RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	EMILIN1	Q9Y6C2	1016 aa		18.91	■□□□□ 0.62
CLCN2-222	ENST00000638134	CTNNA3	Q9UI47	895 aa		18.9	■□□□□ 0.62
CLCN2-222	ENST00000638134	MAP2	P11137	1827 aa	Known RBP	18.9	■□□□□ 0.62
CLCN2-222	ENST00000638134	MED1	Q15648	1581 aa	Predicted RBP	18.89	■□□□□ 0.62
CLCN2-222	ENST00000638134	IGSF3	O75054	1194 aa		18.89	■□□□□ 0.62
CLCN2-222	ENST00000638134	KCNJ4	P48050	445 aa		18.89	■□□□□ 0.62
CLCN2-222	ENST00000638134	DDX41	Q9UJV9	622 aa	Known RBP	18.89	■□□□□ 0.62
CLCN2-222	ENST00000638134	COL16A1	Q07092	1604 aa	Predicted RBP	18.89	■□□□□ 0.61
CLCN2-222	ENST00000638134	ADCY5	O95622	1261 aa		18.89	■□□□□ 0.61
CLCN2-222	ENST00000638134	USP26	Q9BXU7	913 aa		18.89	■□□□□ 0.61
CLCN2-222	ENST00000638134	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.89	■□□□□ 0.61
CLCN2-222	ENST00000638134	MTHFS	P49914	203 aa		18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	EXOSC9	Q06265	439 aa	Known RBP	18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	CREBRF	Q8IUR6	639 aa		18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	ZGPAT	Q8N5A5	531 aa	Known RBP	18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	TSPYL1	Q9H0U9	437 aa		18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	ZBTB7C	A1YPR0	619 aa		18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	ZBTB22	O15209	634 aa		18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	CFAP53	Q96M91	514 aa		18.88	■□□□□ 0.61
CLCN2-222	ENST00000638134	IL16	Q14005	1332 aa		18.87	■□□□□ 0.61
CLCN2-222	ENST00000638134	GC	P02774	474 aa		18.87	■□□□□ 0.61
CLCN2-222	ENST00000638134	LRRC59	Q96AG4	307 aa	Known RBP	18.87	■□□□□ 0.61
CLCN2-222	ENST00000638134	POLK	Q9UBT6	870 aa		18.87	■□□□□ 0.61
CLCN2-222	ENST00000638134	USP25	Q9UHP3	1055 aa		18.87	■□□□□ 0.61
CLCN2-222	ENST00000638134	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	CALCOCO1	Q9P1Z2	691 aa		18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	BRD1	O95696	1058 aa		18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	HSPA1L	P34931	641 aa		18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	ZC3H6	P61129	1189 aa	Known RBP	18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	NCBP1	Q09161	790 aa	Known RBP	18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	TERF2	Q15554	542 aa		18.86	■□□□□ 0.61
CLCN2-222	ENST00000638134	TULP2	O00295	520 aa		18.85	■□□□□ 0.61
CLCN2-222	ENST00000638134	ALDH1L2	Q3SY69	923 aa		18.85	■□□□□ 0.61
CLCN2-222	ENST00000638134	ARHGEF10	O15013	1369 aa		18.85	■□□□□ 0.61
CLCN2-222	ENST00000638134	USP54	Q70EL1	1684 aa		18.85	■□□□□ 0.61
CLCN2-222	ENST00000638134	INTS3	Q68E01	1043 aa	Known RBP	18.84	■□□□□ 0.61
CLCN2-222	ENST00000638134	MAP3K19	Q56UN5	1328 aa		18.84	■□□□□ 0.61
CLCN2-222	ENST00000638134	BRPF1	P55201	1214 aa	Predicted RBP	18.83	■□□□□ 0.61
CLCN2-222	ENST00000638134	TSR2	Q969E8	191 aa	Known RBP	18.83	■□□□□ 0.61
CLCN2-222	ENST00000638134	NFAT5	O94916	1531 aa		18.83	■□□□□ 0.61
CLCN2-222	ENST00000638134	CRYBG1	Q9Y4K1	1723 aa		18.83	■□□□□ 0.6
CLCN2-222	ENST00000638134	KDM4A	O75164	1064 aa		18.83	■□□□□ 0.6
CLCN2-222	ENST00000638134	PLCD3	Q8N3E9	789 aa		18.83	■□□□□ 0.6
CLCN2-222	ENST00000638134	SLIT3	O75094	1523 aa		18.83	■□□□□ 0.6
CLCN2-222	ENST00000638134	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.83	■□□□□ 0.6
CLCN2-222	ENST00000638134	PNPLA6	Q8IY17	1366 aa		18.82	■□□□□ 0.6
CLCN2-222	ENST00000638134	PEAK1	Q9H792	1746 aa		18.82	■□□□□ 0.6
CLCN2-222	ENST00000638134	AATK	Q6ZMQ8	1374 aa		18.82	■□□□□ 0.6
CLCN2-222	ENST00000638134	GOLGA6L6	A8MZA4	724 aa		18.82	■□□□□ 0.6
CLCN2-222	ENST00000638134	GSPT1	P15170	499 aa	Known RBP	18.82	■□□□□ 0.6
CLCN2-222	ENST00000638134	MCM2	P49736	904 aa		18.82	■□□□□ 0.6
CLCN2-222	ENST00000638134	SMTNL1	A8MU46	457 aa		18.81	■□□□□ 0.6
CLCN2-222	ENST00000638134	CCDC183	Q5T5S1	534 aa		18.81	■□□□□ 0.6
CLCN2-222	ENST00000638134	KRT222	Q8N1A0	295 aa		18.81	■□□□□ 0.6
CLCN2-222	ENST00000638134	ZNF428	Q96B54	188 aa		18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	LTN1	O94822	1766 aa		18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	ZBTB7B	O15156	539 aa	Predicted RBP	18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	HAP1	P54257	671 aa	Predicted RBP	18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	CHRNA2	Q15822	529 aa		18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	HSP90AB2P	Q58FF8	381 aa		18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	CASC1	Q6TDU7	716 aa		18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	KIF18A	Q8NI77	898 aa		18.8	■□□□□ 0.6
CLCN2-222	ENST00000638134	ABCA3	Q99758	1704 aa		18.79	■□□□□ 0.6
CLCN2-222	ENST00000638134	TTC22	Q5TAA0	569 aa		18.79	■□□□□ 0.6
CLCN2-222	ENST00000638134	KCNH5	Q8NCM2	988 aa		18.79	■□□□□ 0.6
CLCN2-222	ENST00000638134	MPND	Q8N594	471 aa		18.79	■□□□□ 0.6
CLCN2-222	ENST00000638134	KCNF1	Q9H3M0	494 aa		18.79	■□□□□ 0.6
CLCN2-222	ENST00000638134	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	NUTM2E	B1AL46	878 aa	Predicted RBP	18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	REC8	O95072	547 aa		18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	TMEM87A	Q8NBN3	555 aa		18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	INTS4	Q96HW7	963 aa	Known RBP	18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	PYCARD	Q9ULZ3	195 aa		18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	KIAA0232	Q92628	1395 aa		18.78	■□□□□ 0.6
CLCN2-222	ENST00000638134	AMPH	P49418	695 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	ARHGEF25	Q86VW2	580 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	PLEKHM2	Q8IWE5	1019 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	CHAMP1	Q96JM3	812 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	AXIN2	Q9Y2T1	843 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	CUL4A	Q13619	759 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	PAXBP1	Q9Y5B6	917 aa		18.77	■□□□□ 0.6
CLCN2-222	ENST00000638134	IRX3	P78415	501 aa	Predicted RBP	18.76	■□□□□ 0.59
CLCN2-222	ENST00000638134	ARHGAP45	Q92619	1136 aa		18.76	■□□□□ 0.59
CLCN2-222	ENST00000638134	FAM53C	Q9NYF3	392 aa		18.76	■□□□□ 0.59
CLCN2-222	ENST00000638134	MX1	P20591	662 aa		18.76	■□□□□ 0.59
CLCN2-222	ENST00000638134	HOXC9	P31274	260 aa		18.76	■□□□□ 0.59
CLCN2-222	ENST00000638134	ADAMTS2	O95450	1211 aa		18.75	■□□□□ 0.59
CLCN2-222	ENST00000638134	LTV1	Q96GA3	475 aa	Predicted RBP	18.75	■□□□□ 0.59
CLCN2-222	ENST00000638134	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.75	■□□□□ 0.59
CLCN2-222	ENST00000638134	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	HCLS1	P14317	486 aa	Predicted RBP	18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	TMX3	Q96JJ7	454 aa		18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	COL3A1	P02461	1466 aa	Predicted RBP	18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	RGPD5	Q99666	1765 aa		18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	TRIM35	Q9UPQ4	493 aa		18.74	■□□□□ 0.59
CLCN2-222	ENST00000638134	CAPN2	P17655	700 aa		18.73	■□□□□ 0.59
CLCN2-222	ENST00000638134	TMPO	P42166	694 aa	Known RBP	18.73	■□□□□ 0.59
CLCN2-222	ENST00000638134	SIRT2	Q8IXJ6	389 aa		18.73	■□□□□ 0.59

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