RNA–Protein interactions for RNA: ENST00000627501.2

SOX2-OT-242, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 775 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-242ENST00000627501 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
SOX2-OT-242ENST00000627501 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
SOX2-OT-242ENST00000627501 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
SOX2-OT-242ENST00000627501 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
SOX2-OT-242ENST00000627501 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-242ENST00000627501 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
SOX2-OT-242ENST00000627501 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
SOX2-OT-242ENST00000627501 RALBP1Q15311 655 aa18.31■□□□□ 0.52
SOX2-OT-242ENST00000627501 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
SOX2-OT-242ENST00000627501 A1BGP04217 495 aa18.3■□□□□ 0.52
SOX2-OT-242ENST00000627501 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
SOX2-OT-242ENST00000627501 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
SOX2-OT-242ENST00000627501 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
SOX2-OT-242ENST00000627501 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
SOX2-OT-242ENST00000627501 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
SOX2-OT-242ENST00000627501 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-242ENST00000627501 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-242ENST00000627501 EIF5P55010 431 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-242ENST00000627501 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
SOX2-OT-242ENST00000627501 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
SOX2-OT-242ENST00000627501 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
SOX2-OT-242ENST00000627501 KIAA1551Q9HCM1 1747 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 ZPR1O75312 459 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 DPEP1P16444 411 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 NFIXQ14938 502 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
SOX2-OT-242ENST00000627501 STARD3NLO95772 234 aa18.26■□□□□ 0.51
SOX2-OT-242ENST00000627501 RRP7AQ9Y3A4 280 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-242ENST00000627501 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
SOX2-OT-242ENST00000627501 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
SOX2-OT-242ENST00000627501 KCNA3P22001 575 aa18.24■□□□□ 0.51
SOX2-OT-242ENST00000627501 CHRNA5P30532 468 aa18.24■□□□□ 0.51
SOX2-OT-242ENST00000627501 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
SOX2-OT-242ENST00000627501 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
SOX2-OT-242ENST00000627501 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
SOX2-OT-242ENST00000627501 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
SOX2-OT-242ENST00000627501 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-242ENST00000627501 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
SOX2-OT-242ENST00000627501 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
SOX2-OT-242ENST00000627501 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
SOX2-OT-242ENST00000627501 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
SOX2-OT-242ENST00000627501 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
SOX2-OT-242ENST00000627501 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
SOX2-OT-242ENST00000627501 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
SOX2-OT-242ENST00000627501 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
SOX2-OT-242ENST00000627501 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 NEFMP07197 916 aa18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 RIPK4P57078 832 aa18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 TGFB2P61812 414 aa18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 KIF13BQ9NQT8 1826 aa18.2■□□□□ 0.5
SOX2-OT-242ENST00000627501 SERPINB2P05120 415 aa18.19■□□□□ 0.5
SOX2-OT-242ENST00000627501 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
SOX2-OT-242ENST00000627501 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
SOX2-OT-242ENST00000627501 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
SOX2-OT-242ENST00000627501 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
SOX2-OT-242ENST00000627501 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
SOX2-OT-242ENST00000627501 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
SOX2-OT-242ENST00000627501 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
SOX2-OT-242ENST00000627501 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
SOX2-OT-242ENST00000627501 A0A087WZG4 1122 aa18.17■□□□□ 0.5
SOX2-OT-242ENST00000627501 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
SOX2-OT-242ENST00000627501 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
SOX2-OT-242ENST00000627501 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
SOX2-OT-242ENST00000627501 ADCY9O60503 1353 aa18.16■□□□□ 0.5
SOX2-OT-242ENST00000627501 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
SOX2-OT-242ENST00000627501 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
SOX2-OT-242ENST00000627501 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
SOX2-OT-242ENST00000627501 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.5
SOX2-OT-242ENST00000627501 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
SOX2-OT-242ENST00000627501 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
SOX2-OT-242ENST00000627501 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SOX2-OT-242ENST00000627501 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
SOX2-OT-242ENST00000627501 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
SOX2-OT-242ENST00000627501 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
SOX2-OT-242ENST00000627501 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
SOX2-OT-242ENST00000627501 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
SOX2-OT-242ENST00000627501 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
SOX2-OT-242ENST00000627501 PIM2Q9P1W9 311 aa18.13■□□□□ 0.49
SOX2-OT-242ENST00000627501 CHD4Q14839 1912 aa18.13■□□□□ 0.49
SOX2-OT-242ENST00000627501 HLFQ16534 295 aa18.12■□□□□ 0.49
SOX2-OT-242ENST00000627501 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
SOX2-OT-242ENST00000627501 MYL6BP14649 208 aa18.11■□□□□ 0.49
SOX2-OT-242ENST00000627501 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
SOX2-OT-242ENST00000627501 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
SOX2-OT-242ENST00000627501 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
SOX2-OT-242ENST00000627501 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
SOX2-OT-242ENST00000627501 ANXA1P04083 346 aa18.1■□□□□ 0.49
SOX2-OT-242ENST00000627501 PROSER3Q2NL68 480 aa18.1■□□□□ 0.49
SOX2-OT-242ENST00000627501 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
SOX2-OT-242ENST00000627501 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
SOX2-OT-242ENST00000627501 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
SOX2-OT-242ENST00000627501 RASSF7Q02833 373 aa18.09■□□□□ 0.49
SOX2-OT-242ENST00000627501 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
SOX2-OT-242ENST00000627501 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
SOX2-OT-242ENST00000627501 BRCA1P38398 1863 aaKnown RBP18.09■□□□□ 0.49
SOX2-OT-242ENST00000627501 LAMB4A4D0S4 1761 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms