RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
LINC00598-216ENST00000638163 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
LINC00598-216ENST00000638163 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
LINC00598-216ENST00000638163 CRBNQ96SW2 442 aa13.07□□□□□ -0.32
LINC00598-216ENST00000638163 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
LINC00598-216ENST00000638163 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
LINC00598-216ENST00000638163 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
LINC00598-216ENST00000638163 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
LINC00598-216ENST00000638163 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
LINC00598-216ENST00000638163 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
LINC00598-216ENST00000638163 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
LINC00598-216ENST00000638163 PIGBQ92521 554 aa13.05□□□□□ -0.32
LINC00598-216ENST00000638163 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
LINC00598-216ENST00000638163 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
LINC00598-216ENST00000638163 KCNQ3O43525 872 aa13.04□□□□□ -0.32
LINC00598-216ENST00000638163 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
LINC00598-216ENST00000638163 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
LINC00598-216ENST00000638163 PANK1Q8TE04 598 aa13.04□□□□□ -0.32
LINC00598-216ENST00000638163 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
LINC00598-216ENST00000638163 COG6Q9Y2V7 657 aa13.04□□□□□ -0.32
LINC00598-216ENST00000638163 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
LINC00598-216ENST00000638163 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
LINC00598-216ENST00000638163 TMEM57Q8N5G2 664 aa13.03□□□□□ -0.32
LINC00598-216ENST00000638163 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
LINC00598-216ENST00000638163 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
LINC00598-216ENST00000638163 NHSQ6T4R5 1651 aa13.02□□□□□ -0.32
LINC00598-216ENST00000638163 ITGB4P16144 1822 aa13.02□□□□□ -0.32
LINC00598-216ENST00000638163 GNAI3P08754 354 aa13.02□□□□□ -0.33
LINC00598-216ENST00000638163 RLBP1P12271 317 aa13.02□□□□□ -0.33
LINC00598-216ENST00000638163 CENPQQ7L2Z9 268 aaPredicted RBP13.02□□□□□ -0.33
LINC00598-216ENST00000638163 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
LINC00598-216ENST00000638163 N4BP2Q86UW6 1770 aaPredicted RBP13.02□□□□□ -0.33
LINC00598-216ENST00000638163 RGL2O15211 777 aa13.01□□□□□ -0.33
LINC00598-216ENST00000638163 ALDH1L1O75891 902 aa13.01□□□□□ -0.33
LINC00598-216ENST00000638163 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
LINC00598-216ENST00000638163 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
LINC00598-216ENST00000638163 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
LINC00598-216ENST00000638163 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
LINC00598-216ENST00000638163 ZBTB40Q9NUA8 1239 aa13.01□□□□□ -0.33
LINC00598-216ENST00000638163 PALLDQ8WX93 1383 aa13□□□□□ -0.33
LINC00598-216ENST00000638163 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
LINC00598-216ENST00000638163 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
LINC00598-216ENST00000638163 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00598-216ENST00000638163 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
LINC00598-216ENST00000638163 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
LINC00598-216ENST00000638163 C5P01031 1676 aa12.99□□□□□ -0.33
LINC00598-216ENST00000638163 ZBTB7BO15156 539 aaPredicted RBP12.99□□□□□ -0.33
LINC00598-216ENST00000638163 SRCIN1Q9C0H9 1055 aa12.99□□□□□ -0.33
LINC00598-216ENST00000638163 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
LINC00598-216ENST00000638163 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
LINC00598-216ENST00000638163 TCERG1O14776 1098 aaKnown RBP12.98□□□□□ -0.33
LINC00598-216ENST00000638163 SIK1P57059 783 aa12.98□□□□□ -0.33
LINC00598-216ENST00000638163 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
LINC00598-216ENST00000638163 PDIA6Q15084 440 aa12.98□□□□□ -0.33
LINC00598-216ENST00000638163 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
LINC00598-216ENST00000638163 PLBD2Q8NHP8 589 aa12.98□□□□□ -0.33
LINC00598-216ENST00000638163 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
LINC00598-216ENST00000638163 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
LINC00598-216ENST00000638163 HMMRO75330 724 aa12.97□□□□□ -0.33
LINC00598-216ENST00000638163 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
LINC00598-216ENST00000638163 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
LINC00598-216ENST00000638163 G2E3Q7L622 706 aa12.97□□□□□ -0.33
LINC00598-216ENST00000638163 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
LINC00598-216ENST00000638163 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
LINC00598-216ENST00000638163 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
LINC00598-216ENST00000638163 EP400Q96L91 3159 aa12.96□□□□□ -0.33
LINC00598-216ENST00000638163 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
LINC00598-216ENST00000638163 HSP90AB3PQ58FF7 597 aa12.96□□□□□ -0.33
LINC00598-216ENST00000638163 SLC4A10Q6U841 1118 aa12.96□□□□□ -0.33
LINC00598-216ENST00000638163 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
LINC00598-216ENST00000638163 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
LINC00598-216ENST00000638163 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
LINC00598-216ENST00000638163 ADCY9O60503 1353 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 A0A087WZG4 1122 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 GNAI2P04899 355 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 CYP19A1P11511 503 aaPredicted RBP12.95□□□□□ -0.34
LINC00598-216ENST00000638163 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
LINC00598-216ENST00000638163 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 XAGE3Q8WTP9 111 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 ACSBG1Q96GR2 724 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 METTL22Q9BUU2 404 aaPredicted RBP12.95□□□□□ -0.34
LINC00598-216ENST00000638163 MAP3K2Q9Y2U5 619 aa12.95□□□□□ -0.34
LINC00598-216ENST00000638163 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 ERVV-1B6SEH8 477 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 SLC27A3Q5K4L6 730 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 COL15A1P39059 1388 aa12.94□□□□□ -0.34
LINC00598-216ENST00000638163 TJP1Q07157 1748 aa12.93□□□□□ -0.34
LINC00598-216ENST00000638163 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
LINC00598-216ENST00000638163 RREB1Q92766 1687 aa12.93□□□□□ -0.34
LINC00598-216ENST00000638163 UBTFL1P0CB47 393 aaPredicted RBP12.93□□□□□ -0.34
LINC00598-216ENST00000638163 MYL6BP14649 208 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms