RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	DALRD3	Q5D0E6	543 aa	Known RBP	10.48	□□□□□ -0.73
STRADA-238	ENST00000639603	ARHGEF1	Q92888	912 aa	Known RBP	10.48	□□□□□ -0.73
STRADA-238	ENST00000639603	ATG3	Q9NT62	314 aa		10.48	□□□□□ -0.73
STRADA-238	ENST00000639603	EMILIN1	Q9Y6C2	1016 aa		10.48	□□□□□ -0.73
STRADA-238	ENST00000639603	WASHC2A	Q641Q2	1341 aa		10.48	□□□□□ -0.73
STRADA-238	ENST00000639603	KDM6A	O15550	1401 aa	Predicted RBP	10.48	□□□□□ -0.73
STRADA-238	ENST00000639603	ARFGEF2	Q9Y6D5	1785 aa		10.47	□□□□□ -0.73
STRADA-238	ENST00000639603	FER1L6	Q2WGJ9	1857 aa		10.47	□□□□□ -0.73
STRADA-238	ENST00000639603	ERVV-2	B6SEH9	535 aa		10.47	□□□□□ -0.73
STRADA-238	ENST00000639603	HSP90AB1	P08238	724 aa	Known RBP	10.47	□□□□□ -0.73
STRADA-238	ENST00000639603	KCNA3	P22001	575 aa		10.47	□□□□□ -0.73
STRADA-238	ENST00000639603	RRAGC	Q9HB90	399 aa		10.46	□□□□□ -0.73
STRADA-238	ENST00000639603	HSPA1A	P0DMV8	641 aa	Known RBP	10.45	□□□□□ -0.74
STRADA-238	ENST00000639603	HSPA1B	P0DMV9	641 aa	Known RBP	10.45	□□□□□ -0.74
STRADA-238	ENST00000639603	EYA1	Q99502	592 aa		10.45	□□□□□ -0.74
STRADA-238	ENST00000639603	SCN4A	P35499	1836 aa		10.44	□□□□□ -0.74
STRADA-238	ENST00000639603	USP42	Q9H9J4	1324 aa	Known RBP	10.44	□□□□□ -0.74
STRADA-238	ENST00000639603	PPM1G	O15355	546 aa	Predicted RBP	10.44	□□□□□ -0.74
STRADA-238	ENST00000639603	VEGFA	P15692	232 aa	Predicted RBP	10.44	□□□□□ -0.74
STRADA-238	ENST00000639603	SLC4A9	Q96Q91	983 aa		10.44	□□□□□ -0.74
STRADA-238	ENST00000639603	ANKRD31	Q8N7Z5	1873 aa		10.44	□□□□□ -0.74
STRADA-238	ENST00000639603	UBR2	Q8IWV8	1755 aa		10.43	□□□□□ -0.74
STRADA-238	ENST00000639603	COL11A2	P13942	1736 aa	Predicted RBP	10.42	□□□□□ -0.74
STRADA-238	ENST00000639603	SCN7A	Q01118	1682 aa		10.42	□□□□□ -0.74
STRADA-238	ENST00000639603	GLTPD2	A6NH11	291 aa		10.42	□□□□□ -0.74
STRADA-238	ENST00000639603	LMNB1	P20700	586 aa		10.42	□□□□□ -0.74
STRADA-238	ENST00000639603	CRKL	P46109	303 aa	Known RBP	10.42	□□□□□ -0.74
STRADA-238	ENST00000639603	VASP	P50552	380 aa	Predicted RBP	10.42	□□□□□ -0.74
STRADA-238	ENST00000639603	CABP4	P57796	275 aa		10.41	□□□□□ -0.74
STRADA-238	ENST00000639603	DDR1	Q08345	913 aa		10.41	□□□□□ -0.74
STRADA-238	ENST00000639603	AMOT	Q4VCS5	1084 aa		10.41	□□□□□ -0.74
STRADA-238	ENST00000639603	POLRMT	O00411	1230 aa	Known RBP	10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	CHRNA5	P30532	468 aa		10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	RASSF7	Q02833	373 aa		10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	EIF4A2	Q14240	407 aa	Known RBP	10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	CARD14	Q9BXL6	1004 aa		10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	SRP68	Q9UHB9	627 aa	Known RBP	10.4	□□□□□ -0.74
STRADA-238	ENST00000639603	MRC1	P22897	1456 aa		10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	PITPNM1	O00562	1244 aa		10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	PTCD1	O75127	700 aa	Known RBP	10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	ZPR1	O75312	459 aa		10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	C1orf141	Q5JVX7	400 aa		10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	POLK	Q9UBT6	870 aa		10.39	□□□□□ -0.75
STRADA-238	ENST00000639603	TM4SF1	P30408	202 aa		10.38	□□□□□ -0.75
STRADA-238	ENST00000639603	DPY19L2	Q6NUT2	758 aa		10.38	□□□□□ -0.75
STRADA-238	ENST00000639603	CREBZF	Q9NS37	354 aa		10.38	□□□□□ -0.75
STRADA-238	ENST00000639603	BCOR	Q6W2J9	1755 aa		10.38	□□□□□ -0.75
STRADA-238	ENST00000639603	COL15A1	P39059	1388 aa		10.38	□□□□□ -0.75
STRADA-238	ENST00000639603	MTHFS	P49914	203 aa		10.37	□□□□□ -0.75
STRADA-238	ENST00000639603	TTLL6	Q8N841	843 aa		10.37	□□□□□ -0.75
STRADA-238	ENST00000639603	SOS1	Q07889	1333 aa	Predicted RBP	10.36	□□□□□ -0.75
STRADA-238	ENST00000639603	SIPA1L3	O60292	1781 aa	Predicted RBP	10.36	□□□□□ -0.75
STRADA-238	ENST00000639603	SLX4	Q8IY92	1834 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603		H0YIN7	160 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	NFKBIE	O00221	500 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	USPL1	Q5W0Q7	1092 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	INTS5	Q6P9B9	1019 aa	Known RBP	10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	NFATC2IP	Q8NCF5	419 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	PRDM10	Q9NQV6	1147 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	NARF	Q9UHQ1	456 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	PDZRN3	Q9UPQ7	1066 aa		10.35	□□□□□ -0.75
STRADA-238	ENST00000639603	ADAMTSL1	Q8N6G6	1762 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	TRPM7	Q96QT4	1865 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	THSD7B	Q9C0I4	1608 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	SLC34A2	O95436	690 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	NFIX	Q14938	502 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	CHADL	Q6NUI6	762 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	CNTNAP1	P78357	1384 aa		10.34	□□□□□ -0.75
STRADA-238	ENST00000639603	LTBP3	Q9NS15	1303 aa		10.33	□□□□□ -0.76
STRADA-238	ENST00000639603	POTEC	B2RU33	542 aa		10.33	□□□□□ -0.76
STRADA-238	ENST00000639603	SERPINB2	P05120	415 aa		10.33	□□□□□ -0.76
STRADA-238	ENST00000639603	C2CD5	Q86YS7	1000 aa		10.33	□□□□□ -0.76
STRADA-238	ENST00000639603	AIDA	Q96BJ3	306 aa		10.33	□□□□□ -0.76
STRADA-238	ENST00000639603	CLEC11A	Q9Y240	323 aa		10.33	□□□□□ -0.76
STRADA-238	ENST00000639603	CARMIL3	Q8ND23	1372 aa		10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	CYP19A1	P11511	503 aa	Predicted RBP	10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	TNNT2	P45379	298 aa	Predicted RBP	10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	CTCF	P49711	727 aa	Predicted RBP	10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	ERFE	Q4G0M1	354 aa		10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	DNAJC10	Q8IXB1	793 aa		10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	MKRN1	Q9UHC7	482 aa	Known RBP	10.32	□□□□□ -0.76
STRADA-238	ENST00000639603	IQCA1L	A6NCM1	817 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	FOXN1	O15353	648 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	PRR29	P0C7W0	189 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	PDE6B	P35913	854 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	AKAP4	Q5JQC9	854 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	SOGA3	Q5TF21	947 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	VSIG10	Q8N0Z9	540 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	SLC52A2	Q9HAB3	445 aa		10.31	□□□□□ -0.76
STRADA-238	ENST00000639603	LDHD	Q86WU2	507 aa		10.3	□□□□□ -0.76
STRADA-238	ENST00000639603	TAOK3	Q9H2K8	898 aa		10.3	□□□□□ -0.76
STRADA-238	ENST00000639603	BCL2L12	Q9HB09	334 aa		10.3	□□□□□ -0.76
STRADA-238	ENST00000639603	ZBTB1	Q9Y2K1	713 aa		10.3	□□□□□ -0.76
STRADA-238	ENST00000639603	PASK	Q96RG2	1323 aa		10.3	□□□□□ -0.76
STRADA-238	ENST00000639603		A0A087WZG4	1122 aa		10.29	□□□□□ -0.76
STRADA-238	ENST00000639603	SULT6B1	Q6IMI4	303 aa		10.29	□□□□□ -0.76
STRADA-238	ENST00000639603	AEBP1	Q8IUX7	1158 aa		10.29	□□□□□ -0.76
STRADA-238	ENST00000639603	BRIP1	Q9BX63	1249 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms