RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 KRTAP4-5Q9BYR2 181 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 CRISPLD1Q9H336 500 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 KDM2AQ9Y2K7 1162 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 PCDHB11Q9Y5F2 797 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 M0R082 166 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 ATXN7O15265 892 aaPredicted RBP3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 NID1P14543 1247 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 ELNP15502 786 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 SSTR4P31391 388 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 TNP2Q05952 138 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 GNASQ5JWF2 1037 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 ZNF468Q5VIY5 522 aaPredicted RBP3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 TMEM214Q6NUQ4 689 aaKnown RBP3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 ZNF417Q8TAU3 575 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 ZNF587Q96SQ5 575 aaPredicted RBP3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 SSBP4Q9BWG4 385 aaPredicted RBP3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 PCDHGC4Q9Y5F7 938 aa3.44□□□□□ -1.86
SPTAN1-216ENST00000629047 AP1G2O75843 785 aa3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 FBXO45P0C2W1 286 aa3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 TAL1P17542 331 aaPredicted RBP3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 JAG1P78504 1218 aa3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 TXNRD3Q86VQ6 643 aa3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 PROCA1Q8NCQ7 364 aaPredicted RBP3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 CDCA7Q9BWT1 371 aaPredicted RBP3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 OAS3Q9Y6K5 1087 aaKnown RBP3.43□□□□□ -1.86
SPTAN1-216ENST00000629047 ELOA3CA0A087WX78 387 aaPredicted RBP3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 ELOA3DA6NLF2 546 aaPredicted RBP3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 TULP1O00294 542 aaPredicted RBP3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 USP17L8P0C7I0 530 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 TRIM28Q13263 835 aaKnown RBP3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 ELOA3BQ3SY89 546 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 ELOA3Q8NG57 546 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 XAGE2Q96GT9 111 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 TRIM34Q9BYJ4 488 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 PCMTD2Q9NV79 361 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 RNF112Q9ULX5 631 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 RNF114Q9Y508 228 aa3.42□□□□□ -1.86
SPTAN1-216ENST00000629047 A0A1W2PNR3 127 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 SPDYE3A6NKU9 549 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 ADAMTS4O75173 837 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 MED26O95402 600 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 AMER1Q5JTC6 1135 aaPredicted RBP3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 FAM182BQ5T319 152 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 RAB44Q7Z6P3 723 aaPredicted RBP3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 SYT9Q86SS6 491 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 RHBDD1Q8TEB9 315 aa3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 ZC3H15Q8WU90 426 aaKnown RBP3.41□□□□□ -1.86
SPTAN1-216ENST00000629047 GNRH1P01148 92 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 IRAK1P51617 712 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 TLR1Q15399 786 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 FIGNL1Q6PIW4 674 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 TBC1D9Q6ZT07 1266 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 MICALL1Q8N3F8 863 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 CCDC85AQ96PX6 553 aaPredicted RBP3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 NACC1Q96RE7 527 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 ETNK1Q9HBU6 452 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 AVENQ9NQS1 362 aaPredicted RBP3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 PRR12Q9ULL5 1215 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 USP3Q9Y6I4 520 aa3.4□□□□□ -1.87
SPTAN1-216ENST00000629047 A0A0A0MRY4 1105 aa3.39□□□□□ -1.87
SPTAN1-216ENST00000629047 SOCS7O14512 581 aa3.39□□□□□ -1.87
SPTAN1-216ENST00000629047 PPARGC1BQ86YN6 1023 aaKnown RBP3.39□□□□□ -1.87
SPTAN1-216ENST00000629047 SLC30A3Q99726 388 aa3.39□□□□□ -1.87
SPTAN1-216ENST00000629047 C9orf172C9J069 976 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 EFSO43281 561 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 PDE4DQ08499 809 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 TSGA10IPQ3SY00 556 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 TRAPPC3LQ5T215 181 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 C20orf204Q6ZNR8 217 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 NLRP8Q86W28 1048 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 AIDAQ96BJ3 306 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 MEGF10Q96KG7 1140 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 ZIC5Q96T25 663 aa3.38□□□□□ -1.87
SPTAN1-216ENST00000629047 ZBBXA8MT70 800 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 FAM157BP0CG42 384 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 ADH7P40394 386 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 CD97P48960 835 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 ARSJQ5FYB0 599 aaPredicted RBP3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 ZNF295-AS1Q8N0V1 137 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 PRDM6Q9NQX0 595 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 MARK1Q9P0L2 795 aa3.37□□□□□ -1.87
SPTAN1-216ENST00000629047 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 ADARB2-AS1A8MUL3 147 aa3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 ALAS2P22557 587 aa3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 GTF2E1P29083 439 aaPredicted RBP3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 NOS3P29474 1203 aa3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 IREB2P48200 963 aaKnown RBP3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 GP2P55259 537 aaKnown RBP3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 SFSWAPQ12872 951 aaKnown RBP3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 LENG1Q96BZ8 264 aaPredicted RBP3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 USP21Q9UK80 565 aa3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 PARP3Q9Y6F1 533 aa3.36□□□□□ -1.87
SPTAN1-216ENST00000629047 GPR37L1O60883 481 aa3.35□□□□□ -1.87
SPTAN1-216ENST00000629047 SIN3BO75182 1162 aa3.35□□□□□ -1.87
SPTAN1-216ENST00000629047 TGFB1P01137 390 aa3.35□□□□□ -1.87
SPTAN1-216ENST00000629047 SCNN1DP51172 638 aa3.35□□□□□ -1.87
SPTAN1-216ENST00000629047 RNF20Q5VTR2 975 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms