RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 ITPK1Q13572 414 aa21.58■■□□□ 1.05
CACNA1A-229ENST00000636670 C1orf141Q5JVX7 400 aa21.58■■□□□ 1.05
CACNA1A-229ENST00000636670 PARP3Q9Y6F1 533 aa21.58■■□□□ 1.05
CACNA1A-229ENST00000636670 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
CACNA1A-229ENST00000636670 PRDM10Q9NQV6 1147 aa21.57■■□□□ 1.04
CACNA1A-229ENST00000636670 RTCBQ9Y3I0 505 aaKnown RBP21.57■■□□□ 1.04
CACNA1A-229ENST00000636670 PRKAR2BP31323 418 aa21.56■■□□□ 1.04
CACNA1A-229ENST00000636670 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
CACNA1A-229ENST00000636670 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
CACNA1A-229ENST00000636670 UBR2Q8IWV8 1755 aa21.54■■□□□ 1.04
CACNA1A-229ENST00000636670 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
CACNA1A-229ENST00000636670 GLTPD2A6NH11 291 aa21.53■■□□□ 1.04
CACNA1A-229ENST00000636670 GYS1P13807 737 aa21.53■■□□□ 1.04
CACNA1A-229ENST00000636670 ADRA2BP18089 450 aa21.53■■□□□ 1.04
CACNA1A-229ENST00000636670 MTHFSDQ2M296 383 aaKnown RBP21.53■■□□□ 1.04
CACNA1A-229ENST00000636670 SBF1O95248 1867 aa21.53■■□□□ 1.04
CACNA1A-229ENST00000636670 FOXN1O15353 648 aa21.52■■□□□ 1.04
CACNA1A-229ENST00000636670 ANP32CO43423 234 aa21.52■■□□□ 1.04
CACNA1A-229ENST00000636670 ARHGEF1Q92888 912 aaKnown RBP21.52■■□□□ 1.04
CACNA1A-229ENST00000636670 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
CACNA1A-229ENST00000636670 ASAP1Q9ULH1 1129 aa21.52■■□□□ 1.04
CACNA1A-229ENST00000636670 COL5A3P25940 1745 aaPredicted RBP21.52■■□□□ 1.03
CACNA1A-229ENST00000636670 ERVV-2B6SEH9 535 aa21.51■■□□□ 1.03
CACNA1A-229ENST00000636670 FAM161AQ3B820 660 aa21.51■■□□□ 1.03
CACNA1A-229ENST00000636670 RFC4P35249 363 aa21.5■■□□□ 1.03
CACNA1A-229ENST00000636670 CREBZFQ9NS37 354 aa21.5■■□□□ 1.03
CACNA1A-229ENST00000636670 MKRN1Q9UHC7 482 aaKnown RBP21.49■■□□□ 1.03
CACNA1A-229ENST00000636670 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-229ENST00000636670 TJP1Q07157 1748 aa21.48■■□□□ 1.03
CACNA1A-229ENST00000636670 NEFMP07197 916 aa21.47■■□□□ 1.03
CACNA1A-229ENST00000636670 LMNB1P20700 586 aa21.47■■□□□ 1.03
CACNA1A-229ENST00000636670 CTCFP49711 727 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-229ENST00000636670 RC3H1Q5TC82 1133 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-229ENST00000636670 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
CACNA1A-229ENST00000636670 WDR43Q15061 677 aaKnown RBP eCLIP21.46■■□□□ 1.03
CACNA1A-229ENST00000636670 AIDAQ96BJ3 306 aa21.46■■□□□ 1.03
CACNA1A-229ENST00000636670 ATG3Q9NT62 314 aa21.46■■□□□ 1.03
CACNA1A-229ENST00000636670 GNAT3A8MTJ3 354 aa21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 RNMTO43148 476 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 RPS6KA4O75676 772 aa21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 CHRNA5P30532 468 aa21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 MAPK8IP3Q9UPT6 1336 aa21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 CEMIPQ8WUJ3 1361 aa21.45■■□□□ 1.02
CACNA1A-229ENST00000636670 KDM3BQ7LBC6 1761 aa21.44■■□□□ 1.02
CACNA1A-229ENST00000636670 CABP4P57796 275 aa21.44■■□□□ 1.02
CACNA1A-229ENST00000636670 RASSF7Q02833 373 aa21.44■■□□□ 1.02
CACNA1A-229ENST00000636670 ABHD8Q96I13 439 aa21.43■■□□□ 1.02
CACNA1A-229ENST00000636670 POTECB2RU33 542 aa21.42■■□□□ 1.02
CACNA1A-229ENST00000636670 CNTNAP4Q9C0A0 1308 aa21.42■■□□□ 1.02
CACNA1A-229ENST00000636670 SLC52A2Q9HAB3 445 aa21.42■■□□□ 1.02
CACNA1A-229ENST00000636670 MLLT1Q03111 559 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-229ENST00000636670 DPY19L2Q6NUT2 758 aa21.41■■□□□ 1.02
CACNA1A-229ENST00000636670 CNTNAP1P78357 1384 aa21.4■■□□□ 1.02
CACNA1A-229ENST00000636670 SLC4A9Q96Q91 983 aa21.4■■□□□ 1.02
CACNA1A-229ENST00000636670 LGR6Q9HBX8 967 aa21.4■■□□□ 1.02
CACNA1A-229ENST00000636670 HTATSF1O43719 755 aaKnown RBP21.39■■□□□ 1.01
CACNA1A-229ENST00000636670 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
CACNA1A-229ENST00000636670 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
CACNA1A-229ENST00000636670 LBX1P52954 281 aa21.38■■□□□ 1.01
CACNA1A-229ENST00000636670 DDR1Q08345 913 aa21.38■■□□□ 1.01
CACNA1A-229ENST00000636670 NFE2L2Q16236 605 aa21.38■■□□□ 1.01
CACNA1A-229ENST00000636670 NFATC2IPQ8NCF5 419 aa21.38■■□□□ 1.01
CACNA1A-229ENST00000636670 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
CACNA1A-229ENST00000636670 TEFQ10587 303 aa21.37■■□□□ 1.01
CACNA1A-229ENST00000636670 FKBP8Q14318 412 aa21.37■■□□□ 1.01
CACNA1A-229ENST00000636670 RTF1Q92541 710 aaKnown RBP21.37■■□□□ 1.01
CACNA1A-229ENST00000636670 RGS19P49795 217 aa21.36■■□□□ 1.01
CACNA1A-229ENST00000636670 IL17REQ8NFR9 667 aa21.36■■□□□ 1.01
CACNA1A-229ENST00000636670 MRS2Q9HD23 443 aa21.36■■□□□ 1.01
CACNA1A-229ENST00000636670 WBP1LQ9NX94 342 aa21.36■■□□□ 1.01
CACNA1A-229ENST00000636670 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
CACNA1A-229ENST00000636670 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
CACNA1A-229ENST00000636670 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
CACNA1A-229ENST00000636670 MYH14Q7Z406 1995 aaKnown RBP21.35■■□□□ 1.01
CACNA1A-229ENST00000636670 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-229ENST00000636670 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1.01
CACNA1A-229ENST00000636670 POLRMTO00411 1230 aaKnown RBP21.33■■□□□ 1.01
CACNA1A-229ENST00000636670 VEGFBP49765 207 aa21.33■■□□□ 1.01
CACNA1A-229ENST00000636670 TIAM2Q8IVF5 1701 aa21.32■■□□□ 1
CACNA1A-229ENST00000636670 TM4SF1P30408 202 aa21.32■■□□□ 1
CACNA1A-229ENST00000636670 CCDC146Q8IYE0 955 aa21.32■■□□□ 1
CACNA1A-229ENST00000636670 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
CACNA1A-229ENST00000636670 MCM10Q7L590 875 aa21.31■■□□□ 1
CACNA1A-229ENST00000636670 TTLL6Q8N841 843 aa21.31■■□□□ 1
CACNA1A-229ENST00000636670 TMPOP42166 694 aaKnown RBP21.3■■□□□ 1
CACNA1A-229ENST00000636670 CCDC88AQ3V6T2 1871 aa21.3■■□□□ 1
CACNA1A-229ENST00000636670 PASKQ96RG2 1323 aa21.29■■□□□ 1
CACNA1A-229ENST00000636670 CCDC85CA6NKD9 419 aa21.29■■□□□ 1
CACNA1A-229ENST00000636670 NFKBIEO00221 500 aa21.29■■□□□ 1
CACNA1A-229ENST00000636670 HSPA8P11142 646 aaKnown RBP21.29■■□□□ 1
CACNA1A-229ENST00000636670 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
CACNA1A-229ENST00000636670 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
CACNA1A-229ENST00000636670 TMEM88BA6NKF7 163 aa21.28■■□□□ 1
CACNA1A-229ENST00000636670 POTEIP0CG38 1075 aa21.28■■□□□ 1
CACNA1A-229ENST00000636670 POTEJP0CG39 1038 aa21.28■■□□□ 1
CACNA1A-229ENST00000636670 DCTN1Q14203 1278 aa21.28■■□□□ 1
CACNA1A-229ENST00000636670 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
CACNA1A-229ENST00000636670 CRKLP46109 303 aaKnown RBP21.27■■□□□ 1
CACNA1A-229ENST00000636670 RIPK4P57078 832 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms