RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SGSM2O43147 1006 aa17.76■□□□□ 0.43
CACNA1A-220ENST00000635988 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
CACNA1A-220ENST00000635988 OVOS2A0A0J9YW53 1432 aa17.76■□□□□ 0.43
CACNA1A-220ENST00000635988 TECPR2O15040 1411 aa17.76■□□□□ 0.43
CACNA1A-220ENST00000635988 OVOS2Q6IE36 1432 aa17.76■□□□□ 0.43
CACNA1A-220ENST00000635988 KIAA1524Q8TCG1 905 aa17.75■□□□□ 0.43
CACNA1A-220ENST00000635988 SNX14Q9Y5W7 946 aa17.75■□□□□ 0.43
CACNA1A-220ENST00000635988 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
CACNA1A-220ENST00000635988 PDIA4P13667 645 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-220ENST00000635988 HTATSF1O43719 755 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 TXNDC2Q86VQ3 553 aa17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 GTPBP4Q9BZE4 634 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 LRRFIP2Q9Y608 721 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 AK2P54819 239 aa17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 MPNDQ8N594 471 aa17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 SSH3Q8TE77 659 aa17.74■□□□□ 0.43
CACNA1A-220ENST00000635988 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 CNTROBQ8N137 903 aa17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 CCDC192P0DO97 292 aa17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 ZSCAN20P17040 1043 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 METP08581 1390 aa17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 TCHHQ07283 1943 aa17.73■□□□□ 0.43
CACNA1A-220ENST00000635988 FIBPO43427 364 aa17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 LSG1Q9H089 658 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 IL25Q9H293 177 aa17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-220ENST00000635988 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 C17orf53Q8N3J3 647 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 SH2B1Q9NRF2 756 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 MAP3K19Q56UN5 1328 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 PLCB2Q00722 1185 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 PRDM10Q9NQV6 1147 aa17.71■□□□□ 0.43
CACNA1A-220ENST00000635988 NRXN3Q9Y4C0 1643 aa17.71■□□□□ 0.42
CACNA1A-220ENST00000635988 KDRP35968 1356 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 PDCL2Q8N4E4 241 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 PI4K2BQ8TCG2 481 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 USP44Q9H0E7 712 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 IL1RAPL2Q9NP60 686 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 N4BP2Q86UW6 1770 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 TSC1Q92574 1164 aa17.7■□□□□ 0.42
CACNA1A-220ENST00000635988 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 FOXO3O43524 673 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 HDGFP51858 240 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 NUTM1Q86Y26 1132 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 SURF6O75683 361 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 POLA2Q14181 598 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 CACNA1FO60840 1977 aa17.69■□□□□ 0.42
CACNA1A-220ENST00000635988 HSP90AB4PQ58FF6 505 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 JARID2Q92833 1246 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 KCNF1Q9H3M0 494 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 HYPKQ9NX55 129 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 GJB2P29033 226 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 ANKRD7Q92527 254 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 ACEP12821 1306 aa17.68■□□□□ 0.42
CACNA1A-220ENST00000635988 CTIFO43310 598 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 CBX1P83916 185 aa17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 USP6P35125 1406 aa17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 RIOK3O14730 519 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 KIF20AO95235 890 aa17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 PYCARDQ9ULZ3 195 aa17.67■□□□□ 0.42
CACNA1A-220ENST00000635988 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 USP42Q9H9J4 1324 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 FLT4P35916 1363 aa17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 AGLP35573 1532 aa17.66■□□□□ 0.42
CACNA1A-220ENST00000635988 AP5Z1O43299 807 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 SYCP1Q15431 976 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 MAP3K11Q16584 847 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 TPRNQ4KMQ1 711 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 CCDC83Q8IWF9 413 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 FEZ1Q99689 392 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 CYP46A1Q9Y6A2 500 aa17.65■□□□□ 0.42
CACNA1A-220ENST00000635988 ELP1O95163 1332 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms