RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	SLIT2	O94813	1529 aa		13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	EIF4A1	P60842	406 aa	Known RBP	13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	RBM10	P98175	930 aa	Known RBP	13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SPATA31A5	Q5VU36	1347 aa		13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SPATA31A7	Q8IWB4	1347 aa		13.22	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	EXOC5	O00471	708 aa		13.21	□□□□□ -0.29
ARHGEF9-223	ENST00000636102	SLC39A6	Q13433	755 aa		13.21	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	NKX1-1	Q15270	411 aa	Predicted RBP	13.21	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	KIAA1211	Q6ZU35	1233 aa		13.21	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	LRP6	O75581	1613 aa		13.21	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	OFD1	O75665	1012 aa		13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	CABP4	P57796	275 aa		13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	MEX3C	Q5U5Q3	659 aa	Known RBP	13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	TMEM57	Q8N5G2	664 aa		13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	GZF1	Q9H116	711 aa	Predicted RBP	13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	THRAP3	Q9Y2W1	955 aa	Known RBP	13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	DISP2	A7MBM2	1401 aa		13.2	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	BCL9L	Q86UU0	1499 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	PTMS	P20962	102 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	MTERF4	Q7Z6M4	381 aa	Known RBP	13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	NECTIN2	Q92692	538 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	GCC1	Q96CN9	775 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	ARX	Q96QS3	562 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	USP21	Q9UK80	565 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	SLC4A2	P04920	1241 aa		13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.19	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	VPS72	Q15906	364 aa		13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	ZNF790	Q6PG37	636 aa		13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	LRRC37A3	O60309	1634 aa		13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	ERVV-2	B6SEH9	535 aa		13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	NUCB1	Q02818	461 aa		13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	CCDC173	Q0VFZ6	552 aa		13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	API5	Q9BZZ5	524 aa	Known RBP	13.18	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	EIF2S2	P20042	333 aa	Known RBP	13.17	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.17	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	BARGIN	Q6ZT62	677 aa		13.17	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	PPP1R9B	Q96SB3	815 aa		13.17	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.17	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	PRAMEF22	A3QJZ6	481 aa		13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	DDB1	Q16531	1140 aa		13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	FAM98C	Q17RN3	349 aa	Known RBP	13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	GIGYF1	O75420	1035 aa	Predicted RBP	13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	CCDC30	Q5VVM6	783 aa		13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	G2E3	Q7L622	706 aa		13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	ZSCAN30	Q86W11	494 aa		13.16	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	ZBTB7B	O15156	539 aa	Predicted RBP	13.15	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	HDGFL1	Q5TGJ6	251 aa		13.15	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	C22orf23	Q9BZE7	217 aa		13.15	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	PLCH1	Q4KWH8	1693 aa		13.15	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	AFF2	P51816	1311 aa		13.15	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	ZNF496	Q96IT1	587 aa	Predicted RBP	13.15	□□□□□ -0.3
ARHGEF9-223	ENST00000636102	PKD1L3	Q7Z443	1732 aa		13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	HEG1	Q9ULI3	1381 aa		13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	ABCC4	O15439	1325 aa		13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	SOS1	Q07889	1333 aa	Predicted RBP	13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	CHD1L	Q86WJ1	897 aa		13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	TTC5	Q8N0Z6	440 aa		13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	MARCH10	Q8NA82	808 aa	Predicted RBP	13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	STK31	Q9BXU1	1019 aa		13.14	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	HOXB7	P09629	217 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	HS1BP3	Q53T59	392 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	ADAMTS7	Q9UKP4	1686 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	FGD1	P98174	961 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	BMP2KL	Q5H9B9	411 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PIGB	Q92521	554 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	TMOD3	Q9NYL9	352 aa		13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PARP4	Q9UKK3	1724 aa	Known RBP	13.13	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	NRAP	Q86VF7	1730 aa		13.12	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	DDIT3	P35638	169 aa		13.12	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	GJD4	Q96KN9	370 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	CHPF2	Q9P2E5	772 aa		13.12	□□□□□ -0.31
ARHGEF9-223	ENST00000636102		A0A0G2JS52	829 aa		13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	ANXA1	P04083	346 aa		13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PRIM1	P49642	420 aa	Known RBP	13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	RBM25	P49756	843 aa	Known RBP	13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	UTP14C	Q5TAP6	766 aa	Known RBP	13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	SYTL4	Q96C24	671 aa	Predicted RBP	13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	FMNL2	Q96PY5	1086 aa		13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PHAX	Q9H814	394 aa	Known RBP	13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	USP16	Q9Y5T5	823 aa		13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	MRC1	P22897	1456 aa		13.11	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	TNS2	Q63HR2	1409 aa		13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PTCD1	O75127	700 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	ASAP1	Q9ULH1	1129 aa		13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	SNRPA1	P09661	255 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	MSN	P26038	577 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	FLII	Q13045	1269 aa		13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	ACSBG1	Q96GR2	724 aa		13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	GBP4	Q96PP9	640 aa		13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	QTRT2	Q9H974	415 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PTPRC	P08575	1304 aa		13.09	□□□□□ -0.31
ARHGEF9-223	ENST00000636102		F6X3S4	739 aa		13.09	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	PROSER3	Q2NL68	480 aa		13.09	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	GAS2L3	Q86XJ1	694 aa		13.09	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	ANP32B	Q92688	251 aa	Known RBP	13.09	□□□□□ -0.31
ARHGEF9-223	ENST00000636102	SNX21	Q969T3	373 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms