RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 ANO6Q4KMQ2 910 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 WAPLQ7Z5K2 1190 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 DNM1Q05193 864 aaKnown RBP20.74■□□□□ 0.91
FARP1-242ENST00000627049 SKIDA1Q1XH10 827 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 CEP85Q6P2H3 762 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 ABTB2Q8N961 1025 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 ATP10BO94823 1461 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 FAM177BA6PVY3 158 aa20.74■□□□□ 0.91
FARP1-242ENST00000627049 GTF2F1P35269 517 aaKnown RBP eCLIP20.74■□□□□ 0.911e-6■■■■□ 23.7
FARP1-242ENST00000627049 KDM5CP41229 1560 aa20.73■□□□□ 0.91
FARP1-242ENST00000627049 XBP1P17861 261 aa20.73■□□□□ 0.91
FARP1-242ENST00000627049 RAPGEF4Q8WZA2 1011 aa20.73■□□□□ 0.91
FARP1-242ENST00000627049 BOLA2Q9H3K6 86 aa20.73■□□□□ 0.91
FARP1-242ENST00000627049 DUOX2Q9NRD8 1548 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 MARCH6O60337 910 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 ECHDC1Q9NTX5 307 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 IGSF3O75054 1194 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 SKILP12757 684 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 CCDC102AQ96A19 550 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 DACT1Q9NYF0 836 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 FBLN1P23142 703 aa20.72■□□□□ 0.91
FARP1-242ENST00000627049 NAP1L1P55209 391 aaKnown RBP20.71■□□□□ 0.91
FARP1-242ENST00000627049 TMEM63CQ9P1W3 806 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 PTGS1P23219 599 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
FARP1-242ENST00000627049 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
FARP1-242ENST00000627049 OGFRQ9NZT2 677 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 KDM6BO15054 1643 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 KIF20AO95235 890 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 EVI5LQ96CN4 794 aa20.71■□□□□ 0.91
FARP1-242ENST00000627049 PIP4K2AP48426 406 aaPredicted RBP20.7■□□□□ 0.9
FARP1-242ENST00000627049 TYRO3Q06418 890 aa20.7■□□□□ 0.9
FARP1-242ENST00000627049 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
FARP1-242ENST00000627049 NECAB1Q8N987 351 aa20.7■□□□□ 0.9
FARP1-242ENST00000627049 PPP1R42Q7Z4L9 355 aa20.7■□□□□ 0.9
FARP1-242ENST00000627049 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
FARP1-242ENST00000627049 TMC6Q7Z403 805 aa20.7■□□□□ 0.9
FARP1-242ENST00000627049 BRMS1Q9HCU9 246 aa20.7■□□□□ 0.9
FARP1-242ENST00000627049 TOP1P11387 765 aaKnown RBP20.69■□□□□ 0.9
FARP1-242ENST00000627049 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
FARP1-242ENST00000627049 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
FARP1-242ENST00000627049 RHPN1Q8TCX5 695 aa20.69■□□□□ 0.9
FARP1-242ENST00000627049 CDR1P51861 262 aa20.68■□□□□ 0.9
FARP1-242ENST00000627049 CASQ1P31415 396 aa20.68■□□□□ 0.9
FARP1-242ENST00000627049 RDXP35241 583 aaKnown RBP20.68■□□□□ 0.9
FARP1-242ENST00000627049 CCAR1Q8IX12 1150 aaKnown RBP20.68■□□□□ 0.9
FARP1-242ENST00000627049 GBP3Q9H0R5 595 aa20.68■□□□□ 0.9
FARP1-242ENST00000627049 CTNNA3Q9UI47 895 aa20.68■□□□□ 0.9
FARP1-242ENST00000627049 TRIM35Q9UPQ4 493 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 USP19O94966 1318 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 ARHGAP29Q52LW3 1261 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 DNAAF4Q8WXU2 420 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 DNAJC25Q9H1X3 360 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
FARP1-242ENST00000627049 CHMLP26374 656 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 ATP8B2P98198 1209 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
FARP1-242ENST00000627049 BBXQ8WY36 941 aaPredicted RBP20.67■□□□□ 0.9
FARP1-242ENST00000627049 CCDC8Q9H0W5 538 aaPredicted RBP20.67■□□□□ 0.9
FARP1-242ENST00000627049 DEF6Q9H4E7 631 aa20.67■□□□□ 0.9
FARP1-242ENST00000627049 GUCY1B3Q02153 619 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 CCDC158Q5M9N0 1113 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 CCDC150Q8NCX0 1101 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 ZNF397Q8NF99 534 aaPredicted RBP20.66■□□□□ 0.9
FARP1-242ENST00000627049 SLU7O95391 586 aaKnown RBP20.66■□□□□ 0.9
FARP1-242ENST00000627049 HMGB1P09429 215 aaKnown RBP20.66■□□□□ 0.9
FARP1-242ENST00000627049 SYCP2Q9BX26 1530 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 CDKL5O76039 1030 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 SYT1P21579 422 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 AK2P54819 239 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 IDI1Q13907 227 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 ZSCAN16Q9H4T2 348 aaPredicted RBP20.66■□□□□ 0.9
FARP1-242ENST00000627049 RIOK3O14730 519 aaKnown RBP20.66■□□□□ 0.9
FARP1-242ENST00000627049 CLSTN1O94985 981 aa20.66■□□□□ 0.9
FARP1-242ENST00000627049 U3KPZ7 1027 aaPredicted RBP20.65■□□□□ 0.9
FARP1-242ENST00000627049 SAMD9Q5K651 1589 aa20.65■□□□□ 0.9
FARP1-242ENST00000627049 C17orf53Q8N3J3 647 aaPredicted RBP20.65■□□□□ 0.9
FARP1-242ENST00000627049 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
FARP1-242ENST00000627049 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.65■□□□□ 0.94e-7■□□□□ 9.5
FARP1-242ENST00000627049 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
FARP1-242ENST00000627049 V9GYY5 206 aaPredicted RBP20.65■□□□□ 0.9
FARP1-242ENST00000627049 EPB41L2O43491 1005 aaKnown RBP20.65■□□□□ 0.9
FARP1-242ENST00000627049 POLKQ9UBT6 870 aa20.64■□□□□ 0.9
FARP1-242ENST00000627049 JAKMIP3Q5VZ66 844 aa20.64■□□□□ 0.89
FARP1-242ENST00000627049 TRIM22Q8IYM9 498 aa20.64■□□□□ 0.89
FARP1-242ENST00000627049 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
FARP1-242ENST00000627049 CEP89Q96ST8 783 aa20.64■□□□□ 0.89
FARP1-242ENST00000627049 ZNHIT6Q9NWK9 470 aaKnown RBP20.64■□□□□ 0.89
FARP1-242ENST00000627049 C8orf76Q96K31 380 aa20.64■□□□□ 0.89
FARP1-242ENST00000627049 NPHP3Q7Z494 1330 aa20.64■□□□□ 0.89
FARP1-242ENST00000627049 RAPGEF3O95398 923 aa20.63■□□□□ 0.89
FARP1-242ENST00000627049 TTC39AQ5SRH9 613 aa20.63■□□□□ 0.89
FARP1-242ENST00000627049 KIAA0556O60303 1618 aa20.63■□□□□ 0.89
FARP1-242ENST00000627049 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
FARP1-242ENST00000627049 BIN1O00499 593 aa20.63■□□□□ 0.89
FARP1-242ENST00000627049 LUZP1Q86V48 1076 aa20.63■□□□□ 0.89
FARP1-242ENST00000627049 KIAA0754O94854 1291 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms