RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 NKX1-1Q15270 411 aaPredicted RBP27.1■■□□□ 1.93
CHRNA7-228ENST00000637519 DCTPP1Q9H773 170 aa27.1■■□□□ 1.93
CHRNA7-228ENST00000637519 BEND3Q5T5X7 828 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 FMNL2Q96PY5 1086 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 SRCIN1Q9C0H9 1055 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 MAP3K2Q9Y2U5 619 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 LRRFIP2Q9Y608 721 aaKnown RBP27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 TOGARAM1Q9Y4F4 1720 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 APBB1O00213 710 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 SEC24BO95487 1268 aa27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 DDX21Q9NR30 783 aaKnown RBP eCLIP27.09■■□□□ 1.93
CHRNA7-228ENST00000637519 PLCH1Q4KWH8 1693 aa27.08■■□□□ 1.93
CHRNA7-228ENST00000637519 UBAP1LF5GYI3 381 aa27.08■■□□□ 1.93
CHRNA7-228ENST00000637519 GNAI3P08754 354 aa27.07■■□□□ 1.92
CHRNA7-228ENST00000637519 SNRPA1P09661 255 aaKnown RBP27.07■■□□□ 1.92
CHRNA7-228ENST00000637519 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
CHRNA7-228ENST00000637519 HYPKQ9NX55 129 aa27.07■■□□□ 1.92
CHRNA7-228ENST00000637519 ERVV-2B6SEH9 535 aa27.06■■□□□ 1.92
CHRNA7-228ENST00000637519 PNMA6EA0A0J9YXQ4 647 aa27.05■■□□□ 1.92
CHRNA7-228ENST00000637519 UBTFL1P0CB47 393 aaPredicted RBP27.05■■□□□ 1.92
CHRNA7-228ENST00000637519 NBPF7P0C2Y1 421 aaPredicted RBP27.04■■□□□ 1.92
CHRNA7-228ENST00000637519 SMARCA5O60264 1052 aaPredicted RBP27.04■■□□□ 1.92
CHRNA7-228ENST00000637519 KSR2Q6VAB6 950 aa27.04■■□□□ 1.92
CHRNA7-228ENST00000637519 PTCD1O75127 700 aaKnown RBP27.03■■□□□ 1.92
CHRNA7-228ENST00000637519 CWF19L2Q2TBE0 894 aaKnown RBP27.03■■□□□ 1.92
CHRNA7-228ENST00000637519 KCPQ6ZWJ8 1503 aa27.02■■□□□ 1.92
CHRNA7-228ENST00000637519 C16orf71Q8IYS4 520 aaPredicted RBP27.02■■□□□ 1.92
CHRNA7-228ENST00000637519 XAGE3Q8WTP9 111 aa27.02■■□□□ 1.92
CHRNA7-228ENST00000637519 PAPPAQ13219 1627 aa27.01■■□□□ 1.91
CHRNA7-228ENST00000637519 HMMRO75330 724 aa27.01■■□□□ 1.91
CHRNA7-228ENST00000637519 LRP10Q7Z4F1 713 aa27.01■■□□□ 1.91
CHRNA7-228ENST00000637519 NRAPQ86VF7 1730 aa27■■□□□ 1.91
CHRNA7-228ENST00000637519 COPS6Q7L5N1 327 aa27■■□□□ 1.91
CHRNA7-228ENST00000637519 OTUD7AQ8TE49 926 aaPredicted RBP27■■□□□ 1.91
CHRNA7-228ENST00000637519 EXOC6BQ9Y2D4 811 aa27■■□□□ 1.91
CHRNA7-228ENST00000637519 UBR2Q8IWV8 1755 aa27■■□□□ 1.91
CHRNA7-228ENST00000637519 IPO9Q96P70 1041 aaKnown RBP26.99■■□□□ 1.91
CHRNA7-228ENST00000637519 TMOD3Q9NYL9 352 aa26.99■■□□□ 1.91
CHRNA7-228ENST00000637519 LAMB4A4D0S4 1761 aa26.98■■□□□ 1.91
CHRNA7-228ENST00000637519 ATP8B2P98198 1209 aa26.97■■□□□ 1.91
CHRNA7-228ENST00000637519 DDX58O95786 925 aaKnown RBP26.97■■□□□ 1.91
CHRNA7-228ENST00000637519 TNS2Q63HR2 1409 aa26.97■■□□□ 1.91
CHRNA7-228ENST00000637519 WNK3Q9BYP7 1800 aa26.96■■□□□ 1.91
CHRNA7-228ENST00000637519 RIC3Q7Z5B4 369 aa26.96■■□□□ 1.91
CHRNA7-228ENST00000637519 PIGBQ92521 554 aa26.96■■□□□ 1.91
CHRNA7-228ENST00000637519 SPATA31A1Q5TZJ5 1347 aa26.96■■□□□ 1.91
CHRNA7-228ENST00000637519 ASAP1Q9ULH1 1129 aa26.95■■□□□ 1.9
CHRNA7-228ENST00000637519 NBPF26B4DH59 902 aa26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 NBPF14Q5TI25 921 aa26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 NBPF10Q6P3W6 841 aaKnown RBP26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 PLEKHM2Q8IWE5 1019 aa26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 NBPF15Q8N660 670 aa26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 EXOC5O00471 708 aa26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 ZBTB47Q9UFB7 747 aaPredicted RBP26.94■■□□□ 1.9
CHRNA7-228ENST00000637519 IGKV5-2P06315 115 aa26.93■■□□□ 1.9
CHRNA7-228ENST00000637519 PPP1R42Q7Z4L9 355 aa26.93■■□□□ 1.9
CHRNA7-228ENST00000637519 A1BGP04217 495 aa26.93■■□□□ 1.9
CHRNA7-228ENST00000637519 C9orf78Q9NZ63 289 aaPredicted RBP26.93■■□□□ 1.9
CHRNA7-228ENST00000637519 CCDC9Q9Y3X0 531 aaKnown RBP26.93■■□□□ 1.9
CHRNA7-228ENST00000637519 ALDH1L1O75891 902 aa26.92■■□□□ 1.9
CHRNA7-228ENST00000637519 LINS1Q8NG48 757 aa26.92■■□□□ 1.9
CHRNA7-228ENST00000637519 MYD88Q99836 296 aa26.91■■□□□ 1.9
CHRNA7-228ENST00000637519 BMP2KLQ5H9B9 411 aa26.91■■□□□ 1.9
CHRNA7-228ENST00000637519 SLIT2O94813 1529 aa26.9■■□□□ 1.9
CHRNA7-228ENST00000637519 GSPT1P15170 499 aaKnown RBP26.9■■□□□ 1.9
CHRNA7-228ENST00000637519 ANKRD13DQ6ZTN6 518 aa26.9■■□□□ 1.9
CHRNA7-228ENST00000637519 SYTL4Q96C24 671 aaPredicted RBP26.9■■□□□ 1.9
CHRNA7-228ENST00000637519 ITGB4P16144 1822 aa26.9■■□□□ 1.9
CHRNA7-228ENST00000637519 SRGAP3O43295 1099 aa26.89■■□□□ 1.9
CHRNA7-228ENST00000637519 ATG3Q9NT62 314 aa26.89■■□□□ 1.9
CHRNA7-228ENST00000637519 SSH3Q8TE77 659 aa26.89■■□□□ 1.89
CHRNA7-228ENST00000637519 C8orf37Q96NL8 207 aa26.88■■□□□ 1.89
CHRNA7-228ENST00000637519 GRM8O00222 908 aa26.88■■□□□ 1.89
CHRNA7-228ENST00000637519 METTL22Q9BUU2 404 aaPredicted RBP26.88■■□□□ 1.89
CHRNA7-228ENST00000637519 IBTKQ9P2D0 1353 aaPredicted RBP26.88■■□□□ 1.89
CHRNA7-228ENST00000637519 SPATA31A5Q5VU36 1347 aa26.87■■□□□ 1.89
CHRNA7-228ENST00000637519 SPATA31A7Q8IWB4 1347 aa26.87■■□□□ 1.89
CHRNA7-228ENST00000637519 NEURL1BA8MQ27 555 aa26.87■■□□□ 1.89
CHRNA7-228ENST00000637519 POLA2Q14181 598 aa26.87■■□□□ 1.89
CHRNA7-228ENST00000637519 MFAP1P55081 439 aaKnown RBP26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 TTLL7Q6ZT98 887 aa26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 SUCLG2Q96I99 432 aa26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 NEXNQ0ZGT2 675 aa26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 DDB1Q16531 1140 aa26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 JARID2Q92833 1246 aaPredicted RBP26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 RBM42Q9BTD8 480 aaKnown RBP26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 NOP58Q9Y2X3 529 aaKnown RBP26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 BCL9O00512 1426 aa26.86■■□□□ 1.89
CHRNA7-228ENST00000637519 ARFGEF2Q9Y6D5 1785 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 ATP5J2-PTCD1G3V325 749 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 LRRCC1Q9C099 1032 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 A0A0G2JS52 829 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 TSHZ3Q63HK5 1081 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 DNAJC10Q8IXB1 793 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 KAZALD1Q96I82 304 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 NWD2Q9ULI1 1742 aa26.85■■□□□ 1.89
CHRNA7-228ENST00000637519 DOT1LQ8TEK3 1739 aa26.84■■□□□ 1.89
CHRNA7-228ENST00000637519 KAT6BQ8WYB5 2073 aa26.84■■□□□ 1.89
CHRNA7-228ENST00000637519 PRIM1P49642 420 aaKnown RBP26.84■■□□□ 1.89
CHRNA7-228ENST00000637519 TTC22Q5TAA0 569 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms