RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-254ENST00000636903 DISP2A7MBM2 1401 aa17.16■□□□□ 0.34
SMARCA2-254ENST00000636903 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 TOGARAM1Q9Y4F4 1720 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 MRC1P22897 1456 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 A1BGP04217 495 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
SMARCA2-254ENST00000636903 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.34
SMARCA2-254ENST00000636903 COPS6Q7L5N1 327 aa17.14■□□□□ 0.34
SMARCA2-254ENST00000636903 SMC5Q8IY18 1101 aa17.14■□□□□ 0.34
SMARCA2-254ENST00000636903 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
SMARCA2-254ENST00000636903 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
SMARCA2-254ENST00000636903 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
SMARCA2-254ENST00000636903 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-254ENST00000636903 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 DDX21Q9NR30 783 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 CACNA1FO60840 1977 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 DDB1Q16531 1140 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 LRP6O75581 1613 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 JCADQ9P266 1359 aa17.13■□□□□ 0.33
SMARCA2-254ENST00000636903 NBPF26B4DH59 902 aa17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 NBPF14Q5TI25 921 aa17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 NBPF10Q6P3W6 841 aaKnown RBP17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 NBPF15Q8N660 670 aa17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 SMARCA5O60264 1052 aaPredicted RBP17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
SMARCA2-254ENST00000636903 SLIT2O94813 1529 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
SMARCA2-254ENST00000636903 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 GLI3P10071 1580 aa17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 NUCB1Q02818 461 aa17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
SMARCA2-254ENST00000636903 KCNQ2O43526 872 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 GNAI2P04899 355 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 OTUD7AQ8TE49 926 aaPredicted RBP17.09■□□□□ 0.33
SMARCA2-254ENST00000636903 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.33
SMARCA2-254ENST00000636903 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.33
SMARCA2-254ENST00000636903 TTLL7Q6ZT98 887 aa17.08■□□□□ 0.33
SMARCA2-254ENST00000636903 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.33
SMARCA2-254ENST00000636903 USP21Q9UK80 565 aa17.08■□□□□ 0.33
SMARCA2-254ENST00000636903 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.33
SMARCA2-254ENST00000636903 SEC24BO95487 1268 aa17.08■□□□□ 0.32
SMARCA2-254ENST00000636903 ARXQ96QS3 562 aa17.08■□□□□ 0.32
SMARCA2-254ENST00000636903 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
SMARCA2-254ENST00000636903 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
SMARCA2-254ENST00000636903 MEX3CQ5U5Q3 659 aaKnown RBP17.07■□□□□ 0.32
SMARCA2-254ENST00000636903 MYD88Q99836 296 aa17.07■□□□□ 0.32
SMARCA2-254ENST00000636903 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
SMARCA2-254ENST00000636903 ITGB4P16144 1822 aa17.07■□□□□ 0.32
SMARCA2-254ENST00000636903 KCNQ4P56696 695 aa17.06■□□□□ 0.32
SMARCA2-254ENST00000636903 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
SMARCA2-254ENST00000636903 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
SMARCA2-254ENST00000636903 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
SMARCA2-254ENST00000636903 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
SMARCA2-254ENST00000636903 DCTPP1Q9H773 170 aa17.06■□□□□ 0.32
SMARCA2-254ENST00000636903 GNAI3P08754 354 aa17.05■□□□□ 0.32
SMARCA2-254ENST00000636903 FAM161AQ3B820 660 aa17.05■□□□□ 0.32
SMARCA2-254ENST00000636903 C9orf78Q9NZ63 289 aaPredicted RBP17.05■□□□□ 0.32
SMARCA2-254ENST00000636903 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
SMARCA2-254ENST00000636903 BCL9O00512 1426 aa17.04■□□□□ 0.32
SMARCA2-254ENST00000636903 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
SMARCA2-254ENST00000636903 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
SMARCA2-254ENST00000636903 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
SMARCA2-254ENST00000636903 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
SMARCA2-254ENST00000636903 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
SMARCA2-254ENST00000636903 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
SMARCA2-254ENST00000636903 UBR2Q8IWV8 1755 aa17.03■□□□□ 0.32
SMARCA2-254ENST00000636903 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.32
SMARCA2-254ENST00000636903 ATP8B2P98198 1209 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms