RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 TMC6Q7Z403 805 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 CDK5RAP3Q96JB5 506 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 C8orf76Q96K31 380 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 PER1O15534 1290 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 EPB41L2O43491 1005 aaKnown RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 DNM1Q05193 864 aaKnown RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 PROSER2Q86WR7 435 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 CCDC144CPQ8IYA2 1237 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 ZKSCAN5Q9Y2L8 839 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 CC2D2AQ9P2K1 1620 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 CBFA2T2O43439 604 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 CCDC181Q5TID7 509 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 TAF3Q5VWG9 929 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 KIF6Q6ZMV9 814 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 OTUD7AQ8TE49 926 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 SH2B1Q9NRF2 756 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 RNF216Q9NWF9 866 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-216ENST00000637367 ZRANB1Q9UGI0 708 aa7.6□□□□□ -1.19
SCN2A-216ENST00000637367 DHX29Q7Z478 1369 aaKnown RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 ERLIN1O75477 346 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 KRT18P05783 430 aaKnown RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 CDR1P51861 262 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 UBE2HP62256 183 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 KIF4BQ2VIQ3 1234 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 HSP90AB2PQ58FF8 381 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 TOM1L2Q6ZVM7 507 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 MPHOSPH8Q99549 860 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 CARD14Q9BXL6 1004 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 ECHDC1Q9NTX5 307 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 MAGI1Q96QZ7 1491 aaPredicted RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 NOS1P29475 1434 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 TOP1P11387 765 aaKnown RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 CPA1P15085 419 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 UBAC1Q9BSL1 405 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 SMTNL1A8MU46 457 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 DYNC1I1O14576 645 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 IFIT1P09914 478 aaKnown RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 EIF5P55010 431 aaKnown RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 RAB3GAP1Q15042 981 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 IMMTQ16891 758 aaKnown RBP7.59□□□□□ -1.19
SCN2A-216ENST00000637367 NACAP1Q9BZK3 213 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 DACT1Q9NYF0 836 aa7.59□□□□□ -1.19
SCN2A-216ENST00000637367 MINDY4BA8MYZ0 360 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 C17orf53Q8N3J3 647 aaPredicted RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 BRF1Q92994 677 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 PLCD4Q9BRC7 762 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 CTNNA3Q9UI47 895 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 RPGRIP1LQ68CZ1 1315 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 SCAF11Q99590 1463 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 EIF3JO75822 258 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 ZSCAN22P10073 491 aaPredicted RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 RDXP35241 583 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 ENOX2Q16206 610 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 CCAR1Q8IX12 1150 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 BIVM-ERCC5R4GMW8 1640 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 GOLGA8BA8MQT2 603 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 GOLIM4O00461 696 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 ANO6Q4KMQ2 910 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 DDX46Q7L014 1031 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 RHPN1Q8TCX5 695 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 PHACTR3Q96KR7 559 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 ESYT1Q9BSJ8 1104 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 DNAJC25Q9H1X3 360 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 DDX19AQ9NUU7 478 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 SLC3A2P08195 630 aaKnown RBP7.58□□□□□ -1.2
SCN2A-216ENST00000637367 KIAA1328Q86T90 577 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 SMC5Q8IY18 1101 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 ANKRD44Q8N8A2 993 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 ZBTB40Q9NUA8 1239 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 LRP2BPQ9P2M1 347 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 DACH1Q9UI36 760 aa7.58□□□□□ -1.2
SCN2A-216ENST00000637367 METTL24Q5JXM2 366 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 TAX1BP1Q86VP1 789 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 RBSNQ9H1K0 784 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 RAI14Q9P0K7 980 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 KIAA0586Q9BVV6 1533 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 A0A087WZG4 1122 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 FOXO3O43524 673 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 MCM5P33992 734 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 ODF2Q5BJF6 829 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 UBE3BQ7Z3V4 1068 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 SNX21Q969T3 373 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 CDKL5O76039 1030 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 STIM1Q13586 685 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 FAM173BQ6P4H8 233 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 MICU3Q86XE3 530 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 PA2G4Q9UQ80 394 aaKnown RBP7.57□□□□□ -1.2
SCN2A-216ENST00000637367 MAP3K2Q9Y2U5 619 aa7.57□□□□□ -1.2
SCN2A-216ENST00000637367 CTDP1Q9Y5B0 961 aaPredicted RBP7.57□□□□□ -1.2
SCN2A-216ENST00000637367 THOC2Q8NI27 1593 aaKnown RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 ABCA10Q8WWZ4 1543 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 KIAA0754O94854 1291 aa7.56□□□□□ -1.2
SCN2A-216ENST00000637367 PIP4K2AP48426 406 aaPredicted RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 SNW1Q13573 536 aaKnown RBP7.56□□□□□ -1.2
SCN2A-216ENST00000637367 LARP1Q6PKG0 1096 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms