RNA–Protein interactions for RNA: ENST00000633646.1

GRAMD1B-213, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-213ENST00000633646 MIS18AQ9NYP9 233 aa22.38■■□□□ 1.17
GRAMD1B-213ENST00000633646 PRAMEF22A3QJZ6 481 aa22.37■■□□□ 1.17
GRAMD1B-213ENST00000633646 YBX3P16989 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
GRAMD1B-213ENST00000633646 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
GRAMD1B-213ENST00000633646 DLG5Q8TDM6 1919 aa22.37■■□□□ 1.17
GRAMD1B-213ENST00000633646 STARD3NLO95772 234 aa22.36■■□□□ 1.17
GRAMD1B-213ENST00000633646 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
GRAMD1B-213ENST00000633646 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
GRAMD1B-213ENST00000633646 COL15A1P39059 1388 aa22.36■■□□□ 1.17
GRAMD1B-213ENST00000633646 MAPK8IP3Q9UPT6 1336 aa22.35■■□□□ 1.17
GRAMD1B-213ENST00000633646 TAF7Q15545 349 aaPredicted RBP22.35■■□□□ 1.17
GRAMD1B-213ENST00000633646 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
GRAMD1B-213ENST00000633646 A1BGP04217 495 aa22.34■■□□□ 1.17
GRAMD1B-213ENST00000633646 EIF5P55010 431 aaKnown RBP22.34■■□□□ 1.17
GRAMD1B-213ENST00000633646 TEX13AQ9BXU3 409 aaPredicted RBP22.34■■□□□ 1.17
GRAMD1B-213ENST00000633646 WWC3Q9ULE0 1092 aa22.34■■□□□ 1.17
GRAMD1B-213ENST00000633646 ZPR1O75312 459 aa22.33■■□□□ 1.17
GRAMD1B-213ENST00000633646 DDR1Q08345 913 aa22.33■■□□□ 1.17
GRAMD1B-213ENST00000633646 CCDC146Q8IYE0 955 aa22.33■■□□□ 1.17
GRAMD1B-213ENST00000633646 BCL2L12Q9HB09 334 aa22.33■■□□□ 1.17
GRAMD1B-213ENST00000633646 NARFQ9UHQ1 456 aa22.33■■□□□ 1.17
GRAMD1B-213ENST00000633646 PARP3Q9Y6F1 533 aa22.33■■□□□ 1.17
GRAMD1B-213ENST00000633646 UTRNP46939 3433 aa22.33■■□□□ 1.16
GRAMD1B-213ENST00000633646 TM4SF1P30408 202 aa22.31■■□□□ 1.16
GRAMD1B-213ENST00000633646 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
GRAMD1B-213ENST00000633646 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
GRAMD1B-213ENST00000633646 RIPK4P57078 832 aa22.3■■□□□ 1.16
GRAMD1B-213ENST00000633646 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
GRAMD1B-213ENST00000633646 C10orf71Q711Q0 1435 aa22.3■■□□□ 1.16
GRAMD1B-213ENST00000633646 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
GRAMD1B-213ENST00000633646 POLRMTO00411 1230 aaKnown RBP22.29■■□□□ 1.16
GRAMD1B-213ENST00000633646 SNRPA1P09661 255 aaKnown RBP22.29■■□□□ 1.16
GRAMD1B-213ENST00000633646 TMPOP42166 694 aaKnown RBP22.29■■□□□ 1.16
GRAMD1B-213ENST00000633646 RRP7AQ9Y3A4 280 aaKnown RBP22.29■■□□□ 1.16
GRAMD1B-213ENST00000633646 IL6STP40189 918 aaPredicted RBP22.28■■□□□ 1.16
GRAMD1B-213ENST00000633646 NFIXQ14938 502 aa22.28■■□□□ 1.16
GRAMD1B-213ENST00000633646 TBC1D2BQ9UPU7 963 aa22.28■■□□□ 1.16
GRAMD1B-213ENST00000633646 KIAA1551Q9HCM1 1747 aa22.28■■□□□ 1.16
GRAMD1B-213ENST00000633646 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
GRAMD1B-213ENST00000633646 KIF13BQ9NQT8 1826 aa22.27■■□□□ 1.16
GRAMD1B-213ENST00000633646 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
GRAMD1B-213ENST00000633646 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
GRAMD1B-213ENST00000633646 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
GRAMD1B-213ENST00000633646 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 GOLGB1Q14789 3259 aaKnown RBP22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 GRIN3BO60391 1043 aa22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 DPEP1P16444 411 aa22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 TGFB2P61812 414 aa22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 CCDC184Q52MB2 194 aa22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 PNISRQ8TF01 805 aaKnown RBP22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 RUNDC1Q96C34 613 aa22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 N4BP2Q86UW6 1770 aaPredicted RBP22.25■■□□□ 1.15
GRAMD1B-213ENST00000633646 A0A087WZG4 1122 aa22.24■■□□□ 1.15
GRAMD1B-213ENST00000633646 NBPF26B4DH59 902 aa22.24■■□□□ 1.15
GRAMD1B-213ENST00000633646 NBPF10Q6P3W6 841 aaKnown RBP22.24■■□□□ 1.15
GRAMD1B-213ENST00000633646 BICDL1Q6ZP65 573 aa22.24■■□□□ 1.15
GRAMD1B-213ENST00000633646 NBPF15Q8N660 670 aa22.24■■□□□ 1.15
GRAMD1B-213ENST00000633646 CHD4Q14839 1912 aa22.22■■□□□ 1.15
GRAMD1B-213ENST00000633646 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
GRAMD1B-213ENST00000633646 KCNA3P22001 575 aa22.22■■□□□ 1.15
GRAMD1B-213ENST00000633646 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
GRAMD1B-213ENST00000633646 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
GRAMD1B-213ENST00000633646 SERPINB2P05120 415 aa22.21■■□□□ 1.15
GRAMD1B-213ENST00000633646 TRIM35Q9UPQ4 493 aa22.21■■□□□ 1.15
GRAMD1B-213ENST00000633646 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
GRAMD1B-213ENST00000633646 ZNF784Q8NCA9 323 aaPredicted RBP22.19■■□□□ 1.14
GRAMD1B-213ENST00000633646 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
GRAMD1B-213ENST00000633646 SCN7AQ01118 1682 aa22.19■■□□□ 1.14
GRAMD1B-213ENST00000633646 AFDNP55196 1824 aaKnown RBP22.19■■□□□ 1.14
GRAMD1B-213ENST00000633646 CHRNA5P30532 468 aa22.18■■□□□ 1.14
GRAMD1B-213ENST00000633646 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
GRAMD1B-213ENST00000633646 NPM2Q86SE8 214 aaKnown RBP22.18■■□□□ 1.14
GRAMD1B-213ENST00000633646 BCS1LQ9Y276 419 aa22.18■■□□□ 1.14
GRAMD1B-213ENST00000633646 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
GRAMD1B-213ENST00000633646 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
GRAMD1B-213ENST00000633646 LAMB4A4D0S4 1761 aa22.16■■□□□ 1.14
GRAMD1B-213ENST00000633646 APAF1O14727 1248 aa22.15■■□□□ 1.14
GRAMD1B-213ENST00000633646 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
GRAMD1B-213ENST00000633646 NGEFQ8N5V2 710 aa22.14■■□□□ 1.13
GRAMD1B-213ENST00000633646 BCORQ6W2J9 1755 aa22.14■■□□□ 1.13
GRAMD1B-213ENST00000633646 BRCA1P38398 1863 aaKnown RBP22.13■■□□□ 1.13
GRAMD1B-213ENST00000633646 BABAM1Q9NWV8 329 aa22.13■■□□□ 1.13
GRAMD1B-213ENST00000633646 PIM2Q9P1W9 311 aa22.13■■□□□ 1.13
GRAMD1B-213ENST00000633646 CHL1O00533 1208 aa22.12■■□□□ 1.13
GRAMD1B-213ENST00000633646 HLFQ16534 295 aa22.12■■□□□ 1.13
GRAMD1B-213ENST00000633646 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
GRAMD1B-213ENST00000633646 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
GRAMD1B-213ENST00000633646 LAS1LQ9Y4W2 734 aaKnown RBP22.12■■□□□ 1.13
GRAMD1B-213ENST00000633646 MYL6BP14649 208 aa22.11■■□□□ 1.13
GRAMD1B-213ENST00000633646 PRR5LQ6MZQ0 368 aa22.11■■□□□ 1.13
GRAMD1B-213ENST00000633646 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
GRAMD1B-213ENST00000633646 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
GRAMD1B-213ENST00000633646 TTLL7Q6ZT98 887 aa22.1■■□□□ 1.13
GRAMD1B-213ENST00000633646 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
GRAMD1B-213ENST00000633646 ANP32CO43423 234 aa22.09■■□□□ 1.13
GRAMD1B-213ENST00000633646 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
GRAMD1B-213ENST00000633646 PDIA6Q15084 440 aa22.08■■□□□ 1.13
GRAMD1B-213ENST00000633646 ARHGAP27Q6ZUM4 889 aa22.08■■□□□ 1.13
GRAMD1B-213ENST00000633646 ANXA1P04083 346 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms