RNA–Protein interactions for RNA: ENST00000627680.2

CCNC-219, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-219ENST00000627680 SRP68Q9UHB9 627 aaKnown RBP23.55■■□□□ 1.36
CCNC-219ENST00000627680 UTRNP46939 3433 aa23.55■■□□□ 1.36
CCNC-219ENST00000627680 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
CCNC-219ENST00000627680 COL15A1P39059 1388 aa23.52■■□□□ 1.36
CCNC-219ENST00000627680 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
CCNC-219ENST00000627680 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
CCNC-219ENST00000627680 RIPK4P57078 832 aa23.52■■□□□ 1.36
CCNC-219ENST00000627680 PNISRQ8TF01 805 aaKnown RBP23.52■■□□□ 1.36
CCNC-219ENST00000627680 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
CCNC-219ENST00000627680 CANXP27824 592 aaKnown RBP23.51■■□□□ 1.35
CCNC-219ENST00000627680 FKBP8Q14318 412 aa23.51■■□□□ 1.35
CCNC-219ENST00000627680 THUMPD2Q9BTF0 503 aaKnown RBP23.51■■□□□ 1.35
CCNC-219ENST00000627680 NARFQ9UHQ1 456 aa23.51■■□□□ 1.35
CCNC-219ENST00000627680 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
CCNC-219ENST00000627680 C4AP0C0L4 1744 aa23.5■■□□□ 1.35
CCNC-219ENST00000627680 ZPR1O75312 459 aa23.5■■□□□ 1.35
CCNC-219ENST00000627680 CCDC146Q8IYE0 955 aa23.5■■□□□ 1.35
CCNC-219ENST00000627680 RUNDC1Q96C34 613 aa23.5■■□□□ 1.35
CCNC-219ENST00000627680 MIS18AQ9NYP9 233 aa23.5■■□□□ 1.35
CCNC-219ENST00000627680 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
CCNC-219ENST00000627680 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
CCNC-219ENST00000627680 PRAMEF22A3QJZ6 481 aa23.48■■□□□ 1.35
CCNC-219ENST00000627680 A1BGP04217 495 aa23.48■■□□□ 1.35
CCNC-219ENST00000627680 IL6STP40189 918 aaPredicted RBP23.48■■□□□ 1.35
CCNC-219ENST00000627680 PARP3Q9Y6F1 533 aa23.48■■□□□ 1.35
CCNC-219ENST00000627680 A0A087WZG4 1122 aa23.47■■□□□ 1.35
CCNC-219ENST00000627680 TM4SF1P30408 202 aa23.47■■□□□ 1.35
CCNC-219ENST00000627680 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
CCNC-219ENST00000627680 GPR162Q16538 588 aa23.47■■□□□ 1.35
CCNC-219ENST00000627680 DLG5Q8TDM6 1919 aa23.46■■□□□ 1.35
CCNC-219ENST00000627680 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
CCNC-219ENST00000627680 DDR1Q08345 913 aa23.45■■□□□ 1.34
CCNC-219ENST00000627680 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
CCNC-219ENST00000627680 C10orf71Q711Q0 1435 aa23.44■■□□□ 1.34
CCNC-219ENST00000627680 EIF4A1P60842 406 aaKnown RBP23.44■■□□□ 1.34
CCNC-219ENST00000627680 POLRMTO00411 1230 aaKnown RBP23.43■■□□□ 1.34
CCNC-219ENST00000627680 BABAM1Q9NWV8 329 aa23.43■■□□□ 1.34
CCNC-219ENST00000627680 GIGYF1O75420 1035 aaPredicted RBP23.42■■□□□ 1.34
CCNC-219ENST00000627680 YBX3P16989 372 aaKnown RBP eCLIP23.42■■□□□ 1.342e-8■□□□□ 9.1
CCNC-219ENST00000627680 TGFB2P61812 414 aa23.42■■□□□ 1.34
CCNC-219ENST00000627680 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
CCNC-219ENST00000627680 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
CCNC-219ENST00000627680 TRIM35Q9UPQ4 493 aa23.42■■□□□ 1.34
CCNC-219ENST00000627680 YY1P25490 414 aa23.41■■□□□ 1.34
CCNC-219ENST00000627680 NFIXQ14938 502 aa23.41■■□□□ 1.34
CCNC-219ENST00000627680 CCDC184Q52MB2 194 aa23.41■■□□□ 1.34
CCNC-219ENST00000627680 ANP32CO43423 234 aa23.4■■□□□ 1.34
CCNC-219ENST00000627680 NPM2Q86SE8 214 aaKnown RBP23.4■■□□□ 1.34
CCNC-219ENST00000627680 TSPYL4Q9UJ04 414 aa23.4■■□□□ 1.34
CCNC-219ENST00000627680 TBC1D2BQ9UPU7 963 aa23.4■■□□□ 1.34
CCNC-219ENST00000627680 ZNF330Q9Y3S2 320 aaPredicted RBP23.4■■□□□ 1.34
CCNC-219ENST00000627680 NBPF26B4DH59 902 aa23.39■■□□□ 1.33
CCNC-219ENST00000627680 GRIN3BO60391 1043 aa23.39■■□□□ 1.33
CCNC-219ENST00000627680 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
CCNC-219ENST00000627680 NBPF10Q6P3W6 841 aaKnown RBP23.39■■□□□ 1.33
CCNC-219ENST00000627680 NBPF15Q8N660 670 aa23.39■■□□□ 1.33
CCNC-219ENST00000627680 KDM3BQ7LBC6 1761 aa23.39■■□□□ 1.33
CCNC-219ENST00000627680 PXDNLA1KZ92 1463 aa23.38■■□□□ 1.33
CCNC-219ENST00000627680 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
CCNC-219ENST00000627680 DZIP3Q86Y13 1208 aaKnown RBP23.36■■□□□ 1.33
CCNC-219ENST00000627680 KIF13BQ9NQT8 1826 aa23.36■■□□□ 1.33
CCNC-219ENST00000627680 CHL1O00533 1208 aa23.35■■□□□ 1.33
CCNC-219ENST00000627680 APAF1O14727 1248 aa23.35■■□□□ 1.33
CCNC-219ENST00000627680 TBC1D9BQ66K14 1250 aa23.35■■□□□ 1.33
CCNC-219ENST00000627680 A0A0G2JLW4 131 aa23.34■■□□□ 1.33
CCNC-219ENST00000627680 SERPINB2P05120 415 aa23.34■■□□□ 1.33
CCNC-219ENST00000627680 DPEP1P16444 411 aa23.34■■□□□ 1.33
CCNC-219ENST00000627680 RGL2O15211 777 aa23.32■■□□□ 1.32
CCNC-219ENST00000627680 KCNA3P22001 575 aa23.32■■□□□ 1.32
CCNC-219ENST00000627680 CLEC4GQ6UXB4 293 aa23.32■■□□□ 1.32
CCNC-219ENST00000627680 BICDL1Q6ZP65 573 aa23.32■■□□□ 1.32
CCNC-219ENST00000627680 SCN7AQ01118 1682 aa23.32■■□□□ 1.32
CCNC-219ENST00000627680 KIAA1551Q9HCM1 1747 aa23.31■■□□□ 1.32
CCNC-219ENST00000627680 MRS2Q9HD23 443 aa23.31■■□□□ 1.32
CCNC-219ENST00000627680 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
CCNC-219ENST00000627680 ERBB4Q15303 1308 aa23.3■■□□□ 1.32
CCNC-219ENST00000627680 CARMIL3Q8ND23 1372 aa23.29■■□□□ 1.32
CCNC-219ENST00000627680 CFAP44Q96MT7 982 aa23.29■■□□□ 1.32
CCNC-219ENST00000627680 LAMB4A4D0S4 1761 aa23.29■■□□□ 1.32
CCNC-219ENST00000627680 NRXN2Q9P2S2 1712 aa23.28■■□□□ 1.32
CCNC-219ENST00000627680 SETDB2Q96T68 719 aa23.28■■□□□ 1.32
CCNC-219ENST00000627680 ZNF652Q9Y2D9 606 aa23.28■■□□□ 1.32
CCNC-219ENST00000627680 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
CCNC-219ENST00000627680 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
CCNC-219ENST00000627680 CHRNA5P30532 468 aa23.26■■□□□ 1.31
CCNC-219ENST00000627680 PIM2Q9P1W9 311 aa23.26■■□□□ 1.31
CCNC-219ENST00000627680 BCS1LQ9Y276 419 aa23.26■■□□□ 1.31
CCNC-219ENST00000627680 ERVV-1B6SEH8 477 aa23.25■■□□□ 1.31
CCNC-219ENST00000627680 MYL6BP14649 208 aa23.25■■□□□ 1.31
CCNC-219ENST00000627680 EIF2S2P20042 333 aaKnown RBP23.25■■□□□ 1.31
CCNC-219ENST00000627680 CALD1Q05682 793 aaKnown RBP23.25■■□□□ 1.31
CCNC-219ENST00000627680 PDIA6Q15084 440 aa23.25■■□□□ 1.31
CCNC-219ENST00000627680 PRR5LQ6MZQ0 368 aa23.25■■□□□ 1.31
CCNC-219ENST00000627680 LRP10Q7Z4F1 713 aa23.25■■□□□ 1.31
CCNC-219ENST00000627680 BCORQ6W2J9 1755 aa23.24■■□□□ 1.31
CCNC-219ENST00000627680 HLFQ16534 295 aa23.24■■□□□ 1.31
CCNC-219ENST00000627680 KRT24Q2M2I5 525 aa23.24■■□□□ 1.31
CCNC-219ENST00000627680 NGEFQ8N5V2 710 aa23.24■■□□□ 1.31
CCNC-219ENST00000627680 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
CCNC-219ENST00000627680 N4BP2Q86UW6 1770 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms