RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GSE1Q14687 1217 aa19.68■□□□□ 0.74
CLN8-209ENST00000635970 TAF7Q15545 349 aaPredicted RBP19.68■□□□□ 0.74
CLN8-209ENST00000635970 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
CLN8-209ENST00000635970 ITPK1Q13572 414 aa19.67■□□□□ 0.74
CLN8-209ENST00000635970 TTC5Q8N0Z6 440 aa19.67■□□□□ 0.74
CLN8-209ENST00000635970 ZNF827Q17R98 1081 aa19.65■□□□□ 0.74
CLN8-209ENST00000635970 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
CLN8-209ENST00000635970 TRMT2AQ8IZ69 625 aaKnown RBP19.64■□□□□ 0.74
CLN8-209ENST00000635970 LINC00116Q8NCU8 138 aa19.64■□□□□ 0.74
CLN8-209ENST00000635970 MYH14Q7Z406 1995 aaKnown RBP19.64■□□□□ 0.73
CLN8-209ENST00000635970 NFKBIBQ15653 356 aa19.64■□□□□ 0.73
CLN8-209ENST00000635970 UBR3Q6ZT12 1888 aa19.64■□□□□ 0.73
CLN8-209ENST00000635970 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
CLN8-209ENST00000635970 WWC1Q8IX03 1113 aa19.63■□□□□ 0.73
CLN8-209ENST00000635970 PSDA5PKW4 1024 aaPredicted RBP19.63■□□□□ 0.73
CLN8-209ENST00000635970 C20orf194Q5TEA3 1177 aa19.63■□□□□ 0.73
CLN8-209ENST00000635970 TSPYL4Q9UJ04 414 aa19.63■□□□□ 0.73
CLN8-209ENST00000635970 LAMB4A4D0S4 1761 aa19.62■□□□□ 0.73
CLN8-209ENST00000635970 QSER1Q2KHR3 1735 aa19.62■□□□□ 0.73
CLN8-209ENST00000635970 R3HDM1Q15032 1099 aaKnown RBP19.62■□□□□ 0.73
CLN8-209ENST00000635970 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
CLN8-209ENST00000635970 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
CLN8-209ENST00000635970 HEG1Q9ULI3 1381 aa19.62■□□□□ 0.73
CLN8-209ENST00000635970 NBPF14Q5TI25 921 aa19.61■□□□□ 0.73
CLN8-209ENST00000635970 DNAJC10Q8IXB1 793 aa19.61■□□□□ 0.73
CLN8-209ENST00000635970 PRAMEF22A3QJZ6 481 aa19.61■□□□□ 0.73
CLN8-209ENST00000635970 AKT1S1Q96B36 256 aa19.61■□□□□ 0.73
CLN8-209ENST00000635970 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
CLN8-209ENST00000635970 SLC15A2Q16348 729 aa19.6■□□□□ 0.73
CLN8-209ENST00000635970 STK32BQ9NY57 414 aa19.6■□□□□ 0.73
CLN8-209ENST00000635970 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
CLN8-209ENST00000635970 CASZ1Q86V15 1759 aa19.59■□□□□ 0.73
CLN8-209ENST00000635970 CHL1O00533 1208 aa19.59■□□□□ 0.73
CLN8-209ENST00000635970 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
CLN8-209ENST00000635970 SMIM5Q71RC9 77 aa19.58■□□□□ 0.73
CLN8-209ENST00000635970 CFAP44Q96MT7 982 aa19.58■□□□□ 0.73
CLN8-209ENST00000635970 EIF4A1P60842 406 aaKnown RBP19.57■□□□□ 0.72
CLN8-209ENST00000635970 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
CLN8-209ENST00000635970 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
CLN8-209ENST00000635970 ZNF853P0CG23 659 aa19.57■□□□□ 0.72
CLN8-209ENST00000635970 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
CLN8-209ENST00000635970 AK7Q96M32 723 aa19.57■□□□□ 0.72
CLN8-209ENST00000635970 PDGFDQ9GZP0 370 aaPredicted RBP19.57■□□□□ 0.72
CLN8-209ENST00000635970 C4AP0C0L4 1744 aa19.56■□□□□ 0.72
CLN8-209ENST00000635970 E9PSI1 815 aa19.56■□□□□ 0.72
CLN8-209ENST00000635970 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
CLN8-209ENST00000635970 AAMPQ13685 434 aa19.56■□□□□ 0.72
CLN8-209ENST00000635970 KRT24Q2M2I5 525 aa19.56■□□□□ 0.72
CLN8-209ENST00000635970 IFT57Q9NWB7 429 aa19.56■□□□□ 0.72
CLN8-209ENST00000635970 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
CLN8-209ENST00000635970 CRKLP46109 303 aaKnown RBP19.55■□□□□ 0.72
CLN8-209ENST00000635970 BABAM1Q9NWV8 329 aa19.55■□□□□ 0.72
CLN8-209ENST00000635970 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
CLN8-209ENST00000635970 GNPATO15228 680 aa19.55■□□□□ 0.72
CLN8-209ENST00000635970 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
CLN8-209ENST00000635970 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
CLN8-209ENST00000635970 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
CLN8-209ENST00000635970 SRCAPQ6ZRS2 3230 aa19.55■□□□□ 0.72
CLN8-209ENST00000635970 PNPLA7Q6ZV29 1317 aa19.54■□□□□ 0.72
CLN8-209ENST00000635970 GNAI1P63096 354 aa19.54■□□□□ 0.72
CLN8-209ENST00000635970 PDE3AQ14432 1141 aa19.54■□□□□ 0.72
CLN8-209ENST00000635970 PHF14O94880 888 aa19.53■□□□□ 0.72
CLN8-209ENST00000635970 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
CLN8-209ENST00000635970 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
CLN8-209ENST00000635970 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
CLN8-209ENST00000635970 ZBTB1Q9Y2K1 713 aa19.53■□□□□ 0.72
CLN8-209ENST00000635970 INTS5Q6P9B9 1019 aaKnown RBP19.52■□□□□ 0.72
CLN8-209ENST00000635970 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.71
CLN8-209ENST00000635970 WDR63Q8IWG1 891 aa19.52■□□□□ 0.71
CLN8-209ENST00000635970 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.71
CLN8-209ENST00000635970 IL16Q14005 1332 aa19.51■□□□□ 0.71
CLN8-209ENST00000635970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
CLN8-209ENST00000635970 STARD3NLO95772 234 aa19.5■□□□□ 0.71
CLN8-209ENST00000635970 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
CLN8-209ENST00000635970 SKAP1Q86WV1 359 aa19.5■□□□□ 0.71
CLN8-209ENST00000635970 A1BGP04217 495 aa19.5■□□□□ 0.71
CLN8-209ENST00000635970 COL23A1Q86Y22 540 aaPredicted RBP19.5■□□□□ 0.71
CLN8-209ENST00000635970 TEX13AQ9BXU3 409 aaPredicted RBP19.5■□□□□ 0.71
CLN8-209ENST00000635970 CANXP27824 592 aaKnown RBP19.49■□□□□ 0.71
CLN8-209ENST00000635970 RTCBQ9Y3I0 505 aaKnown RBP19.49■□□□□ 0.71
CLN8-209ENST00000635970 HMGB2P26583 209 aaKnown RBP19.48■□□□□ 0.71
CLN8-209ENST00000635970 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
CLN8-209ENST00000635970 SSFA2P28290 1259 aa19.48■□□□□ 0.71
CLN8-209ENST00000635970 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
CLN8-209ENST00000635970 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
CLN8-209ENST00000635970 NECTIN2Q92692 538 aa19.47■□□□□ 0.71
CLN8-209ENST00000635970 SOS1Q07889 1333 aaPredicted RBP19.47■□□□□ 0.71
CLN8-209ENST00000635970 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
CLN8-209ENST00000635970 ZNF330Q9Y3S2 320 aaPredicted RBP19.46■□□□□ 0.71
CLN8-209ENST00000635970 COL15A1P39059 1388 aa19.46■□□□□ 0.71
CLN8-209ENST00000635970 EIF2S2P20042 333 aaKnown RBP19.46■□□□□ 0.71
CLN8-209ENST00000635970 BECN1Q14457 450 aa19.46■□□□□ 0.71
CLN8-209ENST00000635970 NBPF26B4DH59 902 aa19.45■□□□□ 0.7
CLN8-209ENST00000635970 ZBTB7AO95365 584 aa19.45■□□□□ 0.7
CLN8-209ENST00000635970 SLC4A3P48751 1232 aa19.45■□□□□ 0.7
CLN8-209ENST00000635970 NBPF10Q6P3W6 841 aaKnown RBP19.45■□□□□ 0.7
CLN8-209ENST00000635970 NBPF15Q8N660 670 aa19.45■□□□□ 0.7
CLN8-209ENST00000635970 TSPYL6Q8N831 410 aa19.45■□□□□ 0.7
CLN8-209ENST00000635970 RGS3P49796 1198 aa19.44■□□□□ 0.7
CLN8-209ENST00000635970 ARHGEF1Q92888 912 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms