RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 CALCOCO1Q9P1Z2 691 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 NAPBQ9H115 298 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 IGF1RP08069 1367 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 TMPOP42166 694 aaKnown RBP10.55□□□□□ -0.72
CSMD1-218ENST00000635120 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSMD1-218ENST00000635120 FSIP1Q8NA03 581 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 AK9Q5TCS8 1911 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 SSFA2P28290 1259 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 NFE2L2Q16236 605 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 CCDC150Q8NCX0 1101 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 THUMPD2Q9BTF0 503 aaKnown RBP10.55□□□□□ -0.72
CSMD1-218ENST00000635120 TMC6Q7Z403 805 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 AFAP1Q8N556 730 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 SCLT1Q96NL6 688 aa10.55□□□□□ -0.72
CSMD1-218ENST00000635120 GNAT3A8MTJ3 354 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 GUCY1B3Q02153 619 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 DUSP27Q5VZP5 1158 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 MICALCLQ6ZW33 695 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 USP25Q9UHP3 1055 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 RAB11FIP3O75154 756 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 GLRX3O76003 335 aaKnown RBP10.54□□□□□ -0.72
CSMD1-218ENST00000635120 POLR3DP05423 398 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-218ENST00000635120 BOLA2Q9H3K6 86 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 PRDM11Q9NQV5 511 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 BIN1O00499 593 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 GTF2F1P35269 517 aaKnown RBP eCLIP10.54□□□□□ -0.72
CSMD1-218ENST00000635120 SPTY2D1Q68D10 685 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-218ENST00000635120 PPP4R3AQ6IN85 833 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 SLC12A7Q9Y666 1083 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 EPRSP07814 1512 aaKnown RBP10.54□□□□□ -0.72
CSMD1-218ENST00000635120 CTAGE5O15320 804 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 MCM10Q7L590 875 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 DNAI2Q9GZS0 605 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 YEATS4O95619 227 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
CSMD1-218ENST00000635120 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 TMOD2Q9NZR1 351 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 ANKIB1Q9P2G1 1089 aa10.54□□□□□ -0.72
CSMD1-218ENST00000635120 IPO4Q8TEX9 1081 aaKnown RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 MAATS1Q7Z4T9 603 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 LIG1P18858 919 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 USO1O60763 962 aaKnown RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CCDC141Q6ZP82 1450 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 NUTM2BA6NNL0 878 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 NUTM2EB1AL46 878 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 RANBP6O60518 1105 aaKnown RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 PAFAH1B1P43034 410 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 NUTM2AQ8IVF1 878 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 MYO10Q9HD67 2058 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 FCHSD2O94868 740 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CPLX3Q8WVH0 158 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CTNNA2P26232 953 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 TDRD12Q587J7 1177 aaKnown RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 ADCY5O95622 1261 aa10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CCT2P78371 535 aaKnown RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 CRACR2BQ8N4Y2 399 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-218ENST00000635120 DZIP1Q86YF9 867 aaKnown RBP10.52□□□□□ -0.72
CSMD1-218ENST00000635120 TAOK3Q9H2K8 898 aa10.52□□□□□ -0.72
CSMD1-218ENST00000635120 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.72
CSMD1-218ENST00000635120 GSDMDP57764 484 aa10.52□□□□□ -0.72
CSMD1-218ENST00000635120 SSRP1Q08945 709 aaKnown RBP10.52□□□□□ -0.72
CSMD1-218ENST00000635120 LIMCH1Q9UPQ0 1083 aa10.52□□□□□ -0.72
CSMD1-218ENST00000635120 RAB34Q9BZG1 259 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 DAPK1P53355 1430 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 PRPF4BQ13523 1007 aaKnown RBP10.52□□□□□ -0.73
CSMD1-218ENST00000635120 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 A0A087WZG4 1122 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 NBPF8Q3BBV2 869 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 MKNK2Q9HBH9 465 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-218ENST00000635120 SNW1Q13573 536 aaKnown RBP10.52□□□□□ -0.73
CSMD1-218ENST00000635120 SPECC1Q5M775 1068 aa10.52□□□□□ -0.73
CSMD1-218ENST00000635120 SMARCC1Q92922 1105 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-218ENST00000635120 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 ITSN2Q9NZM3 1697 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 NEMFO60524 1076 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 SPDYE4A6NLX3 237 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 CDK13Q14004 1512 aaKnown RBP10.51□□□□□ -0.73
CSMD1-218ENST00000635120 CCDC194A0A1B0GVG4 234 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 LMAN1P49257 510 aa10.51□□□□□ -0.73
CSMD1-218ENST00000635120 CATIPQ7Z7H3 387 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms