RNA–Protein interactions for RNA: ENST00000634536.1

SMARCA2-224, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-224ENST00000634536 HYPKQ9NX55 129 aa11.98□□□□□ -0.49
SMARCA2-224ENST00000634536 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 RREB1Q92766 1687 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 ATP10DQ9P241 1426 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 FLIIQ13045 1269 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 CCDC136Q96JN2 1154 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 COG6Q9Y2V7 657 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 TJP1Q07157 1748 aa11.97□□□□□ -0.49
SMARCA2-224ENST00000634536 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
SMARCA2-224ENST00000634536 SLC39A6Q13433 755 aa11.96□□□□□ -0.49
SMARCA2-224ENST00000634536 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
SMARCA2-224ENST00000634536 ZNF772Q68DY9 489 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-224ENST00000634536 PIGBQ92521 554 aa11.96□□□□□ -0.49
SMARCA2-224ENST00000634536 TMEM57Q8N5G2 664 aa11.95□□□□□ -0.5
SMARCA2-224ENST00000634536 ZBTB40Q9NUA8 1239 aa11.95□□□□□ -0.5
SMARCA2-224ENST00000634536 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 PDIA6Q15084 440 aa11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 ATG3Q9NT62 314 aa11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 RNF216Q9NWF9 866 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
SMARCA2-224ENST00000634536 BTAF1O14981 1849 aa11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 ARFGEF2Q9Y6D5 1785 aa11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 CENPQQ7L2Z9 268 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 LY75O60449 1722 aa11.93□□□□□ -0.5
SMARCA2-224ENST00000634536 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-224ENST00000634536 G2E3Q7L622 706 aa11.92□□□□□ -0.5
SMARCA2-224ENST00000634536 BRWD3Q6RI45 1802 aa11.92□□□□□ -0.5
SMARCA2-224ENST00000634536 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 KSR2Q6VAB6 950 aa11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 USP16Q9Y5T5 823 aa11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 ADCY9O60503 1353 aa11.91□□□□□ -0.5
SMARCA2-224ENST00000634536 STARD3NLO95772 234 aa11.9□□□□□ -0.5
SMARCA2-224ENST00000634536 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
SMARCA2-224ENST00000634536 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-224ENST00000634536 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
SMARCA2-224ENST00000634536 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.51
SMARCA2-224ENST00000634536 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 GNAI3P08754 354 aa11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 RWDD1Q9H446 243 aaPredicted RBP11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 RGPD4Q7Z3J3 1758 aa11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
SMARCA2-224ENST00000634536 ANKRD36CQ5JPF3 1778 aa11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 PI4KAP2A4QPH2 592 aa11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 RGL2O15211 777 aa11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 RPAP2Q8IXW5 612 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 PI4KAP1Q8N8J0 262 aa11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
SMARCA2-224ENST00000634536 PTCD1O75127 700 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 FAM196AQ6ZSG2 479 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 TAF1LQ8IZX4 1826 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 COL15A1P39059 1388 aa11.87□□□□□ -0.51
SMARCA2-224ENST00000634536 UTYO14607 1347 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 A0A0G2JS52 829 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 F6X3S4 739 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 SIK1P57059 783 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 MYT1Q01538 1121 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 NBPF14Q5TI25 921 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
SMARCA2-224ENST00000634536 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
SMARCA2-224ENST00000634536 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
SMARCA2-224ENST00000634536 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
SMARCA2-224ENST00000634536 KRT27Q7Z3Y8 459 aa11.85□□□□□ -0.51
SMARCA2-224ENST00000634536 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms