RNA–Protein interactions for RNA: ENST00000638106.1

CHRNA7-235, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-235ENST00000638106 TGFB2P61812 414 aa20.02■□□□□ 0.8
CHRNA7-235ENST00000638106 SRP68Q9UHB9 627 aaKnown RBP20.02■□□□□ 0.8
CHRNA7-235ENST00000638106 ZBTB1Q9Y2K1 713 aa20.02■□□□□ 0.8
CHRNA7-235ENST00000638106 COL15A1P39059 1388 aa20.02■□□□□ 0.8
CHRNA7-235ENST00000638106 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.79
CHRNA7-235ENST00000638106 NARFQ9UHQ1 456 aa20.01■□□□□ 0.79
CHRNA7-235ENST00000638106 N4BP2Q86UW6 1770 aaPredicted RBP20■□□□□ 0.79
CHRNA7-235ENST00000638106 A0A087WZG4 1122 aa20■□□□□ 0.79
CHRNA7-235ENST00000638106 FKBP8Q14318 412 aa20■□□□□ 0.79
CHRNA7-235ENST00000638106 MCM10Q7L590 875 aa20■□□□□ 0.79
CHRNA7-235ENST00000638106 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
CHRNA7-235ENST00000638106 KIAA1551Q9HCM1 1747 aa19.99■□□□□ 0.79
CHRNA7-235ENST00000638106 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
CHRNA7-235ENST00000638106 PLEKHF1Q96S99 279 aa19.99■□□□□ 0.79
CHRNA7-235ENST00000638106 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
CHRNA7-235ENST00000638106 CANXP27824 592 aaKnown RBP19.98■□□□□ 0.79
CHRNA7-235ENST00000638106 ZNF784Q8NCA9 323 aaPredicted RBP19.98■□□□□ 0.79
CHRNA7-235ENST00000638106 BRCA1P38398 1863 aaKnown RBP19.98■□□□□ 0.79
CHRNA7-235ENST00000638106 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
CHRNA7-235ENST00000638106 PXDNLA1KZ92 1463 aa19.98■□□□□ 0.79
CHRNA7-235ENST00000638106 TM4SF1P30408 202 aa19.97■□□□□ 0.79
CHRNA7-235ENST00000638106 EIF5P55010 431 aaKnown RBP19.97■□□□□ 0.79
CHRNA7-235ENST00000638106 NPM2Q86SE8 214 aaKnown RBP19.97■□□□□ 0.79
CHRNA7-235ENST00000638106 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
CHRNA7-235ENST00000638106 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
CHRNA7-235ENST00000638106 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
CHRNA7-235ENST00000638106 NFE2L2Q16236 605 aa19.96■□□□□ 0.79
CHRNA7-235ENST00000638106 KCNQ3O43525 872 aa19.95■□□□□ 0.78
CHRNA7-235ENST00000638106 DDR1Q08345 913 aa19.95■□□□□ 0.78
CHRNA7-235ENST00000638106 DCTN1Q14203 1278 aa19.95■□□□□ 0.78
CHRNA7-235ENST00000638106 PNISRQ8TF01 805 aaKnown RBP19.95■□□□□ 0.78
CHRNA7-235ENST00000638106 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
CHRNA7-235ENST00000638106 POLRMTO00411 1230 aaKnown RBP19.94■□□□□ 0.78
CHRNA7-235ENST00000638106 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
CHRNA7-235ENST00000638106 SCN7AQ01118 1682 aa19.94■□□□□ 0.78
CHRNA7-235ENST00000638106 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
CHRNA7-235ENST00000638106 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
CHRNA7-235ENST00000638106 ARFGEF1Q9Y6D6 1849 aa19.93■□□□□ 0.78
CHRNA7-235ENST00000638106 A0A0G2JLW4 131 aa19.92■□□□□ 0.78
CHRNA7-235ENST00000638106 LAMB4A4D0S4 1761 aa19.91■□□□□ 0.78
CHRNA7-235ENST00000638106 NFIXQ14938 502 aa19.91■□□□□ 0.78
CHRNA7-235ENST00000638106 BCL2L12Q9HB09 334 aa19.91■□□□□ 0.78
CHRNA7-235ENST00000638106 A1BGP04217 495 aa19.9■□□□□ 0.78
CHRNA7-235ENST00000638106 DPEP1P16444 411 aa19.9■□□□□ 0.78
CHRNA7-235ENST00000638106 WWC3Q9ULE0 1092 aa19.9■□□□□ 0.78
CHRNA7-235ENST00000638106 ZNF330Q9Y3S2 320 aaPredicted RBP19.9■□□□□ 0.78
CHRNA7-235ENST00000638106 USP16Q9Y5T5 823 aa19.9■□□□□ 0.78
CHRNA7-235ENST00000638106 BCORQ6W2J9 1755 aa19.9■□□□□ 0.78
CHRNA7-235ENST00000638106 BCS1LQ9Y276 419 aa19.89■□□□□ 0.77
CHRNA7-235ENST00000638106 SERPINB2P05120 415 aa19.88■□□□□ 0.77
CHRNA7-235ENST00000638106 LMOD3Q0VAK6 560 aa19.88■□□□□ 0.77
CHRNA7-235ENST00000638106 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
CHRNA7-235ENST00000638106 PIM2Q9P1W9 311 aa19.88■□□□□ 0.77
CHRNA7-235ENST00000638106 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHRNA7-235ENST00000638106 TBC1D2BQ9UPU7 963 aa19.87■□□□□ 0.77
CHRNA7-235ENST00000638106 DLEC1Q9Y238 1755 aa19.86■□□□□ 0.77
CHRNA7-235ENST00000638106 KCNA3P22001 575 aa19.86■□□□□ 0.77
CHRNA7-235ENST00000638106 RIPK4P57078 832 aa19.86■□□□□ 0.77
CHRNA7-235ENST00000638106 DZIP3Q86Y13 1208 aaKnown RBP19.86■□□□□ 0.77
CHRNA7-235ENST00000638106 PRAMEF22A3QJZ6 481 aa19.85■□□□□ 0.77
CHRNA7-235ENST00000638106 CAMTA2O94983 1202 aa19.85■□□□□ 0.77
CHRNA7-235ENST00000638106 MIS18AQ9NYP9 233 aa19.85■□□□□ 0.77
CHRNA7-235ENST00000638106 CARMIL3Q8ND23 1372 aa19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 RGL2O15211 777 aa19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 DALRD3Q5D0E6 543 aaKnown RBP19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 TBC1D9BQ66K14 1250 aa19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 CLEC4GQ6UXB4 293 aa19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 BICDL1Q6ZP65 573 aa19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
CHRNA7-235ENST00000638106 ADCY9O60503 1353 aa19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 RUNDC1Q96C34 613 aa19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 SETDB2Q96T68 719 aa19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 PDZRN3Q9UPQ7 1066 aa19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 ZNF652Q9Y2D9 606 aa19.83■□□□□ 0.77
CHRNA7-235ENST00000638106 GIGYF1O75420 1035 aaPredicted RBP19.82■□□□□ 0.76
CHRNA7-235ENST00000638106 ATP10DQ9P241 1426 aa19.82■□□□□ 0.76
CHRNA7-235ENST00000638106 ANKRD31Q8N7Z5 1873 aa19.82■□□□□ 0.76
CHRNA7-235ENST00000638106 CHRNA5P30532 468 aa19.81■□□□□ 0.76
CHRNA7-235ENST00000638106 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
CHRNA7-235ENST00000638106 NBPF26B4DH59 902 aa19.8■□□□□ 0.76
CHRNA7-235ENST00000638106 PIP4K2AP48426 406 aaPredicted RBP19.8■□□□□ 0.76
CHRNA7-235ENST00000638106 NBPF10Q6P3W6 841 aaKnown RBP19.8■□□□□ 0.76
CHRNA7-235ENST00000638106 NBPF15Q8N660 670 aa19.8■□□□□ 0.76
CHRNA7-235ENST00000638106 TSPYL4Q9UJ04 414 aa19.8■□□□□ 0.76
CHRNA7-235ENST00000638106 H0YIN7 160 aa19.79■□□□□ 0.76
CHRNA7-235ENST00000638106 PDE6BP35913 854 aa19.79■□□□□ 0.76
CHRNA7-235ENST00000638106 BRIP1Q9BX63 1249 aa19.79■□□□□ 0.76
CHRNA7-235ENST00000638106 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
CHRNA7-235ENST00000638106 NUP98P52948 1817 aa19.79■□□□□ 0.76
CHRNA7-235ENST00000638106 SBF1O95248 1867 aa19.78■□□□□ 0.76
CHRNA7-235ENST00000638106 NPHP1O15259 732 aa19.78■□□□□ 0.76
CHRNA7-235ENST00000638106 PRR5LQ6MZQ0 368 aa19.78■□□□□ 0.76
CHRNA7-235ENST00000638106 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
CHRNA7-235ENST00000638106 CNBD1Q8NA66 436 aa19.78■□□□□ 0.76
CHRNA7-235ENST00000638106 ERBB4Q15303 1308 aa19.77■□□□□ 0.76
CHRNA7-235ENST00000638106 ST5P78524 1137 aa19.77■□□□□ 0.76
CHRNA7-235ENST00000638106 C2CD5Q86YS7 1000 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms