RNA–Protein interactions for RNA: ENST00000638465.1

RET-206, Transcript of ret proto-oncogene, humanhuman

TSL 5

Gene RET, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-206ENST00000638465 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
RET-206ENST00000638465 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
RET-206ENST00000638465 USPL1Q5W0Q7 1092 aa16.89■□□□□ 0.29
RET-206ENST00000638465 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
RET-206ENST00000638465 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
RET-206ENST00000638465 FMNL2Q96PY5 1086 aa16.89■□□□□ 0.29
RET-206ENST00000638465 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
RET-206ENST00000638465 COL15A1P39059 1388 aa16.89■□□□□ 0.29
RET-206ENST00000638465 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
RET-206ENST00000638465 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
RET-206ENST00000638465 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
RET-206ENST00000638465 DPEP1P16444 411 aa16.88■□□□□ 0.29
RET-206ENST00000638465 EIF5P55010 431 aaKnown RBP16.88■□□□□ 0.29
RET-206ENST00000638465 DDR1Q08345 913 aa16.88■□□□□ 0.29
RET-206ENST00000638465 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
RET-206ENST00000638465 PIM2Q9P1W9 311 aa16.88■□□□□ 0.29
RET-206ENST00000638465 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
RET-206ENST00000638465 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
RET-206ENST00000638465 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
RET-206ENST00000638465 KCNA3P22001 575 aa16.86■□□□□ 0.29
RET-206ENST00000638465 GPBP1L1Q9HC44 474 aaPredicted RBP16.86■□□□□ 0.29
RET-206ENST00000638465 KIAA1551Q9HCM1 1747 aa16.85■□□□□ 0.29
RET-206ENST00000638465 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
RET-206ENST00000638465 NEFMP07197 916 aa16.85■□□□□ 0.29
RET-206ENST00000638465 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
RET-206ENST00000638465 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
RET-206ENST00000638465 NFIXQ14938 502 aa16.85■□□□□ 0.29
RET-206ENST00000638465 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
RET-206ENST00000638465 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
RET-206ENST00000638465 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
RET-206ENST00000638465 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
RET-206ENST00000638465 GOLGB1Q14789 3259 aaKnown RBP16.84■□□□□ 0.29
RET-206ENST00000638465 BCL2L12Q9HB09 334 aa16.83■□□□□ 0.28
RET-206ENST00000638465 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.28
RET-206ENST00000638465 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
RET-206ENST00000638465 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
RET-206ENST00000638465 RGL2O15211 777 aa16.81■□□□□ 0.28
RET-206ENST00000638465 SERPINB2P05120 415 aa16.81■□□□□ 0.28
RET-206ENST00000638465 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
RET-206ENST00000638465 N4BP2Q86UW6 1770 aaPredicted RBP16.81■□□□□ 0.28
RET-206ENST00000638465 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
RET-206ENST00000638465 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
RET-206ENST00000638465 RALBP1Q15311 655 aa16.79■□□□□ 0.28
RET-206ENST00000638465 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
RET-206ENST00000638465 MCM10Q7L590 875 aa16.79■□□□□ 0.28
RET-206ENST00000638465 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
RET-206ENST00000638465 ARFGEF1Q9Y6D6 1849 aa16.78■□□□□ 0.28
RET-206ENST00000638465 A1BGP04217 495 aa16.78■□□□□ 0.28
RET-206ENST00000638465 CLEC4GQ6UXB4 293 aa16.78■□□□□ 0.28
RET-206ENST00000638465 NRXN2Q9P2S2 1712 aa16.78■□□□□ 0.28
RET-206ENST00000638465 KCNQ3O43525 872 aa16.77■□□□□ 0.28
RET-206ENST00000638465 CHRNA5P30532 468 aa16.77■□□□□ 0.28
RET-206ENST00000638465 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
RET-206ENST00000638465 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
RET-206ENST00000638465 H0YIN7 160 aa16.76■□□□□ 0.27
RET-206ENST00000638465 CAMTA2O94983 1202 aa16.76■□□□□ 0.27
RET-206ENST00000638465 TTLL6Q8N841 843 aa16.76■□□□□ 0.27
RET-206ENST00000638465 PLEKHF1Q96S99 279 aa16.76■□□□□ 0.27
RET-206ENST00000638465 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
RET-206ENST00000638465 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
RET-206ENST00000638465 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
RET-206ENST00000638465 ZC3H4Q9UPT8 1303 aaKnown RBP16.75■□□□□ 0.27
RET-206ENST00000638465 PDE6BP35913 854 aa16.75■□□□□ 0.27
RET-206ENST00000638465 C9orf131Q5VYM1 1079 aa16.75■□□□□ 0.27
RET-206ENST00000638465 TBC1D9BQ66K14 1250 aa16.75■□□□□ 0.27
RET-206ENST00000638465 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
RET-206ENST00000638465 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
RET-206ENST00000638465 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
RET-206ENST00000638465 ZNF330Q9Y3S2 320 aaPredicted RBP16.75■□□□□ 0.27
RET-206ENST00000638465 KIF3CO14782 793 aa16.74■□□□□ 0.27
RET-206ENST00000638465 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
RET-206ENST00000638465 C2CD5Q86YS7 1000 aa16.74■□□□□ 0.27
RET-206ENST00000638465 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
RET-206ENST00000638465 DCTN1Q14203 1278 aa16.73■□□□□ 0.27
RET-206ENST00000638465 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
RET-206ENST00000638465 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
RET-206ENST00000638465 PRR5LQ6MZQ0 368 aa16.72■□□□□ 0.27
RET-206ENST00000638465 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
RET-206ENST00000638465 CNBD1Q8NA66 436 aa16.71■□□□□ 0.27
RET-206ENST00000638465 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
RET-206ENST00000638465 TOMM70O94826 608 aa16.7■□□□□ 0.26
RET-206ENST00000638465 HSPA6P17066 643 aa16.7■□□□□ 0.26
RET-206ENST00000638465 ST5P78524 1137 aa16.7■□□□□ 0.26
RET-206ENST00000638465 BABAM1Q9NWV8 329 aa16.7■□□□□ 0.26
RET-206ENST00000638465 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
RET-206ENST00000638465 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
RET-206ENST00000638465 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
RET-206ENST00000638465 LMNB1P20700 586 aa16.69■□□□□ 0.26
RET-206ENST00000638465 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
RET-206ENST00000638465 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
RET-206ENST00000638465 CNKSR1Q969H4 720 aa16.69■□□□□ 0.26
RET-206ENST00000638465 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
RET-206ENST00000638465 NPHP1O15259 732 aa16.68■□□□□ 0.26
RET-206ENST00000638465 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
RET-206ENST00000638465 LMOD3Q0VAK6 560 aa16.68■□□□□ 0.26
RET-206ENST00000638465 STYK1Q6J9G0 422 aa16.68■□□□□ 0.26
RET-206ENST00000638465 TPTE2Q6XPS3 522 aa16.68■□□□□ 0.26
RET-206ENST00000638465 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
RET-206ENST00000638465 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
RET-206ENST00000638465 ERVV-1B6SEH8 477 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms