RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 DCTN1Q14203 1278 aa21.05■□□□□ 0.96
CHRNA4-211ENST00000628606 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
CHRNA4-211ENST00000628606 ZBTB1Q9Y2K1 713 aa21.05■□□□□ 0.96
CHRNA4-211ENST00000628606 CHD4Q14839 1912 aa21.05■□□□□ 0.96
CHRNA4-211ENST00000628606 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
CHRNA4-211ENST00000628606 PLEKHF1Q96S99 279 aa21.04■□□□□ 0.96
CHRNA4-211ENST00000628606 COL15A1P39059 1388 aa21.03■□□□□ 0.96
CHRNA4-211ENST00000628606 A0A087WZG4 1122 aa21.03■□□□□ 0.96
CHRNA4-211ENST00000628606 TAF7Q15545 349 aaPredicted RBP21.03■□□□□ 0.96
CHRNA4-211ENST00000628606 FKBP8Q14318 412 aa21.02■□□□□ 0.96
CHRNA4-211ENST00000628606 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
CHRNA4-211ENST00000628606 USPL1Q5W0Q7 1092 aa21.02■□□□□ 0.96
CHRNA4-211ENST00000628606 NARFQ9UHQ1 456 aa21.02■□□□□ 0.96
CHRNA4-211ENST00000628606 KCNQ3O43525 872 aa21.01■□□□□ 0.95
CHRNA4-211ENST00000628606 PNISRQ8TF01 805 aaKnown RBP21.01■□□□□ 0.95
CHRNA4-211ENST00000628606 ZNF330Q9Y3S2 320 aaPredicted RBP21.01■□□□□ 0.95
CHRNA4-211ENST00000628606 UTRNP46939 3433 aa21■□□□□ 0.95
CHRNA4-211ENST00000628606 DLG5Q8TDM6 1919 aa21■□□□□ 0.95
CHRNA4-211ENST00000628606 GOLGB1Q14789 3259 aaKnown RBP21■□□□□ 0.95
CHRNA4-211ENST00000628606 SNRPA1P09661 255 aaKnown RBP20.99■□□□□ 0.95
CHRNA4-211ENST00000628606 YBX3P16989 372 aaKnown RBP eCLIP20.99■□□□□ 0.95
CHRNA4-211ENST00000628606 TGFB2P61812 414 aa20.99■□□□□ 0.95
CHRNA4-211ENST00000628606 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
CHRNA4-211ENST00000628606 EIF5P55010 431 aaKnown RBP20.98■□□□□ 0.95
CHRNA4-211ENST00000628606 IL6STP40189 918 aaPredicted RBP20.97■□□□□ 0.95
CHRNA4-211ENST00000628606 A1BGP04217 495 aa20.96■□□□□ 0.95
CHRNA4-211ENST00000628606 RIPK4P57078 832 aa20.96■□□□□ 0.95
CHRNA4-211ENST00000628606 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
CHRNA4-211ENST00000628606 MIS18AQ9NYP9 233 aa20.96■□□□□ 0.95
CHRNA4-211ENST00000628606 WWC3Q9ULE0 1092 aa20.96■□□□□ 0.95
CHRNA4-211ENST00000628606 TM4SF1P30408 202 aa20.95■□□□□ 0.94
CHRNA4-211ENST00000628606 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
CHRNA4-211ENST00000628606 C10orf71Q711Q0 1435 aa20.95■□□□□ 0.94
CHRNA4-211ENST00000628606 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
CHRNA4-211ENST00000628606 A0A0G2JLW4 131 aa20.94■□□□□ 0.94
CHRNA4-211ENST00000628606 POLRMTO00411 1230 aaKnown RBP20.94■□□□□ 0.94
CHRNA4-211ENST00000628606 DDR1Q08345 913 aa20.94■□□□□ 0.94
CHRNA4-211ENST00000628606 NFIXQ14938 502 aa20.93■□□□□ 0.94
CHRNA4-211ENST00000628606 THUMPD2Q9BTF0 503 aaKnown RBP20.93■□□□□ 0.94
CHRNA4-211ENST00000628606 TBC1D2BQ9UPU7 963 aa20.93■□□□□ 0.94
CHRNA4-211ENST00000628606 TMPOP42166 694 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-211ENST00000628606 CCDC146Q8IYE0 955 aa20.92■□□□□ 0.94
CHRNA4-211ENST00000628606 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
CHRNA4-211ENST00000628606 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 PRAMEF22A3QJZ6 481 aa20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 DPEP1P16444 411 aa20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 NEUROD2Q15784 382 aa20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 BICDL1Q6ZP65 573 aa20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 BCS1LQ9Y276 419 aa20.91■□□□□ 0.94
CHRNA4-211ENST00000628606 SERPINB2P05120 415 aa20.9■□□□□ 0.94
CHRNA4-211ENST00000628606 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
CHRNA4-211ENST00000628606 ZNF784Q8NCA9 323 aaPredicted RBP20.9■□□□□ 0.94
CHRNA4-211ENST00000628606 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
CHRNA4-211ENST00000628606 ADAMTS8Q9UP79 889 aa20.9■□□□□ 0.94
CHRNA4-211ENST00000628606 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
CHRNA4-211ENST00000628606 NPHP1O15259 732 aa20.88■□□□□ 0.93
CHRNA4-211ENST00000628606 PIP4K2AP48426 406 aaPredicted RBP20.88■□□□□ 0.93
CHRNA4-211ENST00000628606 PIM2Q9P1W9 311 aa20.88■□□□□ 0.93
CHRNA4-211ENST00000628606 RRP7AQ9Y3A4 280 aaKnown RBP20.88■□□□□ 0.93
CHRNA4-211ENST00000628606 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-211ENST00000628606 SETDB2Q96T68 719 aa20.87■□□□□ 0.93
CHRNA4-211ENST00000628606 ZNF652Q9Y2D9 606 aa20.87■□□□□ 0.93
CHRNA4-211ENST00000628606 GIGYF1O75420 1035 aaPredicted RBP20.86■□□□□ 0.93
CHRNA4-211ENST00000628606 CAMTA2O94983 1202 aa20.86■□□□□ 0.93
CHRNA4-211ENST00000628606 TBC1D9BQ66K14 1250 aa20.86■□□□□ 0.93
CHRNA4-211ENST00000628606 BABAM1Q9NWV8 329 aa20.86■□□□□ 0.93
CHRNA4-211ENST00000628606 KDM3BQ7LBC6 1761 aa20.86■□□□□ 0.93
CHRNA4-211ENST00000628606 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
CHRNA4-211ENST00000628606 DALRD3Q5D0E6 543 aaKnown RBP20.84■□□□□ 0.93
CHRNA4-211ENST00000628606 CLEC4GQ6UXB4 293 aa20.84■□□□□ 0.93
CHRNA4-211ENST00000628606 KIAA1551Q9HCM1 1747 aa20.84■□□□□ 0.93
CHRNA4-211ENST00000628606 CARMIL3Q8ND23 1372 aa20.84■□□□□ 0.93
CHRNA4-211ENST00000628606 SCN7AQ01118 1682 aa20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 NBPF26B4DH59 902 aa20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 KCNA3P22001 575 aa20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 CHRNA5P30532 468 aa20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 NBPF10Q6P3W6 841 aaKnown RBP20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 ARHGAP27Q6ZUM4 889 aa20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 NBPF15Q8N660 670 aa20.83■□□□□ 0.93
CHRNA4-211ENST00000628606 LAMB4A4D0S4 1761 aa20.82■□□□□ 0.92
CHRNA4-211ENST00000628606 ANP32CO43423 234 aa20.82■□□□□ 0.92
CHRNA4-211ENST00000628606 NGEFQ8N5V2 710 aa20.82■□□□□ 0.92
CHRNA4-211ENST00000628606 LAS1LQ9Y4W2 734 aaKnown RBP20.82■□□□□ 0.92
CHRNA4-211ENST00000628606 H0YIN7 160 aa20.81■□□□□ 0.92
CHRNA4-211ENST00000628606 NRXN2Q9P2S2 1712 aa20.81■□□□□ 0.92
CHRNA4-211ENST00000628606 PDE6BP35913 854 aa20.8■□□□□ 0.92
CHRNA4-211ENST00000628606 ST5P78524 1137 aa20.8■□□□□ 0.92
CHRNA4-211ENST00000628606 CNBD1Q8NA66 436 aa20.8■□□□□ 0.92
CHRNA4-211ENST00000628606 PDZRN3Q9UPQ7 1066 aa20.8■□□□□ 0.92
CHRNA4-211ENST00000628606 BRCA1P38398 1863 aaKnown RBP20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 RGL2O15211 777 aa20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 MYL6BP14649 208 aa20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 KIF6Q6ZMV9 814 aa20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 C2CD5Q86YS7 1000 aa20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 TRIM35Q9UPQ4 493 aa20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 BCORQ6W2J9 1755 aa20.79■□□□□ 0.92
CHRNA4-211ENST00000628606 EIF2S2P20042 333 aaKnown RBP20.78■□□□□ 0.92
CHRNA4-211ENST00000628606 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms