RNA–Protein interactions for RNA: ENST00000637909.1

CLCN2-221, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-221ENST00000637909 KIF2CQ99661 725 aa13.05□□□□□ -0.32
CLCN2-221ENST00000637909 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
CLCN2-221ENST00000637909 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
CLCN2-221ENST00000637909 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
CLCN2-221ENST00000637909 KCNG1Q9UIX4 513 aa13.04□□□□□ -0.32
CLCN2-221ENST00000637909 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
CLCN2-221ENST00000637909 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
CLCN2-221ENST00000637909 PI4KAP2A4QPH2 592 aa13.03□□□□□ -0.32
CLCN2-221ENST00000637909 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
CLCN2-221ENST00000637909 PI4KAP1Q8N8J0 262 aa13.03□□□□□ -0.32
CLCN2-221ENST00000637909 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
CLCN2-221ENST00000637909 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
CLCN2-221ENST00000637909 GNAI3P08754 354 aa13.02□□□□□ -0.32
CLCN2-221ENST00000637909 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.32
CLCN2-221ENST00000637909 SLC39A6Q13433 755 aa13.02□□□□□ -0.32
CLCN2-221ENST00000637909 TMED8Q6PL24 325 aaPredicted RBP13.02□□□□□ -0.32
CLCN2-221ENST00000637909 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.32
CLCN2-221ENST00000637909 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
CLCN2-221ENST00000637909 TOM1O60784 492 aa13.02□□□□□ -0.33
CLCN2-221ENST00000637909 NBPF7P0C2Y1 421 aaPredicted RBP13.02□□□□□ -0.33
CLCN2-221ENST00000637909 CSB-PGBD3P0DP91 1061 aa13.02□□□□□ -0.33
CLCN2-221ENST00000637909 TICAM2Q86XR7 235 aa13.02□□□□□ -0.33
CLCN2-221ENST00000637909 ROBO1Q9Y6N7 1651 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 PDE1AP54750 535 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 GSE1Q14687 1217 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 AMOTQ4VCS5 1084 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
CLCN2-221ENST00000637909 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 ERBB3P21860 1342 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 ALS2Q96Q42 1657 aa13.01□□□□□ -0.33
CLCN2-221ENST00000637909 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
CLCN2-221ENST00000637909 TNS3Q68CZ2 1445 aa13□□□□□ -0.33
CLCN2-221ENST00000637909 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
CLCN2-221ENST00000637909 AIMP1Q12904 312 aaKnown RBP13□□□□□ -0.33
CLCN2-221ENST00000637909 ZNF592Q92610 1267 aa13□□□□□ -0.33
CLCN2-221ENST00000637909 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
CLCN2-221ENST00000637909 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 SLIT3O75094 1523 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 NHSL1Q5SYE7 1610 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CLCN2-221ENST00000637909 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
CLCN2-221ENST00000637909 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
CLCN2-221ENST00000637909 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
CLCN2-221ENST00000637909 PIP4K2AP48426 406 aaPredicted RBP12.98□□□□□ -0.33
CLCN2-221ENST00000637909 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
CLCN2-221ENST00000637909 SRGAP3O43295 1099 aa12.98□□□□□ -0.33
CLCN2-221ENST00000637909 MAP4K4O95819 1239 aaPredicted RBP12.98□□□□□ -0.33
CLCN2-221ENST00000637909 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
CLCN2-221ENST00000637909 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
CLCN2-221ENST00000637909 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 CHMP5Q9NZZ3 219 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 ADCY9O60503 1353 aa12.97□□□□□ -0.33
CLCN2-221ENST00000637909 MX1P20591 662 aa12.96□□□□□ -0.33
CLCN2-221ENST00000637909 SOS1Q07889 1333 aaPredicted RBP12.96□□□□□ -0.33
CLCN2-221ENST00000637909 MYL6BP14649 208 aa12.96□□□□□ -0.33
CLCN2-221ENST00000637909 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
CLCN2-221ENST00000637909 SNX21Q969T3 373 aa12.96□□□□□ -0.33
CLCN2-221ENST00000637909 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
CLCN2-221ENST00000637909 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
CLCN2-221ENST00000637909 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
CLCN2-221ENST00000637909 CACNA1FO60840 1977 aa12.95□□□□□ -0.34
CLCN2-221ENST00000637909 KDM3BQ7LBC6 1761 aa12.95□□□□□ -0.34
CLCN2-221ENST00000637909 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
CLCN2-221ENST00000637909 TATP17735 454 aaPredicted RBP12.95□□□□□ -0.34
CLCN2-221ENST00000637909 GZF1Q9H116 711 aaPredicted RBP12.95□□□□□ -0.34
CLCN2-221ENST00000637909 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
CLCN2-221ENST00000637909 HOXB7P09629 217 aa12.94□□□□□ -0.34
CLCN2-221ENST00000637909 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
CLCN2-221ENST00000637909 K7ELQ4 463 aaPredicted RBP12.94□□□□□ -0.34
CLCN2-221ENST00000637909 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
CLCN2-221ENST00000637909 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
CLCN2-221ENST00000637909 SALL3Q9BXA9 1300 aa12.94□□□□□ -0.34
CLCN2-221ENST00000637909 MEGF6O75095 1541 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 PRDM4Q9UKN5 801 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 PA2G4Q9UQ80 394 aaKnown RBP12.93□□□□□ -0.34
CLCN2-221ENST00000637909 AHDC1Q5TGY3 1603 aaPredicted RBP12.93□□□□□ -0.34
CLCN2-221ENST00000637909 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 PHKG2P15735 406 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 MCM4P33991 863 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
CLCN2-221ENST00000637909 OSBPL3Q9H4L5 887 aa12.93□□□□□ -0.34
CLCN2-221ENST00000637909 ERC2O15083 957 aa12.92□□□□□ -0.34
CLCN2-221ENST00000637909 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
CLCN2-221ENST00000637909 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
CLCN2-221ENST00000637909 CYP27B1O15528 508 aa12.92□□□□□ -0.34
CLCN2-221ENST00000637909 RHPN1Q8TCX5 695 aa12.92□□□□□ -0.34
CLCN2-221ENST00000637909 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
CLCN2-221ENST00000637909 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms