640440 KCNQ3O43525 872 aa19.17■□□□□ 0.66
HNRNPU-229ENST00000640440 STARD3NLO95772 234 aa19.17■□□□□ 0.66
HNRNPU-229ENST00000640440 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
HNRNPU-229ENST00000640440 DDR1Q08345 913 aa19.17■□□□□ 0.66
HNRNPU-229ENST00000640440 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
HNRNPU-229ENST00000640440 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
HNRNPU-229ENST00000640440 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
HNRNPU-229ENST00000640440 FMNL2Q96PY5 1086 aa19.16■□□□□ 0.66
HNRNPU-229ENST00000640440 SCN7AQ01118 1682 aa19.15■□□□□ 0.66
HNRNPU-229ENST00000640440 NARFQ9UHQ1 456 aa19.15■□□□□ 0.66
HNRNPU-229ENST00000640440 ARFGEF1Q9Y6D6 1849 aa19.15■□□□□ 0.66
HNRNPU-229ENST00000640440 A0A0G2JLW4 131 aa19.14■□□□□ 0.65
HNRNPU-229ENST00000640440 NEFMP07197 916 aa19.14■□□□□ 0.65
HNRNPU-229ENST00000640440 TGFB2P61812 414 aa19.14■□□□□ 0.65
HNRNPU-229ENST00000640440 RALBP1Q15311 655 aa19.14■□□□□ 0.65
HNRNPU-229ENST00000640440 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.65
HNRNPU-229ENST00000640440 POLRMTO00411 1230 aaKnown RBP19.13■□□□□ 0.65
HNRNPU-229ENST00000640440 DPEP1P16444 411 aa19.13■□□□□ 0.65
HNRNPU-229ENST00000640440 TEX13AQ9BXU3 409 aaPredicted RBP19.13■□□□□ 0.65
HNRNPU-229ENST00000640440 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
HNRNPU-229ENST00000640440 EIF5P55010 431 aaKnown RBP19.12■□□□□ 0.65
HNRNPU-229ENST00000640440 ZNF330Q9Y3S2 320 aaPredicted RBP19.12■□□□□ 0.65
HNRNPU-229ENST00000640440 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 TM4SF1P30408 202 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 NFIXQ14938 502 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 PLEKHF1Q96S99 279 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 BCL2L12Q9HB09 334 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
HNRNPU-229ENST00000640440 A0A087WZG4 1122 aa19.1■□□□□ 0.65
HNRNPU-229ENST00000640440 BCS1LQ9Y276 419 aa19.1■□□□□ 0.65
HNRNPU-229ENST00000640440 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
HNRNPU-229ENST00000640440 A1BGP04217 495 aa19.09■□□□□ 0.65
HNRNPU-229ENST00000640440 DLEC1Q9Y238 1755 aa19.09■□□□□ 0.65
HNRNPU-229ENST00000640440 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.64
HNRNPU-229ENST00000640440 IL6STP40189 918 aaPredicted RBP19.08■□□□□ 0.64
HNRNPU-229ENST00000640440 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
HNRNPU-229ENST00000640440 ATP10DQ9P241 1426 aa19.08■□□□□ 0.64
HNRNPU-229ENST00000640440 MYBBP1AQ9BQG0 1328 aaKnown RBP19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 TAF7Q15545 349 aaPredicted RBP19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 MIS18AQ9NYP9 233 aa19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
HNRNPU-229ENST00000640440 ADCY9O60503 1353 aa19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 KCNA3P22001 575 aa19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 CHRNA5P30532 468 aa19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 BICDL1Q6ZP65 573 aa19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 NPM2Q86SE8 214 aaKnown RBP19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
HNRNPU-229ENST00000640440 SBF1O95248 1867 aa19.04■□□□□ 0.64
HNRNPU-229ENST00000640440 SERPINB2P05120 415 aa19.04■□□□□ 0.64
HNRNPU-229ENST00000640440 TBC1D9BQ66K14 1250 aa19.04■□□□□ 0.64
HNRNPU-229ENST00000640440 PIM2Q9P1W9 311 aa19.04■□□□□ 0.64
HNRNPU-229ENST00000640440 CARMIL3Q8ND23 1372 aa19.03■□□□□ 0.64
HNRNPU-229ENST00000640440 GIGYF1O75420 1035 aaPredicted RBP19.02■□□□□ 0.64
HNRNPU-229ENST00000640440 CAMTA2O94983 1202 aa19.02■□□□□ 0.64
HNRNPU-229ENST00000640440 DALRD3Q5D0E6 543 aaKnown RBP19.02■□□□□ 0.64
HNRNPU-229ENST00000640440 ARHGAP27Q6ZUM4 889 aa19.02■□□□□ 0.64
HNRNPU-229ENST00000640440 CACNA1SQ13698 1873 aa19.02■□□□□ 0.64
HNRNPU-229ENST00000640440 COL11A2P13942 1736 aaPredicted RBP19.01■□□□□ 0.63
HNRNPU-229ENST00000640440 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
HNRNPU-229ENST00000640440 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
HNRNPU-229ENST00000640440 CCDC88AQ3V6T2 1871 aa19.01■□□□□ 0.63
HNRNPU-229ENST00000640440 ZNF526Q8TF50 670 aaPredicted RBP19■□□□□ 0.63
HNRNPU-229ENST00000640440 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 RIPK4P57078 832 aa18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 GPBP1L1Q9HC44 474 aaPredicted RBP18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 NUP98P52948 1817 aa18.99■□□□□ 0.63
HNRNPU-229ENST00000640440 C2CD5Q86YS7 1000 aa18.98■□□□□ 0.63
HNRNPU-229ENST00000640440 TMPOP42166 694 aaKnown RBP18.97■□□□□ 0.63
HNRNPU-229ENST00000640440 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
HNRNPU-229ENST00000640440 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■□□□ 12.5
HNRNPU-229ENST00000640440 CCDC24Q8N4L8 307 aa18.97■□□□□ 0.63
HNRNPU-229ENST00000640440 SETDB2Q96T68 719 aa18.97■□□□□ 0.63
HNRNPU-229ENST00000640440 PRR5LQ6MZQ0 368 aa18.96■□□□□ 0.63
HNRNPU-229ENST00000640440 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
HNRNPU-229ENST00000640440 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
HNRNPU-229ENST00000640440 H0YIN7 160 aa18.95■□□□□ 0.62
HNRNPU-229ENST00000640440 NPHP1O15259 732 aa18.95■□□□□ 0.62
HNRNPU-229ENST00000640440 CNBD1Q8NA66 436 aa18.95■□□□□ 0.62
HNRNPU-229ENST00000640440 TSPYL4Q9UJ04 414 aa18.95■□□□□ 0.62
HNRNPU-229ENST00000640440 ZNF652Q9Y2D9 606 aa18.95■□□□□ 0.62
HNRNPU-229ENST00000640440 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
HNRNPU-229ENST00000640440 ARFGEF2Q9Y6D5 1785 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
HNRNPU-229ENST00000640440 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms