RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
CCDC7-211ENST00000638889 PCDHGA11Q9Y5H2 935 aa8.32□□□□□ -1.08
CCDC7-211ENST00000638889 MSTNO14793 375 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 BACH1O14867 736 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 ARAFP10398 606 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 SNRPNP63162 240 aaKnown RBP8.31□□□□□ -1.08
CCDC7-211ENST00000638889 CTBSQ01459 385 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 ALG2Q9H553 416 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 NOD1Q9Y239 953 aa8.31□□□□□ -1.08
CCDC7-211ENST00000638889 PIK3CDO00329 1044 aa8.3□□□□□ -1.08
CCDC7-211ENST00000638889 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
CCDC7-211ENST00000638889 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
CCDC7-211ENST00000638889 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
CCDC7-211ENST00000638889 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
CCDC7-211ENST00000638889 PIK3R2O00459 728 aa8.29□□□□□ -1.08
CCDC7-211ENST00000638889 ATXN7O15265 892 aaPredicted RBP8.29□□□□□ -1.08
CCDC7-211ENST00000638889 SKIP12755 728 aa8.29□□□□□ -1.08
CCDC7-211ENST00000638889 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
CCDC7-211ENST00000638889 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
CCDC7-211ENST00000638889 ITGB2P05107 769 aa8.28□□□□□ -1.08
CCDC7-211ENST00000638889 EPXP11678 715 aa8.28□□□□□ -1.08
CCDC7-211ENST00000638889 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
CCDC7-211ENST00000638889 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
CCDC7-211ENST00000638889 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
CCDC7-211ENST00000638889 RAD21O60216 631 aa8.27□□□□□ -1.09
CCDC7-211ENST00000638889 GTF2IP78347 998 aa8.27□□□□□ -1.09
CCDC7-211ENST00000638889 TNP2Q05952 138 aa8.27□□□□□ -1.09
CCDC7-211ENST00000638889 ZIC5Q96T25 663 aa8.27□□□□□ -1.09
CCDC7-211ENST00000638889 FAM157BP0CG42 384 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 MAPTP10636 758 aaKnown RBP8.26□□□□□ -1.09
CCDC7-211ENST00000638889 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
CCDC7-211ENST00000638889 AMPD1P23109 780 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 FLIIQ13045 1269 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 NCOA4Q13772 614 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 SAMD5Q5TGI4 173 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 LINC00114Q6XXX2 140 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
CCDC7-211ENST00000638889 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
CCDC7-211ENST00000638889 PROCP04070 461 aa8.25□□□□□ -1.09
CCDC7-211ENST00000638889 ADH6P28332 368 aa8.25□□□□□ -1.09
CCDC7-211ENST00000638889 ZNF358Q9NW07 568 aa8.25□□□□□ -1.09
CCDC7-211ENST00000638889 GJA3Q9Y6H8 435 aa8.25□□□□□ -1.09
CCDC7-211ENST00000638889 USP3Q9Y6I4 520 aa8.25□□□□□ -1.09
CCDC7-211ENST00000638889 DCDC2BA2VCK2 349 aa8.24□□□□□ -1.09
CCDC7-211ENST00000638889 NEURL1BA8MQ27 555 aa8.24□□□□□ -1.09
CCDC7-211ENST00000638889 KHNYNO15037 678 aaKnown RBP8.24□□□□□ -1.09
CCDC7-211ENST00000638889 PSME1Q06323 249 aa8.24□□□□□ -1.09
CCDC7-211ENST00000638889 LAMC2Q13753 1193 aa8.24□□□□□ -1.09
CCDC7-211ENST00000638889 TRIM50Q86XT4 487 aa8.24□□□□□ -1.09
CCDC7-211ENST00000638889 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
CCDC7-211ENST00000638889 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
CCDC7-211ENST00000638889 USP17L5A8MUK1 530 aa8.23□□□□□ -1.09
CCDC7-211ENST00000638889 GNB5O14775 395 aa8.23□□□□□ -1.09
CCDC7-211ENST00000638889 COL8A1P27658 744 aa8.23□□□□□ -1.09
CCDC7-211ENST00000638889 TEAD4Q15561 434 aa8.23□□□□□ -1.09
CCDC7-211ENST00000638889 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC7-211ENST00000638889 POM121Q96HA1 1249 aa8.23□□□□□ -1.09
CCDC7-211ENST00000638889 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
CCDC7-211ENST00000638889 CD33P20138 364 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 DGKGP49619 791 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 EPHA4P54764 986 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 BICDL1Q6ZP65 573 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 PLEKHM2Q8IWE5 1019 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 MARK1Q9P0L2 795 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 HCN2Q9UL51 889 aa8.22□□□□□ -1.09
CCDC7-211ENST00000638889 EFSO43281 561 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 ADAM23O75077 832 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 NOS2P35228 1153 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 ZNF468Q5VIY5 522 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-211ENST00000638889 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 NOP53Q9NZM5 478 aaKnown RBP8.21□□□□□ -1.1
CCDC7-211ENST00000638889 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CCDC7-211ENST00000638889 EML1O00423 815 aa8.2□□□□□ -1.1
CCDC7-211ENST00000638889 UBTFP17480 764 aaKnown RBP8.2□□□□□ -1.1
CCDC7-211ENST00000638889 TXLNAP40222 546 aa8.2□□□□□ -1.1
CCDC7-211ENST00000638889 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
CCDC7-211ENST00000638889 CHSY3Q70JA7 882 aa8.2□□□□□ -1.1
CCDC7-211ENST00000638889 SLC9A9Q8IVB4 645 aa8.2□□□□□ -1.1
CCDC7-211ENST00000638889 PRR12Q9ULL5 1215 aa8.2□□□□□ -1.1
CCDC7-211ENST00000638889 FCHSD1Q86WN1 690 aa8.19□□□□□ -1.1
CCDC7-211ENST00000638889 DEPDC4Q8N2C3 294 aa8.19□□□□□ -1.1
CCDC7-211ENST00000638889 SUV39H2Q9H5I1 410 aa8.19□□□□□ -1.1
CCDC7-211ENST00000638889 ZBTB7BO15156 539 aaPredicted RBP8.18□□□□□ -1.1
CCDC7-211ENST00000638889 C7orf43Q8WVR3 580 aa8.18□□□□□ -1.1
CCDC7-211ENST00000638889 ZNF232Q9UNY5 417 aa8.18□□□□□ -1.1
CCDC7-211ENST00000638889 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 USP17L3A6NCW0 530 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 USP17L4A6NCW7 530 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 POM121CA8CG34 1229 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 M0R2N6 131 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
CCDC7-211ENST00000638889 CCDC102BQ68D86 513 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 USP17L2Q6R6M4 530 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 USP17L1Q7RTZ2 530 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 TNS4Q8IZW8 715 aa8.17□□□□□ -1.1
CCDC7-211ENST00000638889 TPCN2Q8NHX9 752 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms