RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 KRTAP9-6A0A140TA67 174 aa7.51□□□□□ -1.21
VPS8-228ENST00000628962 ATXN7O15265 892 aaPredicted RBP7.51□□□□□ -1.21
VPS8-228ENST00000628962 ADH6P28332 368 aa7.51□□□□□ -1.21
VPS8-228ENST00000628962 TRIM11Q96F44 468 aa7.51□□□□□ -1.21
VPS8-228ENST00000628962 SEMA6BQ9H3T3 888 aa7.51□□□□□ -1.21
VPS8-228ENST00000628962 CHIC2Q9UKJ5 165 aa7.51□□□□□ -1.21
VPS8-228ENST00000628962 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
VPS8-228ENST00000628962 MAPTP10636 758 aaKnown RBP7.5□□□□□ -1.21
VPS8-228ENST00000628962 SCNN1DP51172 638 aa7.5□□□□□ -1.21
VPS8-228ENST00000628962 TNP2Q05952 138 aa7.5□□□□□ -1.21
VPS8-228ENST00000628962 IL27Q8NEV9 243 aa7.5□□□□□ -1.21
VPS8-228ENST00000628962 SNRKQ9NRH2 765 aa7.5□□□□□ -1.21
VPS8-228ENST00000628962 INHAP05111 366 aa7.49□□□□□ -1.21
VPS8-228ENST00000628962 A0A1W2PNR3 127 aa7.48□□□□□ -1.21
VPS8-228ENST00000628962 DCDC2BA2VCK2 349 aa7.48□□□□□ -1.21
VPS8-228ENST00000628962 APBB1O00213 710 aa7.48□□□□□ -1.21
VPS8-228ENST00000628962 CD33P20138 364 aa7.48□□□□□ -1.21
VPS8-228ENST00000628962 GATA4P43694 442 aa7.48□□□□□ -1.21
VPS8-228ENST00000628962 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
VPS8-228ENST00000628962 NIFKQ9BYG3 293 aaKnown RBP7.48□□□□□ -1.21
VPS8-228ENST00000628962 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 GDF10P55107 478 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 AIDAQ96BJ3 306 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
VPS8-228ENST00000628962 KHNYNO15037 678 aaKnown RBP7.46□□□□□ -1.22
VPS8-228ENST00000628962 FAM157BP0CG42 384 aa7.46□□□□□ -1.22
VPS8-228ENST00000628962 EIF4G2P78344 907 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS8-228ENST00000628962 SLFNL1Q499Z3 407 aa7.46□□□□□ -1.22
VPS8-228ENST00000628962 ZNF468Q5VIY5 522 aaPredicted RBP7.46□□□□□ -1.22
VPS8-228ENST00000628962 SMTNP53814 917 aa7.45□□□□□ -1.22
VPS8-228ENST00000628962 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
VPS8-228ENST00000628962 RSPO4Q2I0M5 234 aaPredicted RBP7.45□□□□□ -1.22
VPS8-228ENST00000628962 ARSJQ5FYB0 599 aaPredicted RBP7.44□□□□□ -1.22
VPS8-228ENST00000628962 NKAPLQ5M9Q1 402 aa7.44□□□□□ -1.22
VPS8-228ENST00000628962 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
VPS8-228ENST00000628962 MDFIQ99750 246 aa7.44□□□□□ -1.22
VPS8-228ENST00000628962 ZDHHC3Q9NYG2 299 aa7.44□□□□□ -1.22
VPS8-228ENST00000628962 IQSEC3Q9UPP2 1182 aaPredicted RBP7.44□□□□□ -1.22
VPS8-228ENST00000628962 TBC1D2BQ9UPU7 963 aa7.44□□□□□ -1.22
VPS8-228ENST00000628962 EFSO43281 561 aa7.43□□□□□ -1.22
VPS8-228ENST00000628962 IRF5Q13568 498 aa7.43□□□□□ -1.22
VPS8-228ENST00000628962 MTFR1Q15390 333 aa7.43□□□□□ -1.22
VPS8-228ENST00000628962 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
VPS8-228ENST00000628962 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
VPS8-228ENST00000628962 SAMD5Q5TGI4 173 aa7.43□□□□□ -1.22
VPS8-228ENST00000628962 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
VPS8-228ENST00000628962 SLC4A9Q96Q91 983 aa7.43□□□□□ -1.22
VPS8-228ENST00000628962 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
VPS8-228ENST00000628962 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
VPS8-228ENST00000628962 NEUROD2Q15784 382 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 STRN4Q9NRL3 753 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 USP3Q9Y6I4 520 aa7.42□□□□□ -1.22
VPS8-228ENST00000628962 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
VPS8-228ENST00000628962 CDK2AP1O14519 115 aa7.41□□□□□ -1.22
VPS8-228ENST00000628962 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
VPS8-228ENST00000628962 LAMC2Q13753 1193 aa7.41□□□□□ -1.22
VPS8-228ENST00000628962 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
VPS8-228ENST00000628962 A6NJY4 79 aa7.4□□□□□ -1.22
VPS8-228ENST00000628962 MAP7D1Q3KQU3 841 aa7.4□□□□□ -1.22
VPS8-228ENST00000628962 SERTAD1Q9UHV2 236 aa7.4□□□□□ -1.22
VPS8-228ENST00000628962 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
VPS8-228ENST00000628962 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
VPS8-228ENST00000628962 KRTAP1-3Q8IUG1 177 aa7.39□□□□□ -1.23
VPS8-228ENST00000628962 GJA3Q9Y6H8 435 aa7.39□□□□□ -1.23
VPS8-228ENST00000628962 DYRK3O43781 588 aa7.38□□□□□ -1.23
VPS8-228ENST00000628962 ALAS2P22557 587 aa7.38□□□□□ -1.23
VPS8-228ENST00000628962 PRRT3Q5FWE3 981 aa7.38□□□□□ -1.23
VPS8-228ENST00000628962 SYT9Q86SS6 491 aa7.38□□□□□ -1.23
VPS8-228ENST00000628962 PLPP7Q8NBV4 271 aa7.38□□□□□ -1.23
VPS8-228ENST00000628962 CABP1Q9NZU7 370 aa7.38□□□□□ -1.23
VPS8-228ENST00000628962 SCO2A0A1W2PP80 73 aa7.37□□□□□ -1.23
VPS8-228ENST00000628962 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
VPS8-228ENST00000628962 SIN3BO75182 1162 aa7.37□□□□□ -1.23
VPS8-228ENST00000628962 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
VPS8-228ENST00000628962 APBA3O96018 575 aa7.36□□□□□ -1.23
VPS8-228ENST00000628962 TXLNAP40222 546 aa7.36□□□□□ -1.23
VPS8-228ENST00000628962 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
VPS8-228ENST00000628962 PRDM6Q9NQX0 595 aa7.36□□□□□ -1.23
VPS8-228ENST00000628962 ARTNQ5T4W7 220 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 TNFRSF25Q93038 417 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 KRTAP4-12Q9BQ66 201 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 PRM3Q9NNZ6 103 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 STARD13Q9Y3M8 1113 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 PCDHGA11Q9Y5H2 935 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
VPS8-228ENST00000628962 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
VPS8-228ENST00000628962 M0R082 166 aa7.34□□□□□ -1.23
VPS8-228ENST00000628962 BRPF1P55201 1214 aaPredicted RBP7.34□□□□□ -1.23
VPS8-228ENST00000628962 ZNF417Q8TAU3 575 aa7.34□□□□□ -1.23
VPS8-228ENST00000628962 ZDHHC1Q8WTX9 485 aa7.34□□□□□ -1.23
VPS8-228ENST00000628962 ZNF587Q96SQ5 575 aaPredicted RBP7.34□□□□□ -1.23
VPS8-228ENST00000628962 ZFP64Q9NPA5 681 aa7.34□□□□□ -1.23
VPS8-228ENST00000628962 EML1O00423 815 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms