RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 C1QTNF9BB2RNN3 333 aa8.91□□□□□ -0.98
CCDC7-214ENST00000639453 CHSY3Q70JA7 882 aa8.91□□□□□ -0.98
CCDC7-214ENST00000639453 PHTF2Q8N3S3 785 aa8.91□□□□□ -0.98
CCDC7-214ENST00000639453 SPDYE3A6NKU9 549 aa8.9□□□□□ -0.98
CCDC7-214ENST00000639453 SMTNP53814 917 aa8.9□□□□□ -0.98
CCDC7-214ENST00000639453 FAM182BQ5T319 152 aa8.9□□□□□ -0.98
CCDC7-214ENST00000639453 SUV39H2Q9H5I1 410 aa8.9□□□□□ -0.98
CCDC7-214ENST00000639453 A0A1W2PNR3 127 aa8.89□□□□□ -0.99
CCDC7-214ENST00000639453 KHNYNO15037 678 aaKnown RBP8.89□□□□□ -0.99
CCDC7-214ENST00000639453 ALAS2P22557 587 aa8.89□□□□□ -0.99
CCDC7-214ENST00000639453 DGKGP49619 791 aa8.89□□□□□ -0.99
CCDC7-214ENST00000639453 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
CCDC7-214ENST00000639453 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
CCDC7-214ENST00000639453 TSGA10IPQ3SY00 556 aa8.89□□□□□ -0.99
CCDC7-214ENST00000639453 DCDC2BA2VCK2 349 aa8.88□□□□□ -0.99
CCDC7-214ENST00000639453 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
CCDC7-214ENST00000639453 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
CCDC7-214ENST00000639453 BICDL1Q6ZP65 573 aa8.88□□□□□ -0.99
CCDC7-214ENST00000639453 STAU1O95793 577 aaKnown RBP8.87□□□□□ -0.99
CCDC7-214ENST00000639453 TNP2Q05952 138 aa8.87□□□□□ -0.99
CCDC7-214ENST00000639453 CD163Q86VB7 1156 aa8.87□□□□□ -0.99
CCDC7-214ENST00000639453 Q8N3U1 123 aa8.87□□□□□ -0.99
CCDC7-214ENST00000639453 NEUROD4Q9HD90 331 aa8.87□□□□□ -0.99
CCDC7-214ENST00000639453 DNAAF2Q9NVR5 837 aaKnown RBP8.87□□□□□ -0.99
CCDC7-214ENST00000639453 ZDHHC3Q9NYG2 299 aa8.87□□□□□ -0.99
CCDC7-214ENST00000639453 CABP1Q9NZU7 370 aa8.87□□□□□ -0.99
CCDC7-214ENST00000639453 CDK2AP1O14519 115 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 BACH1O14867 736 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 CD33P20138 364 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 ATP4AP20648 1035 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 SOX11P35716 441 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 SCNN1DP51172 638 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
CCDC7-214ENST00000639453 HOXB4P17483 251 aaPredicted RBP8.85□□□□□ -0.99
CCDC7-214ENST00000639453 VAC14Q08AM6 782 aa8.85□□□□□ -0.99
CCDC7-214ENST00000639453 MARK1Q9P0L2 795 aa8.85□□□□□ -0.99
CCDC7-214ENST00000639453 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
CCDC7-214ENST00000639453 A6NJY4 79 aa8.84□□□□□ -0.99
CCDC7-214ENST00000639453 SPATA31C1P0DKV0 1188 aa8.84□□□□□ -0.99
CCDC7-214ENST00000639453 LAMC2Q13753 1193 aa8.84□□□□□ -0.99
CCDC7-214ENST00000639453 PRRT3Q5FWE3 981 aa8.84□□□□□ -0.99
CCDC7-214ENST00000639453 FAM157BP0CG42 384 aa8.83□□□□□ -1
CCDC7-214ENST00000639453 ABL2P42684 1182 aa8.83□□□□□ -1
CCDC7-214ENST00000639453 CHRNA4P43681 627 aa8.83□□□□□ -1
CCDC7-214ENST00000639453 GATA4P43694 442 aa8.83□□□□□ -1
CCDC7-214ENST00000639453 ZNF468Q5VIY5 522 aaPredicted RBP8.83□□□□□ -1
CCDC7-214ENST00000639453 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
CCDC7-214ENST00000639453 PLVAPQ9BX97 442 aa8.83□□□□□ -1
CCDC7-214ENST00000639453 PCBP4P57723 403 aaKnown RBP8.82□□□□□ -1
CCDC7-214ENST00000639453 NEUROD1Q13562 356 aa8.82□□□□□ -1
CCDC7-214ENST00000639453 IRF5Q13568 498 aa8.82□□□□□ -1
CCDC7-214ENST00000639453 SEMA6BQ9H3T3 888 aa8.82□□□□□ -1
CCDC7-214ENST00000639453 APBA3O96018 575 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 DOC2BQ14184 412 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 EML3Q32P44 896 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 SAMD5Q5TGI4 173 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 WWC1Q8IX03 1113 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 ZIC5Q96T25 663 aa8.81□□□□□ -1
CCDC7-214ENST00000639453 ELOA3CA0A087WX78 387 aaPredicted RBP8.8□□□□□ -1
CCDC7-214ENST00000639453 ELOA3DA6NLF2 546 aaPredicted RBP8.8□□□□□ -1
CCDC7-214ENST00000639453 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
CCDC7-214ENST00000639453 PSME1Q06323 249 aa8.8□□□□□ -1
CCDC7-214ENST00000639453 MTFR1Q15390 333 aa8.8□□□□□ -1
CCDC7-214ENST00000639453 ELOA3BQ3SY89 546 aa8.8□□□□□ -1
CCDC7-214ENST00000639453 ELOA3Q8NG57 546 aa8.8□□□□□ -1
CCDC7-214ENST00000639453 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
CCDC7-214ENST00000639453 NOD1Q9Y239 953 aa8.8□□□□□ -1
CCDC7-214ENST00000639453 NACC1Q96RE7 527 aa8.78□□□□□ -1
CCDC7-214ENST00000639453 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
CCDC7-214ENST00000639453 SYT9Q86SS6 491 aa8.77□□□□□ -1.01
CCDC7-214ENST00000639453 KLF15Q9UIH9 416 aa8.77□□□□□ -1.01
CCDC7-214ENST00000639453 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
CCDC7-214ENST00000639453 IQSEC3Q9UPP2 1182 aaPredicted RBP8.77□□□□□ -1.01
CCDC7-214ENST00000639453 CHMP3Q9Y3E7 222 aa8.77□□□□□ -1.01
CCDC7-214ENST00000639453 GPC6Q9Y625 555 aaPredicted RBP8.77□□□□□ -1.01
CCDC7-214ENST00000639453 ZMYM1Q5SVZ6 1142 aa8.76□□□□□ -1.01
CCDC7-214ENST00000639453 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
CCDC7-214ENST00000639453 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
CCDC7-214ENST00000639453 SIN3BO75182 1162 aa8.75□□□□□ -1.01
CCDC7-214ENST00000639453 TRIM28Q13263 835 aaKnown RBP8.75□□□□□ -1.01
CCDC7-214ENST00000639453 L3MBTL2Q969R5 705 aa8.75□□□□□ -1.01
CCDC7-214ENST00000639453 SCHIP1Q9P0W5 487 aaPredicted RBP8.75□□□□□ -1.01
CCDC7-214ENST00000639453 SCO2A0A1W2PP80 73 aa8.74□□□□□ -1.01
CCDC7-214ENST00000639453 EFSO43281 561 aa8.74□□□□□ -1.01
CCDC7-214ENST00000639453 SKIP12755 728 aa8.74□□□□□ -1.01
CCDC7-214ENST00000639453 LRRC69Q6ZNQ3 347 aa8.74□□□□□ -1.01
CCDC7-214ENST00000639453 PCDHGA11Q9Y5H2 935 aa8.74□□□□□ -1.01
CCDC7-214ENST00000639453 NOS2P35228 1153 aa8.73□□□□□ -1.01
CCDC7-214ENST00000639453 GTF2IP78347 998 aa8.73□□□□□ -1.01
CCDC7-214ENST00000639453 TEAD4Q15561 434 aa8.73□□□□□ -1.01
CCDC7-214ENST00000639453 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
CCDC7-214ENST00000639453 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
CCDC7-214ENST00000639453 SERTM1A2A2V5 107 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 ADARB2-AS1A8MUL3 147 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 M0R082 166 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 TXLNAP40222 546 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 TRIM50Q86XT4 487 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms