RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 ZBTB22O15209 634 aa13.18□□□□□ -0.3
TRIM43B-202ENST00000639673 NEFMP07197 916 aa13.18□□□□□ -0.3
TRIM43B-202ENST00000639673 NLGN1Q8N2Q7 840 aa13.18□□□□□ -0.3
TRIM43B-202ENST00000639673 COL15A1P39059 1388 aa13.18□□□□□ -0.3
TRIM43B-202ENST00000639673 FKBP8Q14318 412 aa13.18□□□□□ -0.3
TRIM43B-202ENST00000639673 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
TRIM43B-202ENST00000639673 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
TRIM43B-202ENST00000639673 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
TRIM43B-202ENST00000639673 YBX3P16989 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM43B-202ENST00000639673 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
TRIM43B-202ENST00000639673 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
TRIM43B-202ENST00000639673 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
TRIM43B-202ENST00000639673 STARD3NLO95772 234 aa13.16□□□□□ -0.3
TRIM43B-202ENST00000639673 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
TRIM43B-202ENST00000639673 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
TRIM43B-202ENST00000639673 ZPR1O75312 459 aa13.15□□□□□ -0.3
TRIM43B-202ENST00000639673 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
TRIM43B-202ENST00000639673 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
TRIM43B-202ENST00000639673 C10orf71Q711Q0 1435 aa13.15□□□□□ -0.3
TRIM43B-202ENST00000639673 KIF13BQ9NQT8 1826 aa13.15□□□□□ -0.3
TRIM43B-202ENST00000639673 DDR1Q08345 913 aa13.15□□□□□ -0.31
TRIM43B-202ENST00000639673 PNNQ9H307 717 aaKnown RBP13.15□□□□□ -0.31
TRIM43B-202ENST00000639673 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.31
TRIM43B-202ENST00000639673 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.31
TRIM43B-202ENST00000639673 PXDNLA1KZ92 1463 aa13.14□□□□□ -0.31
TRIM43B-202ENST00000639673 TAF7Q15545 349 aaPredicted RBP13.14□□□□□ -0.31
TRIM43B-202ENST00000639673 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
TRIM43B-202ENST00000639673 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
TRIM43B-202ENST00000639673 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
TRIM43B-202ENST00000639673 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
TRIM43B-202ENST00000639673 A1BGP04217 495 aa13.13□□□□□ -0.31
TRIM43B-202ENST00000639673 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
TRIM43B-202ENST00000639673 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
TRIM43B-202ENST00000639673 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
TRIM43B-202ENST00000639673 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
TRIM43B-202ENST00000639673 CHD4Q14839 1912 aa13.13□□□□□ -0.31
TRIM43B-202ENST00000639673 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
TRIM43B-202ENST00000639673 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
TRIM43B-202ENST00000639673 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
TRIM43B-202ENST00000639673 N4BP2Q86UW6 1770 aaPredicted RBP13.12□□□□□ -0.31
TRIM43B-202ENST00000639673 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
TRIM43B-202ENST00000639673 TM4SF1P30408 202 aa13.12□□□□□ -0.31
TRIM43B-202ENST00000639673 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 RIPK4P57078 832 aa13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 NFIXQ14938 502 aa13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
TRIM43B-202ENST00000639673 A0A087WZG4 1122 aa13.1□□□□□ -0.31
TRIM43B-202ENST00000639673 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
TRIM43B-202ENST00000639673 TGFB2P61812 414 aa13.1□□□□□ -0.31
TRIM43B-202ENST00000639673 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
TRIM43B-202ENST00000639673 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
TRIM43B-202ENST00000639673 DPEP1P16444 411 aa13.09□□□□□ -0.31
TRIM43B-202ENST00000639673 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
TRIM43B-202ENST00000639673 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
TRIM43B-202ENST00000639673 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.31
TRIM43B-202ENST00000639673 NEUROD2Q15784 382 aa13.08□□□□□ -0.31
TRIM43B-202ENST00000639673 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.31
TRIM43B-202ENST00000639673 AFDNP55196 1824 aaKnown RBP13.08□□□□□ -0.32
TRIM43B-202ENST00000639673 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
TRIM43B-202ENST00000639673 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
TRIM43B-202ENST00000639673 NPM2Q86SE8 214 aaKnown RBP13.08□□□□□ -0.32
TRIM43B-202ENST00000639673 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
TRIM43B-202ENST00000639673 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
TRIM43B-202ENST00000639673 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 SERPINB2P05120 415 aa13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
TRIM43B-202ENST00000639673 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 KCNA3P22001 575 aa13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 CHRNA5P30532 468 aa13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 CARMIL3Q8ND23 1372 aa13.06□□□□□ -0.32
TRIM43B-202ENST00000639673 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
TRIM43B-202ENST00000639673 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
TRIM43B-202ENST00000639673 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
TRIM43B-202ENST00000639673 NGEFQ8N5V2 710 aa13.02□□□□□ -0.32
TRIM43B-202ENST00000639673 PIM2Q9P1W9 311 aa13.02□□□□□ -0.32
TRIM43B-202ENST00000639673 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
TRIM43B-202ENST00000639673 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
TRIM43B-202ENST00000639673 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
TRIM43B-202ENST00000639673 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
TRIM43B-202ENST00000639673 MYL6BP14649 208 aa13.01□□□□□ -0.33
TRIM43B-202ENST00000639673 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
TRIM43B-202ENST00000639673 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
TRIM43B-202ENST00000639673 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
TRIM43B-202ENST00000639673 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
TRIM43B-202ENST00000639673 ATP10DQ9P241 1426 aa13□□□□□ -0.33
TRIM43B-202ENST00000639673 ADCY9O60503 1353 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms