RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 ZPR1O75312 459 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 FCHSD2O94868 740 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 DPEP1P16444 411 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 TEFQ10587 303 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 ZNF496Q96IT1 587 aaPredicted RBP17.07■□□□□ 0.32
CTSD-210ENST00000637381 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
CTSD-210ENST00000637381 COL15A1P39059 1388 aa17.06■□□□□ 0.32
CTSD-210ENST00000637381 HEG1Q9ULI3 1381 aa17.06■□□□□ 0.32
CTSD-210ENST00000637381 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
CTSD-210ENST00000637381 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
CTSD-210ENST00000637381 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
CTSD-210ENST00000637381 TEX13AQ9BXU3 409 aaPredicted RBP17.06■□□□□ 0.32
CTSD-210ENST00000637381 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
CTSD-210ENST00000637381 STARD3NLO95772 234 aa17.05■□□□□ 0.32
CTSD-210ENST00000637381 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
CTSD-210ENST00000637381 WWC3Q9ULE0 1092 aa17.05■□□□□ 0.32
CTSD-210ENST00000637381 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
CTSD-210ENST00000637381 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
CTSD-210ENST00000637381 NFIXQ14938 502 aa17.03■□□□□ 0.32
CTSD-210ENST00000637381 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
CTSD-210ENST00000637381 HTATSF1O43719 755 aaKnown RBP17.02■□□□□ 0.32
CTSD-210ENST00000637381 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
CTSD-210ENST00000637381 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
CTSD-210ENST00000637381 A0A087WZG4 1122 aa17.01■□□□□ 0.31
CTSD-210ENST00000637381 BTBD11A6QL63 1104 aa17.01■□□□□ 0.31
CTSD-210ENST00000637381 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
CTSD-210ENST00000637381 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
CTSD-210ENST00000637381 KCNQ3O43525 872 aa17■□□□□ 0.31
CTSD-210ENST00000637381 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
CTSD-210ENST00000637381 GPBP1L1Q9HC44 474 aaPredicted RBP17■□□□□ 0.31
CTSD-210ENST00000637381 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
CTSD-210ENST00000637381 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
CTSD-210ENST00000637381 ARHGAP27Q6ZUM4 889 aa16.99■□□□□ 0.31
CTSD-210ENST00000637381 SCN7AQ01118 1682 aa16.99■□□□□ 0.31
CTSD-210ENST00000637381 SERPINB2P05120 415 aa16.98■□□□□ 0.31
CTSD-210ENST00000637381 MCM10Q7L590 875 aa16.98■□□□□ 0.31
CTSD-210ENST00000637381 SBF1O95248 1867 aa16.98■□□□□ 0.31
CTSD-210ENST00000637381 CHRNA5P30532 468 aa16.97■□□□□ 0.31
CTSD-210ENST00000637381 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
CTSD-210ENST00000637381 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
CTSD-210ENST00000637381 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.31
CTSD-210ENST00000637381 A1BGP04217 495 aa16.96■□□□□ 0.31
CTSD-210ENST00000637381 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
CTSD-210ENST00000637381 BCORQ6W2J9 1755 aa16.96■□□□□ 0.31
CTSD-210ENST00000637381 CEP350Q5VT06 3117 aa16.95■□□□□ 0.3
CTSD-210ENST00000637381 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
CTSD-210ENST00000637381 TAF7Q15545 349 aaPredicted RBP16.95■□□□□ 0.3
CTSD-210ENST00000637381 KIF3CO14782 793 aa16.94■□□□□ 0.3
CTSD-210ENST00000637381 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
CTSD-210ENST00000637381 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
CTSD-210ENST00000637381 DCTN1Q14203 1278 aa16.94■□□□□ 0.3
CTSD-210ENST00000637381 TBC1D9BQ66K14 1250 aa16.94■□□□□ 0.3
CTSD-210ENST00000637381 TBC1D2BQ9UPU7 963 aa16.94■□□□□ 0.3
CTSD-210ENST00000637381 ZNF526Q8TF50 670 aaPredicted RBP16.93■□□□□ 0.3
CTSD-210ENST00000637381 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
CTSD-210ENST00000637381 PRAMEF22A3QJZ6 481 aa16.92■□□□□ 0.3
CTSD-210ENST00000637381 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
CTSD-210ENST00000637381 CARMIL3Q8ND23 1372 aa16.91■□□□□ 0.3
CTSD-210ENST00000637381 RGL2O15211 777 aa16.91■□□□□ 0.3
CTSD-210ENST00000637381 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
CTSD-210ENST00000637381 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
CTSD-210ENST00000637381 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
CTSD-210ENST00000637381 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 H0YIN7 160 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 RALBP1Q15311 655 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 C2CD5Q86YS7 1000 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 TTLL6Q8N841 843 aa16.9■□□□□ 0.3
CTSD-210ENST00000637381 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
CTSD-210ENST00000637381 NBPF26B4DH59 902 aa16.89■□□□□ 0.29
CTSD-210ENST00000637381 NEFMP07197 916 aa16.89■□□□□ 0.29
CTSD-210ENST00000637381 PRR5LQ6MZQ0 368 aa16.89■□□□□ 0.29
CTSD-210ENST00000637381 NBPF10Q6P3W6 841 aaKnown RBP16.89■□□□□ 0.29
CTSD-210ENST00000637381 DZIP3Q86Y13 1208 aaKnown RBP16.89■□□□□ 0.29
CTSD-210ENST00000637381 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
CTSD-210ENST00000637381 SETDB2Q96T68 719 aa16.89■□□□□ 0.29
CTSD-210ENST00000637381 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
CTSD-210ENST00000637381 COL11A2P13942 1736 aaPredicted RBP16.88■□□□□ 0.29
CTSD-210ENST00000637381 PDE6BP35913 854 aa16.88■□□□□ 0.29
CTSD-210ENST00000637381 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
CTSD-210ENST00000637381 PNISRQ8TF01 805 aaKnown RBP16.88■□□□□ 0.29
CTSD-210ENST00000637381 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
CTSD-210ENST00000637381 HSPA6P17066 643 aa16.87■□□□□ 0.29
CTSD-210ENST00000637381 MIS18AQ9NYP9 233 aa16.87■□□□□ 0.29
CTSD-210ENST00000637381 TOMM70O94826 608 aa16.86■□□□□ 0.29
CTSD-210ENST00000637381 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
CTSD-210ENST00000637381 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
CTSD-210ENST00000637381 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
CTSD-210ENST00000637381 ARFGEF2Q9Y6D5 1785 aa16.86■□□□□ 0.29
CTSD-210ENST00000637381 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
CTSD-210ENST00000637381 PRELPP51888 382 aa16.85■□□□□ 0.29
CTSD-210ENST00000637381 EIF4A1P60842 406 aaKnown RBP16.85■□□□□ 0.29
CTSD-210ENST00000637381 CNBD1Q8NA66 436 aa16.85■□□□□ 0.29
CTSD-210ENST00000637381 NMRK2Q9NPI5 230 aa16.85■□□□□ 0.29
CTSD-210ENST00000637381 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
CTSD-210ENST00000637381 LMNB1P20700 586 aa16.84■□□□□ 0.29
CTSD-210ENST00000637381 ZNF652Q9Y2D9 606 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms