RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
COLCA2-206ENST00000638573 COL15A1P39059 1388 aa21.89■■□□□ 1.1
COLCA2-206ENST00000638573 DPEP1P16444 411 aa21.89■■□□□ 1.09
COLCA2-206ENST00000638573 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
COLCA2-206ENST00000638573 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
COLCA2-206ENST00000638573 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
COLCA2-206ENST00000638573 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
COLCA2-206ENST00000638573 SIPA1L3O60292 1781 aaPredicted RBP21.88■■□□□ 1.09
COLCA2-206ENST00000638573 CHD4Q14839 1912 aa21.88■■□□□ 1.09
COLCA2-206ENST00000638573 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
COLCA2-206ENST00000638573 POLRMTO00411 1230 aaKnown RBP21.87■■□□□ 1.09
COLCA2-206ENST00000638573 FCHSD2O94868 740 aa21.87■■□□□ 1.09
COLCA2-206ENST00000638573 BTBD11A6QL63 1104 aa21.86■■□□□ 1.09
COLCA2-206ENST00000638573 A1BGP04217 495 aa21.86■■□□□ 1.09
COLCA2-206ENST00000638573 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
COLCA2-206ENST00000638573 KCNA3P22001 575 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 TM4SF1P30408 202 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 NFIXQ14938 502 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 THUMPD2Q9BTF0 503 aaKnown RBP21.85■■□□□ 1.09
COLCA2-206ENST00000638573 MIS18AQ9NYP9 233 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
COLCA2-206ENST00000638573 ZPR1O75312 459 aa21.84■■□□□ 1.09
COLCA2-206ENST00000638573 CHRNA5P30532 468 aa21.84■■□□□ 1.09
COLCA2-206ENST00000638573 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
COLCA2-206ENST00000638573 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 USP16Q9Y5T5 823 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 EIF5P55010 431 aaKnown RBP21.82■■□□□ 1.08
COLCA2-206ENST00000638573 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
COLCA2-206ENST00000638573 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
COLCA2-206ENST00000638573 MYBBP1AQ9BQG0 1328 aaKnown RBP21.81■■□□□ 1.08
COLCA2-206ENST00000638573 ATP10DQ9P241 1426 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 STARD3NLO95772 234 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 TGFB2P61812 414 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 ZNF526Q8TF50 670 aaPredicted RBP21.81■■□□□ 1.08
COLCA2-206ENST00000638573 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
COLCA2-206ENST00000638573 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 CARMIL3Q8ND23 1372 aa21.8■■□□□ 1.08
COLCA2-206ENST00000638573 CCDC24Q8N4L8 307 aa21.8■■□□□ 1.08
COLCA2-206ENST00000638573 ADCY9O60503 1353 aa21.78■■□□□ 1.08
COLCA2-206ENST00000638573 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
COLCA2-206ENST00000638573 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
COLCA2-206ENST00000638573 SERPINB2P05120 415 aa21.76■■□□□ 1.07
COLCA2-206ENST00000638573 ANP32CO43423 234 aa21.75■■□□□ 1.07
COLCA2-206ENST00000638573 ARHGAP27Q6ZUM4 889 aa21.75■■□□□ 1.07
COLCA2-206ENST00000638573 NBPF26B4DH59 902 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 NBPF10Q6P3W6 841 aaKnown RBP21.74■■□□□ 1.07
COLCA2-206ENST00000638573 NBPF15Q8N660 670 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 IL6STP40189 918 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 AFDNP55196 1824 aaKnown RBP21.72■■□□□ 1.07
COLCA2-206ENST00000638573 GIGYF1O75420 1035 aaPredicted RBP21.72■■□□□ 1.07
COLCA2-206ENST00000638573 C1QTNF8P60827 252 aa21.72■■□□□ 1.07
COLCA2-206ENST00000638573 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
COLCA2-206ENST00000638573 SCN7AQ01118 1682 aa21.72■■□□□ 1.07
COLCA2-206ENST00000638573 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 PIM2Q9P1W9 311 aa21.71■■□□□ 1.07
COLCA2-206ENST00000638573 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 BRCA1P38398 1863 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
COLCA2-206ENST00000638573 A0A087WZG4 1122 aa21.7■■□□□ 1.06
COLCA2-206ENST00000638573 DLG5Q8TDM6 1919 aa21.69■■□□□ 1.06
COLCA2-206ENST00000638573 DALRD3Q5D0E6 543 aaKnown RBP21.69■■□□□ 1.06
COLCA2-206ENST00000638573 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
COLCA2-206ENST00000638573 PRR5LQ6MZQ0 368 aa21.68■■□□□ 1.06
COLCA2-206ENST00000638573 NEFMP07197 916 aa21.67■■□□□ 1.06
COLCA2-206ENST00000638573 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
COLCA2-206ENST00000638573 RASSF7Q02833 373 aa21.67■■□□□ 1.06
COLCA2-206ENST00000638573 C2CD5Q86YS7 1000 aa21.67■■□□□ 1.06
COLCA2-206ENST00000638573 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
COLCA2-206ENST00000638573 NGEFQ8N5V2 710 aa21.66■■□□□ 1.06
COLCA2-206ENST00000638573 PRELPP51888 382 aa21.65■■□□□ 1.06
COLCA2-206ENST00000638573 RIPK4P57078 832 aa21.65■■□□□ 1.06
COLCA2-206ENST00000638573 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
COLCA2-206ENST00000638573 SENP3-EIF4A1A0A087X0R7 540 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
COLCA2-206ENST00000638573 NEUROD2Q15784 382 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 HLFQ16534 295 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 FAM177BA6PVY3 158 aa21.63■■□□□ 1.05
COLCA2-206ENST00000638573 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.05
COLCA2-206ENST00000638573 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
COLCA2-206ENST00000638573 BCORQ6W2J9 1755 aa21.63■■□□□ 1.05
COLCA2-206ENST00000638573 ANKRD31Q8N7Z5 1873 aa21.62■■□□□ 1.05
COLCA2-206ENST00000638573 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
COLCA2-206ENST00000638573 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
COLCA2-206ENST00000638573 TTLL7Q6ZT98 887 aa21.61■■□□□ 1.05
COLCA2-206ENST00000638573 SETDB2Q96T68 719 aa21.61■■□□□ 1.05
COLCA2-206ENST00000638573 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
COLCA2-206ENST00000638573 COL11A2P13942 1736 aaPredicted RBP21.6■■□□□ 1.05
COLCA2-206ENST00000638573 KIF3CO14782 793 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 MYL6BP14649 208 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms