RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 KRTAP12-2P59991 146 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 HNRNPKP61978 463 aaKnown RBP eCLIP-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 TRIM28Q13263 835 aaKnown RBP-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 KRTAP15-1Q3LI76 137 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 NAALADL2Q58DX5 795 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 BLOC1S3Q6QNY0 202 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 ATG14Q6ZNE5 492 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF366Q8N895 744 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 AGBL5Q8NDL9 886 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 IKZF4Q9H2S9 585 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 CD320Q9NPF0 282 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF358Q9NW07 568 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF112Q9UJU3 913 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 FCF1Q9Y324 198 aaKnown RBP-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 PCDHB3Q9Y5E6 796 aa-0.19□□□□□ -2.44
CDKL5-210ENST00000636046 ATXN7O15265 892 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 ONECUT3O60422 494 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 IGLV1-40P01703 118 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 TIMP2P16035 220 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 SFPQP23246 707 aaKnown RBP eCLIP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 KRT2P35908 639 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 WDR4P57081 412 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 LINC00310P59036 64 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 KRTAP10-4P60372 401 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 TRA2BP62995 288 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 HYAL1Q12794 435 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 TRIM32Q13049 653 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 NCBP3Q53F19 620 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 LCE3EQ5T5B0 92 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 RC3H1Q5TC82 1133 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 CPZQ66K79 652 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 PTCRAQ6ISU1 281 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 LARP1Q6PKG0 1096 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 DLK2Q6UY11 383 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 SPRED1Q7Z699 444 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 ATG4DQ86TL0 474 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 VSIG10LQ86VR7 867 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 ZSCAN29Q8IWY8 852 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 ZDHHC14Q8IZN3 488 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 KLRG1Q96E93 195 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 CSRNP2Q9H175 543 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 VPS11Q9H270 941 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 ADARB2Q9NS39 739 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 CUEDC1Q9NWM3 386 aaPredicted RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 CCDC39Q9UFE4 941 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 CNOT11Q9UKZ1 510 aaKnown RBP-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 LTBP3Q9NS15 1303 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 NEBP20929 6669 aa-0.2□□□□□ -2.44
CDKL5-210ENST00000636046 A0A0A6YYK5 440 aaPredicted RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 PRR19A6NJB7 356 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 SELPP16109 830 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 DRD4P21917 467 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 CCKBRP32239 447 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 CNR2P34972 360 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 COMPP49747 757 aaPredicted RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 FOSBP53539 338 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 NBPF9Q3BBW0 867 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 DGKKQ5KSL6 1271 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 LCE3CQ5T5A8 94 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 FBXO31Q5XUX0 539 aaPredicted RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 HIST2H2BDQ6DRA6 164 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 CYB5RLQ6IPT4 315 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 C11orf87Q6NUJ2 197 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 FAM117BQ6P1L5 589 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 NFXL1Q6ZNB6 911 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 SLCO4C1Q6ZQN7 724 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 CHSY3Q70JA7 882 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 NAA40Q86UY6 237 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 FOXP4Q8IVH2 680 aaPredicted RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 LINC00528Q8N1L1 170 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 SMRP1Q8NCR6 262 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 GLIS3Q8NEA6 775 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 FEZF2Q8TBJ5 459 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 TMC2Q8TDI7 906 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 PTCD2Q8WV60 388 aaKnown RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 NECTIN2Q92692 538 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 LENG1Q96BZ8 264 aaPredicted RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF747Q9BV97 191 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 ADAM33Q9BZ11 813 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 ADAM7Q9H2U9 754 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 SMPD4Q9NXE4 827 aa-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 SMG5Q9UPR3 1016 aaKnown RBP-0.21□□□□□ -2.44
CDKL5-210ENST00000636046 A0A087X1B8 175 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 A0A0A0MRY4 1105 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZC3H12DA2A288 527 aaKnown RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ERI2A8K979 691 aaKnown RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 MASP2O00187 686 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 TRAFD1O14545 582 aaPredicted RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 NPM3O75607 178 aaKnown RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ADH1CP00326 375 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 GLI1P08151 1106 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 EPXP11678 715 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 HOXD8P13378 290 aaPredicted RBP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF20P17024 532 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 HOXC13P31276 330 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 NOVP48745 357 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 DPTQ07507 201 aa-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 SF3B4Q15427 424 aaKnown RBP eCLIP-0.22□□□□□ -2.44
CDKL5-210ENST00000636046 ZNF792Q3KQV3 632 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms