RNA–Protein interactions for RNA: ENST00000636229.1

CCDC196-207, Transcript of coiled-coil domain containing 196, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC196, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-207ENST00000636229 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
CCDC196-207ENST00000636229 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
CCDC196-207ENST00000636229 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
CCDC196-207ENST00000636229 GNPATO15228 680 aa11.54□□□□□ -0.56
CCDC196-207ENST00000636229 NBPF1Q3BBV0 1214 aa11.54□□□□□ -0.56
CCDC196-207ENST00000636229 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
CCDC196-207ENST00000636229 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
CCDC196-207ENST00000636229 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
CCDC196-207ENST00000636229 TMF1P82094 1093 aa11.53□□□□□ -0.56
CCDC196-207ENST00000636229 RASSF7Q02833 373 aa11.53□□□□□ -0.56
CCDC196-207ENST00000636229 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
CCDC196-207ENST00000636229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC196-207ENST00000636229 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
CCDC196-207ENST00000636229 IP6K1Q92551 441 aa11.53□□□□□ -0.56
CCDC196-207ENST00000636229 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
CCDC196-207ENST00000636229 MEGF6O75095 1541 aa11.53□□□□□ -0.56
CCDC196-207ENST00000636229 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.56
CCDC196-207ENST00000636229 RGPD2P0DJD1 1756 aa11.52□□□□□ -0.57
CCDC196-207ENST00000636229 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.57
CCDC196-207ENST00000636229 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
CCDC196-207ENST00000636229 NME9Q86XW9 330 aa11.52□□□□□ -0.57
CCDC196-207ENST00000636229 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
CCDC196-207ENST00000636229 LMNB1P20700 586 aa11.51□□□□□ -0.57
CCDC196-207ENST00000636229 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
CCDC196-207ENST00000636229 FAM208AQ9UK61 1670 aaKnown RBP11.51□□□□□ -0.57
CCDC196-207ENST00000636229 C4AP0C0L4 1744 aa11.51□□□□□ -0.57
CCDC196-207ENST00000636229 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
CCDC196-207ENST00000636229 ITGB4P16144 1822 aa11.51□□□□□ -0.57
CCDC196-207ENST00000636229 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 CHRNA5P30532 468 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 SIK1P57059 783 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 ITPK1Q13572 414 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
CCDC196-207ENST00000636229 PIGBQ92521 554 aa11.49□□□□□ -0.57
CCDC196-207ENST00000636229 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
CCDC196-207ENST00000636229 GYS1P13807 737 aa11.48□□□□□ -0.57
CCDC196-207ENST00000636229 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
CCDC196-207ENST00000636229 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
CCDC196-207ENST00000636229 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
CCDC196-207ENST00000636229 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
CCDC196-207ENST00000636229 EVC2Q86UK5 1308 aa11.48□□□□□ -0.57
CCDC196-207ENST00000636229 CASP8AP2Q9UKL3 1982 aa11.47□□□□□ -0.57
CCDC196-207ENST00000636229 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
CCDC196-207ENST00000636229 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
CCDC196-207ENST00000636229 CGNL1Q0VF96 1302 aa11.46□□□□□ -0.57
CCDC196-207ENST00000636229 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
CCDC196-207ENST00000636229 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
CCDC196-207ENST00000636229 MCOLN1Q9GZU1 580 aa11.46□□□□□ -0.57
CCDC196-207ENST00000636229 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.58
CCDC196-207ENST00000636229 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
CCDC196-207ENST00000636229 CYP27B1O15528 508 aa11.45□□□□□ -0.58
CCDC196-207ENST00000636229 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
CCDC196-207ENST00000636229 ATP6V1AP38606 617 aa11.45□□□□□ -0.58
CCDC196-207ENST00000636229 DEFB115Q30KQ5 88 aa11.45□□□□□ -0.58
CCDC196-207ENST00000636229 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
CCDC196-207ENST00000636229 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
CCDC196-207ENST00000636229 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
CCDC196-207ENST00000636229 SBNO2Q9Y2G9 1366 aa11.44□□□□□ -0.58
CCDC196-207ENST00000636229 WDR33Q9C0J8 1336 aaKnown RBP11.44□□□□□ -0.58
CCDC196-207ENST00000636229 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
CCDC196-207ENST00000636229 PPP1R37O75864 691 aa11.44□□□□□ -0.58
CCDC196-207ENST00000636229 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
CCDC196-207ENST00000636229 USHBP1Q8N6Y0 703 aa11.44□□□□□ -0.58
CCDC196-207ENST00000636229 ASAP1Q9ULH1 1129 aa11.44□□□□□ -0.58
CCDC196-207ENST00000636229 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
CCDC196-207ENST00000636229 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
CCDC196-207ENST00000636229 HOXC9P31274 260 aa11.43□□□□□ -0.58
CCDC196-207ENST00000636229 DDR1Q08345 913 aa11.43□□□□□ -0.58
CCDC196-207ENST00000636229 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
CCDC196-207ENST00000636229 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
CCDC196-207ENST00000636229 NFKBIEO00221 500 aa11.42□□□□□ -0.58
CCDC196-207ENST00000636229 TATP17735 454 aaPredicted RBP11.42□□□□□ -0.58
CCDC196-207ENST00000636229 FBLN1P23142 703 aa11.42□□□□□ -0.58
CCDC196-207ENST00000636229 RFC4P35249 363 aa11.42□□□□□ -0.58
CCDC196-207ENST00000636229 CD163L1Q9NR16 1453 aa11.42□□□□□ -0.58
CCDC196-207ENST00000636229 DICER1Q9UPY3 1922 aaKnown RBP11.42□□□□□ -0.58
CCDC196-207ENST00000636229 MAP3K19Q56UN5 1328 aa11.41□□□□□ -0.58
CCDC196-207ENST00000636229 AMPHP49418 695 aa11.41□□□□□ -0.58
CCDC196-207ENST00000636229 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
CCDC196-207ENST00000636229 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
CCDC196-207ENST00000636229 MYH14Q7Z406 1995 aaKnown RBP11.41□□□□□ -0.58
CCDC196-207ENST00000636229 DDNO94850 711 aaPredicted RBP11.4□□□□□ -0.58
CCDC196-207ENST00000636229 BEGAINQ9BUH8 593 aa11.4□□□□□ -0.58
CCDC196-207ENST00000636229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC196-207ENST00000636229 RPS6KA4O75676 772 aa11.39□□□□□ -0.59
CCDC196-207ENST00000636229 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
CCDC196-207ENST00000636229 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
CCDC196-207ENST00000636229 SLC4A9Q96Q91 983 aa11.39□□□□□ -0.59
CCDC196-207ENST00000636229 ATG3Q9NT62 314 aa11.39□□□□□ -0.59
CCDC196-207ENST00000636229 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
CCDC196-207ENST00000636229 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
CCDC196-207ENST00000636229 TTLL6Q8N841 843 aa11.38□□□□□ -0.59
CCDC196-207ENST00000636229 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
CCDC196-207ENST00000636229 SRP68Q9UHB9 627 aaKnown RBP11.38□□□□□ -0.59
CCDC196-207ENST00000636229 POLRMTO00411 1230 aaKnown RBP11.37□□□□□ -0.59
CCDC196-207ENST00000636229 SOX10P56693 466 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms