RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 SHPRHQ149N8 1683 aa10.41□□□□□ -0.74
NECAP1-214ENST00000639038 NGEFQ8N5V2 710 aa10.41□□□□□ -0.74
NECAP1-214ENST00000639038 KCNH5Q8NCM2 988 aa10.41□□□□□ -0.74
NECAP1-214ENST00000639038 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
NECAP1-214ENST00000639038 NFAT5O94916 1531 aa10.4□□□□□ -0.74
NECAP1-214ENST00000639038 KIF24Q5T7B8 1368 aa10.4□□□□□ -0.74
NECAP1-214ENST00000639038 MED1Q15648 1581 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-214ENST00000639038 KCNA1Q09470 495 aa10.4□□□□□ -0.74
NECAP1-214ENST00000639038 HELBQ8NG08 1087 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-214ENST00000639038 EMILIN1Q9Y6C2 1016 aa10.4□□□□□ -0.74
NECAP1-214ENST00000639038 ZRANB2O95218 330 aaKnown RBP eCLIP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 ANP32AP39687 249 aaKnown RBP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 SSR1P43307 286 aaKnown RBP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 FLIIQ13045 1269 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 RRS1Q15050 365 aaKnown RBP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 PMM1Q92871 262 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 PPP1R1BQ9UD71 204 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 PEAK1Q9H792 1746 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 CRYBG1Q9Y4K1 1723 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 FAM43AQ8N2R8 423 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 CDCA7Q9BWT1 371 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-214ENST00000639038 ARHGEF10LQ9HCE6 1279 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 MAP3K19Q56UN5 1328 aa10.39□□□□□ -0.75
NECAP1-214ENST00000639038 GCP02774 474 aa10.38□□□□□ -0.75
NECAP1-214ENST00000639038 TAF3Q5VWG9 929 aa10.38□□□□□ -0.75
NECAP1-214ENST00000639038 PHRF1Q9P1Y6 1649 aaKnown RBP10.38□□□□□ -0.75
NECAP1-214ENST00000639038 UBAP1LF5GYI3 381 aa10.38□□□□□ -0.75
NECAP1-214ENST00000639038 CCDC97Q96F63 343 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-214ENST00000639038 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 DIAPH1O60610 1272 aaKnown RBP10.37□□□□□ -0.75
NECAP1-214ENST00000639038 SPOCK3Q9BQ16 436 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 YY1AP1Q9H869 796 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 BSDC1Q9NW68 430 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-214ENST00000639038 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 FLT4P35916 1363 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-214ENST00000639038 BLMP54132 1417 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-214ENST00000639038 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 LRRC59Q96AG4 307 aaKnown RBP10.37□□□□□ -0.75
NECAP1-214ENST00000639038 LTN1O94822 1766 aa10.37□□□□□ -0.75
NECAP1-214ENST00000639038 IL13P35225 146 aa10.36□□□□□ -0.75
NECAP1-214ENST00000639038 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
NECAP1-214ENST00000639038 GEMIN8Q9NWZ8 242 aaKnown RBP10.36□□□□□ -0.75
NECAP1-214ENST00000639038 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-214ENST00000639038 PHLPP1O60346 1717 aa10.36□□□□□ -0.75
NECAP1-214ENST00000639038 PARNO95453 639 aaKnown RBP10.36□□□□□ -0.75
NECAP1-214ENST00000639038 AMPHP49418 695 aa10.36□□□□□ -0.75
NECAP1-214ENST00000639038 ZKSCAN8Q15776 578 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-214ENST00000639038 GPATCH3Q96I76 525 aa10.36□□□□□ -0.75
NECAP1-214ENST00000639038 CCDC85AQ96PX6 553 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-214ENST00000639038 SERPINA10Q9UK55 444 aa10.36□□□□□ -0.75
NECAP1-214ENST00000639038 COL16A1Q07092 1604 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-214ENST00000639038 HOXC9P31274 260 aa10.35□□□□□ -0.75
NECAP1-214ENST00000639038 IP6K1Q92551 441 aa10.35□□□□□ -0.75
NECAP1-214ENST00000639038 KDM4CQ9H3R0 1056 aa10.35□□□□□ -0.75
NECAP1-214ENST00000639038 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
NECAP1-214ENST00000639038 COL22A1Q8NFW1 1626 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-214ENST00000639038 CCDC194A0A1B0GVG4 234 aa10.34□□□□□ -0.75
NECAP1-214ENST00000639038 PUS10Q3MIT2 529 aaKnown RBP10.34□□□□□ -0.75
NECAP1-214ENST00000639038 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
NECAP1-214ENST00000639038 PDCL3Q9H2J4 239 aa10.34□□□□□ -0.75
NECAP1-214ENST00000639038 ABCA3Q99758 1704 aa10.34□□□□□ -0.75
NECAP1-214ENST00000639038 CPDO75976 1380 aa10.34□□□□□ -0.75
NECAP1-214ENST00000639038 ABCC6O95255 1503 aa10.34□□□□□ -0.75
NECAP1-214ENST00000639038 EIF4A2Q14240 407 aaKnown RBP10.34□□□□□ -0.75
NECAP1-214ENST00000639038 STK10O94804 968 aaKnown RBP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 BDNFP23560 247 aa10.33□□□□□ -0.76
NECAP1-214ENST00000639038 CABLES1Q8TDN4 633 aa10.33□□□□□ -0.76
NECAP1-214ENST00000639038 CEP126Q9P2H0 1117 aa10.33□□□□□ -0.76
NECAP1-214ENST00000639038 U2AF1L5P0DN76 240 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 U2AF1Q01081 240 aaKnown RBP eCLIP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 SMAP1Q8IYB5 467 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 ZCRB1Q8TBF4 217 aaKnown RBP10.33□□□□□ -0.76
NECAP1-214ENST00000639038 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
NECAP1-214ENST00000639038 COL18A1P39060 1754 aa10.33□□□□□ -0.76
NECAP1-214ENST00000639038 U2SURPO15042 1029 aaKnown RBP10.32□□□□□ -0.76
NECAP1-214ENST00000639038 ZMYND10O75800 440 aa10.32□□□□□ -0.76
NECAP1-214ENST00000639038 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
NECAP1-214ENST00000639038 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
NECAP1-214ENST00000639038 FCHSD2O94868 740 aa10.32□□□□□ -0.76
NECAP1-214ENST00000639038 ZRSR2Q15696 482 aaKnown RBP10.32□□□□□ -0.76
NECAP1-214ENST00000639038 PNNQ9H307 717 aaKnown RBP10.32□□□□□ -0.76
NECAP1-214ENST00000639038 ZC3H6P61129 1189 aaKnown RBP10.31□□□□□ -0.76
NECAP1-214ENST00000639038 UTP14CQ5TAP6 766 aaKnown RBP10.31□□□□□ -0.76
NECAP1-214ENST00000639038 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
NECAP1-214ENST00000639038 COMMD10Q9Y6G5 202 aa10.31□□□□□ -0.76
NECAP1-214ENST00000639038 GYS2P54840 703 aa10.31□□□□□ -0.76
NECAP1-214ENST00000639038 TMX4Q9H1E5 349 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-214ENST00000639038 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
NECAP1-214ENST00000639038 MRVI1Q9Y6F6 885 aa10.31□□□□□ -0.76
NECAP1-214ENST00000639038 ZBED9Q6R2W3 1325 aa10.3□□□□□ -0.76
NECAP1-214ENST00000639038 SATB1Q01826 763 aa10.3□□□□□ -0.76
NECAP1-214ENST00000639038 PPP4R3BQ5MIZ7 849 aa10.3□□□□□ -0.76
NECAP1-214ENST00000639038 DNTTIP2Q5QJE6 756 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms