RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 SULT6B1Q6IMI4 303 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 CCDC160A6NGH7 325 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 MIPOL1Q8TD10 442 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 NAP1L3Q99457 506 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 GABPB1Q06547 395 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-242ENST00000637485 HSF2BPO75031 334 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 BRD2P25440 801 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 NOLC1Q14978 699 aaKnown RBP eCLIP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 SART3Q15020 963 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 NBPF11Q86T75 865 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 RAI14Q9P0K7 980 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 TUBB4BP68371 445 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 ANKS4BQ8N8V4 417 aa11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 AIMP1Q12904 312 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-242ENST00000637485 OPA1O60313 960 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 EIF5P55010 431 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 NSD2O96028 1365 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 VGLL3A8MV65 326 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 NFE2L2Q16236 605 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 TANGO6Q9C0B7 1094 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 ADCY5O95622 1261 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 LRCH2Q5VUJ6 765 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 CTAGE5O15320 804 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 CAVIN2O95810 425 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 TATP17735 454 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 VPS37DQ86XT2 251 aa11.24□□□□□ -0.61
CACNA1A-242ENST00000637485 MAP2K2P36507 400 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 CLNS1AP54105 237 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 DNAJC21Q5F1R6 531 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 CCDC50Q8IVM0 306 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 TAOK3Q9H2K8 898 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 TRMT1Q9NXH9 659 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 USO1O60763 962 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 NOL3O60936 208 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 CETN2P41208 172 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 MAATS1Q7Z4T9 603 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 CCDC150Q8NCX0 1101 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 TMPOP42166 694 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 SYTL4Q96C24 671 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 DRC1Q96MC2 740 aa11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 LUC7L2Q9Y383 392 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-242ENST00000637485 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 NEUROD6Q96NK8 337 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 FEZ2Q9UHY8 353 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 GOLIM4O00461 696 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 LMNTD2Q8IXW0 634 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 FSD1Q9BTV5 496 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 ANKLE2Q86XL3 938 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 NKTRP30414 1462 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 FANCAO15360 1455 aa11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 SEPT11Q9NVA2 429 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-242ENST00000637485 TCOF1Q13428 1488 aaKnown RBP11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 ATP2C2O75185 946 aa11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 SLU7O95391 586 aaKnown RBP11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 SH3BGRP55822 239 aaPredicted RBP11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 SEPT14Q6ZU15 432 aa11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 GOPCQ9HD26 462 aa11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
CACNA1A-242ENST00000637485 CKAP4Q07065 602 aaKnown RBP11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 KLHL40Q2TBA0 621 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 MAPKBP1O60336 1514 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 ATP2B1P20020 1258 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.62
CACNA1A-242ENST00000637485 SPG7Q9UQ90 795 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms