RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 ZHX3Q9H4I2 956 aa16.75■□□□□ 0.27
GABRB3-219ENST00000636466 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
GABRB3-219ENST00000636466 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
GABRB3-219ENST00000636466 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
GABRB3-219ENST00000636466 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 CKAP2LQ8IYA6 745 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
GABRB3-219ENST00000636466 TTC22Q5TAA0 569 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 DDX46Q7L014 1031 aaKnown RBP16.74■□□□□ 0.27
GABRB3-219ENST00000636466 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 MRPL50Q8N5N7 158 aaKnown RBP16.74■□□□□ 0.27
GABRB3-219ENST00000636466 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
GABRB3-219ENST00000636466 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
GABRB3-219ENST00000636466 POLR3AO14802 1390 aaPredicted RBP16.73■□□□□ 0.27
GABRB3-219ENST00000636466 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 NUCB1Q02818 461 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 PA2G4Q9UQ80 394 aaKnown RBP16.73■□□□□ 0.27
GABRB3-219ENST00000636466 IL16Q14005 1332 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 CCDC70Q6NSX1 233 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
GABRB3-219ENST00000636466 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 C8orf34Q49A92 452 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 LRRC2Q9BYS8 371 aa16.73■□□□□ 0.27
GABRB3-219ENST00000636466 NUP160Q12769 1436 aa16.72■□□□□ 0.27
GABRB3-219ENST00000636466 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
GABRB3-219ENST00000636466 SSBP05455 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
GABRB3-219ENST00000636466 TXLNAP40222 546 aa16.72■□□□□ 0.27
GABRB3-219ENST00000636466 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
GABRB3-219ENST00000636466 RBM27Q9P2N5 1060 aaKnown RBP16.72■□□□□ 0.27
GABRB3-219ENST00000636466 EPS15P42566 896 aa16.72■□□□□ 0.27
GABRB3-219ENST00000636466 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-219ENST00000636466 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 NAPBQ9H115 298 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 PDE1AP54750 535 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 CCDC144CPQ8IYA2 1237 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 PRM3Q9NNZ6 103 aa16.71■□□□□ 0.27
GABRB3-219ENST00000636466 ITSN2Q9NZM3 1697 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 GPS2Q13227 327 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 CWF19L2Q2TBE0 894 aaKnown RBP16.7■□□□□ 0.26
GABRB3-219ENST00000636466 G2E3Q7L622 706 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
GABRB3-219ENST00000636466 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
GABRB3-219ENST00000636466 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
GABRB3-219ENST00000636466 ANKRD44Q8N8A2 993 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
GABRB3-219ENST00000636466 EXOC5O00471 708 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 AKAP2Q9Y2D5 859 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 UHRF1BP1Q6BDS2 1440 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 USP5P45974 858 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 ABCC10Q5T3U5 1492 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
GABRB3-219ENST00000636466 USP25Q9UHP3 1055 aa16.69■□□□□ 0.26
GABRB3-219ENST00000636466 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
GABRB3-219ENST00000636466 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
GABRB3-219ENST00000636466 GCP02774 474 aa16.68■□□□□ 0.26
GABRB3-219ENST00000636466 DHX8Q14562 1220 aaKnown RBP16.68■□□□□ 0.26
GABRB3-219ENST00000636466 CEP57L1Q8IYX8 460 aa16.68■□□□□ 0.26
GABRB3-219ENST00000636466 ARHGAP45Q92619 1136 aa16.68■□□□□ 0.26
GABRB3-219ENST00000636466 ORAI2Q96SN7 254 aa16.68■□□□□ 0.26
GABRB3-219ENST00000636466 PANK2Q9BZ23 570 aa16.68■□□□□ 0.26
GABRB3-219ENST00000636466 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 ZBTB40Q9NUA8 1239 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 ZNF213O14771 459 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 DTNBO60941 627 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 KLHL10Q6JEL2 608 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 TMX3Q96JJ7 454 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 C8orf76Q96K31 380 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 CDKL5O76039 1030 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
GABRB3-219ENST00000636466 GJB2P29033 226 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 CT47A1Q5JQC4 288 aaPredicted RBP16.67■□□□□ 0.26
GABRB3-219ENST00000636466 ZFYVE27Q5T4F4 411 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 CAGE1Q8TC20 777 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
GABRB3-219ENST00000636466 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
GABRB3-219ENST00000636466 NPATQ14207 1427 aa16.66■□□□□ 0.26
GABRB3-219ENST00000636466 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
GABRB3-219ENST00000636466 SKIDA1Q1XH10 827 aa16.66■□□□□ 0.26
GABRB3-219ENST00000636466 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
GABRB3-219ENST00000636466 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
GABRB3-219ENST00000636466 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
GABRB3-219ENST00000636466 BIN1O00499 593 aa16.66■□□□□ 0.26
GABRB3-219ENST00000636466 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
GABRB3-219ENST00000636466 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
GABRB3-219ENST00000636466 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
GABRB3-219ENST00000636466 ARGLU1Q9NWB6 273 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-219ENST00000636466 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms