RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 USP17L21D6R901 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L18D6R9N7 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L22D6RA61 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L17D6RBQ6 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L19D6RCP7 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L20D6RJB6 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 HIRAP54198 1017 aaPredicted RBP6.73□□□□□ -1.33
SRP54-214ENST00000630962 EPHA4P54764 986 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 SRSF11Q05519 484 aaKnown RBP6.73□□□□□ -1.33
SRP54-214ENST00000630962 USP17L24Q0WX57 530 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 PTK7Q13308 1070 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 DBN1Q16643 649 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 HIF1AQ16665 826 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 CFAP70Q5T0N1 1121 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 ANKMY2Q8IV38 441 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 COL25A1Q9BXS0 654 aaPredicted RBP6.73□□□□□ -1.33
SRP54-214ENST00000630962 MBIPQ9NS73 344 aa6.73□□□□□ -1.33
SRP54-214ENST00000630962 STAU1O95793 577 aaKnown RBP6.72□□□□□ -1.33
SRP54-214ENST00000630962 NOS2P35228 1153 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 ELOAQ14241 798 aaKnown RBP6.72□□□□□ -1.33
SRP54-214ENST00000630962 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 SLC9A9Q8IVB4 645 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 FAM200AQ8TCP9 573 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 GPAMQ9HCL2 828 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 NEUROD4Q9HD90 331 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.72□□□□□ -1.33
SRP54-214ENST00000630962 ZNF232Q9UNY5 417 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 KIAA1024Q9UPX6 916 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 GJA3Q9Y6H8 435 aa6.72□□□□□ -1.33
SRP54-214ENST00000630962 ARSJQ5FYB0 599 aaPredicted RBP6.71□□□□□ -1.34
SRP54-214ENST00000630962 TNS4Q8IZW8 715 aa6.71□□□□□ -1.34
SRP54-214ENST00000630962 L3MBTL2Q969R5 705 aa6.71□□□□□ -1.34
SRP54-214ENST00000630962 CNTNAP3BQ96NU0 1288 aa6.71□□□□□ -1.34
SRP54-214ENST00000630962 CNTNAP3Q9BZ76 1288 aa6.71□□□□□ -1.34
SRP54-214ENST00000630962 CUEDC1Q9NWM3 386 aaPredicted RBP6.71□□□□□ -1.34
SRP54-214ENST00000630962 ANKIB1Q9P2G1 1089 aa6.71□□□□□ -1.34
SRP54-214ENST00000630962 ATXN7L1Q9ULK2 861 aaPredicted RBP6.71□□□□□ -1.34
SRP54-214ENST00000630962 DKK1O94907 266 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 MAP2K3P46734 347 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 DPYDQ12882 1025 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 SWI5Q1ZZU3 235 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 CRTC2Q53ET0 693 aaPredicted RBP6.7□□□□□ -1.34
SRP54-214ENST00000630962 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 BICDL1Q6ZP65 573 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 GPR161Q8N6U8 529 aaKnown RBP6.7□□□□□ -1.34
SRP54-214ENST00000630962 GTPBP3Q969Y2 492 aaKnown RBP6.7□□□□□ -1.34
SRP54-214ENST00000630962 HINFPQ9BQA5 517 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 LRRC4BQ9NT99 713 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 PCDHGC4Q9Y5F7 938 aa6.7□□□□□ -1.34
SRP54-214ENST00000630962 SFI1A8K8P3 1242 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 PPP1R12BO60237 982 aaPredicted RBP6.69□□□□□ -1.34
SRP54-214ENST00000630962 SLURP2P0DP57 97 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 MX2P20592 715 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 IGFBP4P22692 258 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 LAMC2Q13753 1193 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 SAMD5Q5TGI4 173 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 POTEAQ6S8J7 498 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 TSEN2Q8NCE0 465 aaKnown RBP6.69□□□□□ -1.34
SRP54-214ENST00000630962 PBXIP1Q96AQ6 731 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 RUBCNLQ9H714 662 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 ENAMQ9NRM1 1142 aa6.69□□□□□ -1.34
SRP54-214ENST00000630962 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
SRP54-214ENST00000630962 PPP1R15AO75807 674 aaPredicted RBP6.68□□□□□ -1.34
SRP54-214ENST00000630962 ATG7O95352 703 aa6.68□□□□□ -1.34
SRP54-214ENST00000630962 ATP4AP20648 1035 aa6.68□□□□□ -1.34
SRP54-214ENST00000630962 TSPAN10Q9H1Z9 355 aaPredicted RBP6.68□□□□□ -1.34
SRP54-214ENST00000630962 ATAD2Q6PL18 1390 aa6.68□□□□□ -1.34
SRP54-214ENST00000630962 EML1O00423 815 aa6.67□□□□□ -1.34
SRP54-214ENST00000630962 ATXN7O15265 892 aaPredicted RBP6.67□□□□□ -1.34
SRP54-214ENST00000630962 FOXO3O43524 673 aa6.67□□□□□ -1.34
SRP54-214ENST00000630962 MAP3K10Q02779 954 aa6.67□□□□□ -1.34
SRP54-214ENST00000630962 SCG3Q8WXD2 468 aaKnown RBP6.67□□□□□ -1.34
SRP54-214ENST00000630962 VTI1AQ96AJ9 217 aa6.67□□□□□ -1.34
SRP54-214ENST00000630962 NOVA2Q9UNW9 492 aaKnown RBP6.67□□□□□ -1.34
SRP54-214ENST00000630962 ADAMTS2O95450 1211 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 RHPN1Q8TCX5 695 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 ZDHHC1Q8WTX9 485 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 ARXQ96QS3 562 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 ZIC5Q96T25 663 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 C2orf49Q9BVC5 232 aaPredicted RBP6.66□□□□□ -1.34
SRP54-214ENST00000630962 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
SRP54-214ENST00000630962 USP3Q9Y6I4 520 aa6.66□□□□□ -1.34
SRP54-214ENST00000630962 ACIN1Q9UKV3 1341 aaKnown RBP6.66□□□□□ -1.34
SRP54-214ENST00000630962 FGFR3P22607 806 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 KRT76Q01546 638 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 GAS6Q14393 721 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 RNFT1Q5M7Z0 435 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 FAM182BQ5T319 152 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 NDFIP2Q9NV92 336 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 GDF2Q9UK05 429 aaPredicted RBP6.65□□□□□ -1.34
SRP54-214ENST00000630962 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.34
SRP54-214ENST00000630962 IGF1RP08069 1367 aa6.65□□□□□ -1.35
SRP54-214ENST00000630962 GPR25O00155 361 aa6.64□□□□□ -1.35
SRP54-214ENST00000630962 UBAP2LQ14157 1087 aaKnown RBP6.64□□□□□ -1.35
SRP54-214ENST00000630962 AVENQ9NQS1 362 aaPredicted RBP6.64□□□□□ -1.35
SRP54-214ENST00000630962 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
SRP54-214ENST00000630962 BNIP3LO60238 219 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 BMP4P12644 408 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms