RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 ADH6P28332 368 aa7.11□□□□□ -1.27
PTP4A2-220ENST00000627328 GPR37L1O60883 481 aa7.1□□□□□ -1.27
PTP4A2-220ENST00000627328 NDFIP2Q9NV92 336 aa7.1□□□□□ -1.27
PTP4A2-220ENST00000627328 AVENQ9NQS1 362 aaPredicted RBP7.09□□□□□ -1.27
PTP4A2-220ENST00000627328 BNIP3LO60238 219 aa7.08□□□□□ -1.28
PTP4A2-220ENST00000627328 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
PTP4A2-220ENST00000627328 LAMC2Q13753 1193 aa7.08□□□□□ -1.28
PTP4A2-220ENST00000627328 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTP4A2-220ENST00000627328 CYP2U1Q7Z449 544 aa7.07□□□□□ -1.28
PTP4A2-220ENST00000627328 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
PTP4A2-220ENST00000627328 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
PTP4A2-220ENST00000627328 TBC1D2BQ9UPU7 963 aa7.06□□□□□ -1.28
PTP4A2-220ENST00000627328 ERVK-9P63128 1117 aa7.05□□□□□ -1.28
PTP4A2-220ENST00000627328 WASHC4Q2M389 1173 aa7.05□□□□□ -1.28
PTP4A2-220ENST00000627328 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
PTP4A2-220ENST00000627328 MCM6Q14566 821 aa7.04□□□□□ -1.28
PTP4A2-220ENST00000627328 FCHSD1Q86WN1 690 aa7.04□□□□□ -1.28
PTP4A2-220ENST00000627328 ESF1Q9H501 851 aaKnown RBP7.04□□□□□ -1.28
PTP4A2-220ENST00000627328 CEP126Q9P2H0 1117 aa7.04□□□□□ -1.28
PTP4A2-220ENST00000627328 RNF112Q9ULX5 631 aa7.04□□□□□ -1.28
PTP4A2-220ENST00000627328 C9orf172C9J069 976 aa7.03□□□□□ -1.28
PTP4A2-220ENST00000627328 GTF2E1P29083 439 aaPredicted RBP7.03□□□□□ -1.28
PTP4A2-220ENST00000627328 SOX11P35716 441 aa7.03□□□□□ -1.28
PTP4A2-220ENST00000627328 PHKA2P46019 1235 aa7.03□□□□□ -1.28
PTP4A2-220ENST00000627328 IRAK1P51617 712 aa7.03□□□□□ -1.28
PTP4A2-220ENST00000627328 TRIM28Q13263 835 aaKnown RBP7.03□□□□□ -1.28
PTP4A2-220ENST00000627328 MSX1P28360 303 aa7.02□□□□□ -1.29
PTP4A2-220ENST00000627328 IRF5Q13568 498 aa7.02□□□□□ -1.29
PTP4A2-220ENST00000627328 GNASQ5JWF2 1037 aa7.02□□□□□ -1.29
PTP4A2-220ENST00000627328 FAM182BQ5T319 152 aa7.02□□□□□ -1.29
PTP4A2-220ENST00000627328 PCDHB11Q9Y5F2 797 aa7.02□□□□□ -1.29
PTP4A2-220ENST00000627328 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
PTP4A2-220ENST00000627328 FLIIQ13045 1269 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 WWC1Q8IX03 1113 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 CRISPLD1Q9H336 500 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 GDPD2Q9HCC8 539 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 ARHGEF10LQ9HCE6 1279 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 KLF15Q9UIH9 416 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 RNF114Q9Y508 228 aa7.01□□□□□ -1.29
PTP4A2-220ENST00000627328 MYCP01106 439 aaPredicted RBP7□□□□□ -1.29
PTP4A2-220ENST00000627328 ALAS2P22557 587 aa7□□□□□ -1.29
PTP4A2-220ENST00000627328 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
PTP4A2-220ENST00000627328 ZSCAN10Q96SZ4 725 aaPredicted RBP7□□□□□ -1.29
PTP4A2-220ENST00000627328 TRAK2O60296 914 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 GNRH1P01148 92 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 ABL2P42684 1182 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 SLFNL1Q499Z3 407 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 SIRT1Q96EB6 747 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 ESYT1Q9BSJ8 1104 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 PCMTD2Q9NV79 361 aa6.99□□□□□ -1.29
PTP4A2-220ENST00000627328 CENPCQ03188 943 aa6.98□□□□□ -1.29
PTP4A2-220ENST00000627328 USP4Q13107 963 aa6.98□□□□□ -1.29
PTP4A2-220ENST00000627328 ADGRE1Q14246 886 aa6.98□□□□□ -1.29
PTP4A2-220ENST00000627328 TXNRD3Q86VQ6 643 aa6.98□□□□□ -1.29
PTP4A2-220ENST00000627328 PHTF2Q8N3S3 785 aa6.98□□□□□ -1.29
PTP4A2-220ENST00000627328 CHIC2Q9UKJ5 165 aa6.98□□□□□ -1.29
PTP4A2-220ENST00000627328 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 ELOA3DA6NLF2 546 aaPredicted RBP6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 SCTRP47872 440 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 MAP7D1Q3KQU3 841 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 ELOA3BQ3SY89 546 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 ZNF468Q5VIY5 522 aaPredicted RBP6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 TMEM214Q6NUQ4 689 aaKnown RBP6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 ELOA3Q8NG57 546 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 CNKSR1Q969H4 720 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 TP53INP1Q96A56 240 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 ZCCHC2Q9C0B9 1178 aaKnown RBP6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
PTP4A2-220ENST00000627328 RAD21O60216 631 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 TAL1P17542 331 aaPredicted RBP6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 NRG1Q02297 640 aaPredicted RBP6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 MBTPS1Q14703 1052 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 GRIK4Q16099 956 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 C4orf17Q53FE4 359 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 NLRP8Q86W28 1048 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 CCDC85AQ96PX6 553 aaPredicted RBP6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 PRR12Q9ULL5 1215 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 COG6Q9Y2V7 657 aa6.96□□□□□ -1.3
PTP4A2-220ENST00000627328 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
PTP4A2-220ENST00000627328 PCBP4P57723 403 aaKnown RBP6.95□□□□□ -1.3
PTP4A2-220ENST00000627328 DOLKQ9UPQ8 538 aa6.95□□□□□ -1.3
PTP4A2-220ENST00000627328 ESCO1Q5FWF5 840 aa6.94□□□□□ -1.3
PTP4A2-220ENST00000627328 KRTAP4-11Q9BYQ6 195 aa6.94□□□□□ -1.3
PTP4A2-220ENST00000627328 LZTS3O60299 673 aaPredicted RBP6.93□□□□□ -1.3
PTP4A2-220ENST00000627328 MAPTP10636 758 aaKnown RBP6.93□□□□□ -1.3
PTP4A2-220ENST00000627328 RAB6BQ9NRW1 208 aa6.93□□□□□ -1.3
PTP4A2-220ENST00000627328 DNAAF2Q9NVR5 837 aaKnown RBP6.93□□□□□ -1.3
PTP4A2-220ENST00000627328 IL2RAP01589 272 aa6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 CD33P20138 364 aa6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 TNP2Q05952 138 aa6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 NFATC2IPQ8NCF5 419 aa6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 CDCA7Q9BWT1 371 aaPredicted RBP6.92□□□□□ -1.3
PTP4A2-220ENST00000627328 M0R082 166 aa6.91□□□□□ -1.3
PTP4A2-220ENST00000627328 ZNF417Q8TAU3 575 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms