RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 LGR6Q9HBX8 967 aa10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 ADCY9O60503 1353 aa10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 CANXP27824 592 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-212ENST00000636146 C9orf131Q5VYM1 1079 aa10.47□□□□□ -0.73
SYNGAP1-212ENST00000636146 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-212ENST00000636146 ZBED9Q6R2W3 1325 aa10.47□□□□□ -0.73
SYNGAP1-212ENST00000636146 KDM2BQ8NHM5 1336 aa10.47□□□□□ -0.73
SYNGAP1-212ENST00000636146 TOMM70O94826 608 aa10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 CCDC184Q52MB2 194 aa10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 INTS5Q6P9B9 1019 aaKnown RBP10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 FAM9BQ8IZU0 186 aa10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 GAS2L2Q8NHY3 880 aa10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 RNF181Q9P0P0 153 aa10.46□□□□□ -0.73
SYNGAP1-212ENST00000636146 COL3A1P02461 1466 aaPredicted RBP10.46□□□□□ -0.74
SYNGAP1-212ENST00000636146 SCN11AQ9UI33 1791 aa10.46□□□□□ -0.74
SYNGAP1-212ENST00000636146 KIF13BQ9NQT8 1826 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 A0A087WZG4 1122 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 GNAT3A8MTJ3 354 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 CYP19A1P11511 503 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 CHRNA5P30532 468 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 APLP1P51693 650 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 DDR1Q08345 913 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 BICDL1Q6ZP65 573 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 TEX13AQ9BXU3 409 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 NARFQ9UHQ1 456 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 NUDCQ9Y266 331 aa10.45□□□□□ -0.74
SYNGAP1-212ENST00000636146 COL15A1P39059 1388 aa10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 H0YIN7 160 aa10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 POLRMTO00411 1230 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 KIF3CO14782 793 aa10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 MYH14Q7Z406 1995 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 TJP1Q07157 1748 aa10.44□□□□□ -0.74
SYNGAP1-212ENST00000636146 SERPINB2P05120 415 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 NEFMP07197 916 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 KCNA3P22001 575 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 TM4SF1P30408 202 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 NFIXQ14938 502 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 NCBP3Q53F19 620 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 C2CD5Q86YS7 1000 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 NMRK2Q9NPI5 230 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
SYNGAP1-212ENST00000636146 TTLL6Q8N841 843 aa10.42□□□□□ -0.74
SYNGAP1-212ENST00000636146 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
SYNGAP1-212ENST00000636146 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 ZNF790Q6PG37 636 aa10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 ZNF622Q969S3 477 aaKnown RBP eCLIP10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 RRAGCQ9HB90 399 aa10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
SYNGAP1-212ENST00000636146 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 LMNB1P20700 586 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 PDE6BP35913 854 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 SETDB2Q96T68 719 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 TBC1D2BQ9UPU7 963 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 MRC1P22897 1456 aa10.4□□□□□ -0.74
SYNGAP1-212ENST00000636146 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.75
SYNGAP1-212ENST00000636146 PRKAR2BP31323 418 aa10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 ST5P78524 1137 aa10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 FSTL1Q12841 308 aa10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 HEG1Q9ULI3 1381 aa10.39□□□□□ -0.75
SYNGAP1-212ENST00000636146 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 ZC3H4Q9UPT8 1303 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 IL6STP40189 918 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 EIF5P55010 431 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 RASSF7Q02833 373 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 CNBD1Q8NA66 436 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 IL17REQ8NFR9 667 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 ADAMTS8Q9UP79 889 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
SYNGAP1-212ENST00000636146 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
SYNGAP1-212ENST00000636146 TBC1D9BQ66K14 1250 aa10.37□□□□□ -0.75
SYNGAP1-212ENST00000636146 DZIP3Q86Y13 1208 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-212ENST00000636146 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
SYNGAP1-212ENST00000636146 BRIP1Q9BX63 1249 aa10.37□□□□□ -0.75
SYNGAP1-212ENST00000636146 CARMIL3Q8ND23 1372 aa10.37□□□□□ -0.75
SYNGAP1-212ENST00000636146 C21orf2O43822 256 aa10.36□□□□□ -0.75
SYNGAP1-212ENST00000636146 A1BGP04217 495 aa10.36□□□□□ -0.75
SYNGAP1-212ENST00000636146 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
SYNGAP1-212ENST00000636146 CCDC24Q8N4L8 307 aa10.36□□□□□ -0.75
SYNGAP1-212ENST00000636146 BCL2L12Q9HB09 334 aa10.36□□□□□ -0.75
SYNGAP1-212ENST00000636146 MAPK8IP3Q9UPT6 1336 aa10.35□□□□□ -0.75
SYNGAP1-212ENST00000636146 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-212ENST00000636146 GLTPD2A6NH11 291 aa10.35□□□□□ -0.75
SYNGAP1-212ENST00000636146 SNRPA1P09661 255 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms