RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 THUMPD2Q9BTF0 503 aaKnown RBP29.85■■■□□ 2.37
SHISA9-205ENST00000639941 MAPK8IP3Q9UPT6 1336 aa29.85■■■□□ 2.37
SHISA9-205ENST00000639941 KIF13BQ9NQT8 1826 aa29.85■■■□□ 2.37
SHISA9-205ENST00000639941 PRAMEF22A3QJZ6 481 aa29.84■■■□□ 2.37
SHISA9-205ENST00000639941 STARD3NLO95772 234 aa29.84■■■□□ 2.37
SHISA9-205ENST00000639941 PNNQ9H307 717 aaKnown RBP29.84■■■□□ 2.37
SHISA9-205ENST00000639941 CANXP27824 592 aaKnown RBP29.83■■■□□ 2.37
SHISA9-205ENST00000639941 MIS18AQ9NYP9 233 aa29.83■■■□□ 2.37
SHISA9-205ENST00000639941 KDM3BQ7LBC6 1761 aa29.82■■■□□ 2.36
SHISA9-205ENST00000639941 KIAA1551Q9HCM1 1747 aa29.82■■■□□ 2.36
SHISA9-205ENST00000639941 TAF7Q15545 349 aaPredicted RBP29.82■■■□□ 2.36
SHISA9-205ENST00000639941 GPR162Q16538 588 aa29.82■■■□□ 2.36
SHISA9-205ENST00000639941 ZNF316A6NFI3 1004 aaPredicted RBP29.81■■■□□ 2.36
SHISA9-205ENST00000639941 YBX3P16989 372 aaKnown RBP eCLIP29.81■■■□□ 2.36
SHISA9-205ENST00000639941 USPL1Q5W0Q7 1092 aa29.81■■■□□ 2.36
SHISA9-205ENST00000639941 TEX13AQ9BXU3 409 aaPredicted RBP29.81■■■□□ 2.36
SHISA9-205ENST00000639941 EIF5P55010 431 aaKnown RBP29.8■■■□□ 2.36
SHISA9-205ENST00000639941 DDR1Q08345 913 aa29.8■■■□□ 2.36
SHISA9-205ENST00000639941 CCDC146Q8IYE0 955 aa29.8■■■□□ 2.36
SHISA9-205ENST00000639941 PELP1Q8IZL8 1130 aaKnown RBP29.8■■■□□ 2.36
SHISA9-205ENST00000639941 C10orf71Q711Q0 1435 aa29.79■■■□□ 2.36
SHISA9-205ENST00000639941 A1BGP04217 495 aa29.79■■■□□ 2.36
SHISA9-205ENST00000639941 YY1P25490 414 aa29.79■■■□□ 2.36
SHISA9-205ENST00000639941 BCL2L12Q9HB09 334 aa29.79■■■□□ 2.36
SHISA9-205ENST00000639941 NARFQ9UHQ1 456 aa29.79■■■□□ 2.36
SHISA9-205ENST00000639941 USP16Q9Y5T5 823 aa29.79■■■□□ 2.36
SHISA9-205ENST00000639941 ADAMTS8Q9UP79 889 aa29.78■■■□□ 2.36
SHISA9-205ENST00000639941 ZPR1O75312 459 aa29.77■■■□□ 2.36
SHISA9-205ENST00000639941 TMPOP42166 694 aaKnown RBP29.77■■■□□ 2.36
SHISA9-205ENST00000639941 CHD4Q14839 1912 aa29.77■■■□□ 2.36
SHISA9-205ENST00000639941 TM4SF1P30408 202 aa29.76■■■□□ 2.35
SHISA9-205ENST00000639941 RIPK4P57078 832 aa29.76■■■□□ 2.35
SHISA9-205ENST00000639941 PARP3Q9Y6F1 533 aa29.76■■■□□ 2.35
SHISA9-205ENST00000639941 PXDNLA1KZ92 1463 aa29.75■■■□□ 2.35
SHISA9-205ENST00000639941 N4BP2Q86UW6 1770 aaPredicted RBP29.75■■■□□ 2.35
SHISA9-205ENST00000639941 SNRPA1P09661 255 aaKnown RBP29.75■■■□□ 2.35
SHISA9-205ENST00000639941 WDR43Q15061 677 aaKnown RBP eCLIP29.75■■■□□ 2.35
SHISA9-205ENST00000639941 RRP7AQ9Y3A4 280 aaKnown RBP29.75■■■□□ 2.35
SHISA9-205ENST00000639941 PIP4K2AP48426 406 aaPredicted RBP29.74■■■□□ 2.35
SHISA9-205ENST00000639941 SCN7AQ01118 1682 aa29.74■■■□□ 2.35
SHISA9-205ENST00000639941 POLRMTO00411 1230 aaKnown RBP29.73■■■□□ 2.35
SHISA9-205ENST00000639941 IL6STP40189 918 aaPredicted RBP29.73■■■□□ 2.35
SHISA9-205ENST00000639941 WWC3Q9ULE0 1092 aa29.73■■■□□ 2.35
SHISA9-205ENST00000639941 LAMB4A4D0S4 1761 aa29.72■■■□□ 2.35
SHISA9-205ENST00000639941 AFDNP55196 1824 aaKnown RBP29.71■■■□□ 2.35
SHISA9-205ENST00000639941 NFIXQ14938 502 aa29.71■■■□□ 2.35
SHISA9-205ENST00000639941 CCDC184Q52MB2 194 aa29.71■■■□□ 2.35
SHISA9-205ENST00000639941 RUNDC1Q96C34 613 aa29.71■■■□□ 2.35
SHISA9-205ENST00000639941 ZNF330Q9Y3S2 320 aaPredicted RBP29.71■■■□□ 2.35
SHISA9-205ENST00000639941 PNISRQ8TF01 805 aaKnown RBP29.7■■■□□ 2.35
SHISA9-205ENST00000639941 NRXN2Q9P2S2 1712 aa29.7■■■□□ 2.34
SHISA9-205ENST00000639941 A0A087WZG4 1122 aa29.69■■■□□ 2.34
SHISA9-205ENST00000639941 EIF4A1P60842 406 aaKnown RBP29.69■■■□□ 2.34
SHISA9-205ENST00000639941 TBC1D2BQ9UPU7 963 aa29.69■■■□□ 2.34
SHISA9-205ENST00000639941 BCORQ6W2J9 1755 aa29.68■■■□□ 2.34
SHISA9-205ENST00000639941 NBPF26B4DH59 902 aa29.68■■■□□ 2.34
SHISA9-205ENST00000639941 NEUROD2Q15784 382 aa29.68■■■□□ 2.34
SHISA9-205ENST00000639941 NBPF10Q6P3W6 841 aaKnown RBP29.68■■■□□ 2.34
SHISA9-205ENST00000639941 NBPF15Q8N660 670 aa29.68■■■□□ 2.34
SHISA9-205ENST00000639941 TRIM35Q9UPQ4 493 aa29.67■■■□□ 2.34
SHISA9-205ENST00000639941 BRCA1P38398 1863 aaKnown RBP29.67■■■□□ 2.34
SHISA9-205ENST00000639941 A0A0G2JLW4 131 aa29.66■■■□□ 2.34
SHISA9-205ENST00000639941 GIGYF1O75420 1035 aaPredicted RBP29.66■■■□□ 2.34
SHISA9-205ENST00000639941 TGFB2P61812 414 aa29.66■■■□□ 2.34
SHISA9-205ENST00000639941 CAMTA2O94983 1202 aa29.65■■■□□ 2.34
SHISA9-205ENST00000639941 DPEP1P16444 411 aa29.65■■■□□ 2.34
SHISA9-205ENST00000639941 GRIN3BO60391 1043 aa29.64■■■□□ 2.34
SHISA9-205ENST00000639941 LMOD3Q0VAK6 560 aa29.64■■■□□ 2.34
SHISA9-205ENST00000639941 TBC1D9BQ66K14 1250 aa29.64■■■□□ 2.34
SHISA9-205ENST00000639941 KCNA3P22001 575 aa29.63■■■□□ 2.33
SHISA9-205ENST00000639941 TSPYL4Q9UJ04 414 aa29.63■■■□□ 2.33
SHISA9-205ENST00000639941 BICDL1Q6ZP65 573 aa29.62■■■□□ 2.33
SHISA9-205ENST00000639941 DZIP3Q86Y13 1208 aaKnown RBP29.61■■■□□ 2.33
SHISA9-205ENST00000639941 SERPINB2P05120 415 aa29.6■■■□□ 2.33
SHISA9-205ENST00000639941 CARMIL3Q8ND23 1372 aa29.59■■■□□ 2.33
SHISA9-205ENST00000639941 CHRNA5P30532 468 aa29.57■■■□□ 2.32
SHISA9-205ENST00000639941 BABAM1Q9NWV8 329 aa29.57■■■□□ 2.32
SHISA9-205ENST00000639941 APAF1O14727 1248 aa29.56■■■□□ 2.32
SHISA9-205ENST00000639941 NPM2Q86SE8 214 aaKnown RBP29.56■■■□□ 2.32
SHISA9-205ENST00000639941 ZNF784Q8NCA9 323 aaPredicted RBP29.55■■■□□ 2.32
SHISA9-205ENST00000639941 ANKRD31Q8N7Z5 1873 aa29.55■■■□□ 2.32
SHISA9-205ENST00000639941 CHL1O00533 1208 aa29.54■■■□□ 2.32
SHISA9-205ENST00000639941 BCS1LQ9Y276 419 aa29.54■■■□□ 2.32
SHISA9-205ENST00000639941 ANP32CO43423 234 aa29.52■■■□□ 2.32
SHISA9-205ENST00000639941 ARFGEF1Q9Y6D6 1849 aa29.52■■■□□ 2.32
SHISA9-205ENST00000639941 DLEC1Q9Y238 1755 aa29.52■■■□□ 2.32
SHISA9-205ENST00000639941 KRT24Q2M2I5 525 aa29.51■■■□□ 2.31
SHISA9-205ENST00000639941 HLFQ16534 295 aa29.5■■■□□ 2.31
SHISA9-205ENST00000639941 PRR5LQ6MZQ0 368 aa29.5■■■□□ 2.31
SHISA9-205ENST00000639941 CCDC24Q8N4L8 307 aa29.5■■■□□ 2.31
SHISA9-205ENST00000639941 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
SHISA9-205ENST00000639941 LAS1LQ9Y4W2 734 aaKnown RBP29.5■■■□□ 2.31
SHISA9-205ENST00000639941 CLEC4GQ6UXB4 293 aa29.49■■■□□ 2.31
SHISA9-205ENST00000639941 SETDB2Q96T68 719 aa29.49■■■□□ 2.31
SHISA9-205ENST00000639941 PIM2Q9P1W9 311 aa29.49■■■□□ 2.31
SHISA9-205ENST00000639941 MYL6BP14649 208 aa29.48■■■□□ 2.31
SHISA9-205ENST00000639941 TTLL7Q6ZT98 887 aa29.48■■■□□ 2.31
SHISA9-205ENST00000639941 LRP10Q7Z4F1 713 aa29.48■■■□□ 2.31
SHISA9-205ENST00000639941 PDIA6Q15084 440 aa29.47■■■□□ 2.31
SHISA9-205ENST00000639941 COL11A2P13942 1736 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms