RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 COL15A1P39059 1388 aa18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 KCNQ3O43525 872 aa18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 PRKAR2BP31323 418 aa18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
SOX2-OT-241ENST00000626948 ARFGEF1Q9Y6D6 1849 aa18.22■□□□□ 0.51
SOX2-OT-241ENST00000626948 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
SOX2-OT-241ENST00000626948 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
SOX2-OT-241ENST00000626948 ZNF526Q8TF50 670 aaPredicted RBP18.21■□□□□ 0.51
SOX2-OT-241ENST00000626948 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
SOX2-OT-241ENST00000626948 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
SOX2-OT-241ENST00000626948 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
SOX2-OT-241ENST00000626948 CHRNA5P30532 468 aa18.2■□□□□ 0.5
SOX2-OT-241ENST00000626948 EIF5P55010 431 aaKnown RBP18.2■□□□□ 0.5
SOX2-OT-241ENST00000626948 NFIXQ14938 502 aa18.2■□□□□ 0.5
SOX2-OT-241ENST00000626948 CANXP27824 592 aaKnown RBP18.19■□□□□ 0.5
SOX2-OT-241ENST00000626948 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
SOX2-OT-241ENST00000626948 ZPR1O75312 459 aa18.17■□□□□ 0.5
SOX2-OT-241ENST00000626948 FCHSD2O94868 740 aa18.17■□□□□ 0.5
SOX2-OT-241ENST00000626948 TEFQ10587 303 aa18.17■□□□□ 0.5
SOX2-OT-241ENST00000626948 GPBP1L1Q9HC44 474 aaPredicted RBP18.17■□□□□ 0.5
SOX2-OT-241ENST00000626948 SCN7AQ01118 1682 aa18.16■□□□□ 0.5
SOX2-OT-241ENST00000626948 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
SOX2-OT-241ENST00000626948 KIF3CO14782 793 aa18.16■□□□□ 0.5
SOX2-OT-241ENST00000626948 DLEC1Q9Y238 1755 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 A1BGP04217 495 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 ARHGAP27Q6ZUM4 889 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 MCM10Q7L590 875 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 PIM2Q9P1W9 311 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 ANKRD31Q8N7Z5 1873 aa18.15■□□□□ 0.5
SOX2-OT-241ENST00000626948 SBF1O95248 1867 aa18.14■□□□□ 0.49
SOX2-OT-241ENST00000626948 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
SOX2-OT-241ENST00000626948 SERPINB2P05120 415 aa18.13■□□□□ 0.49
SOX2-OT-241ENST00000626948 PIP4K2AP48426 406 aaPredicted RBP18.13■□□□□ 0.49
SOX2-OT-241ENST00000626948 TBC1D9BQ66K14 1250 aa18.13■□□□□ 0.49
SOX2-OT-241ENST00000626948 DLG5Q8TDM6 1919 aa18.13■□□□□ 0.49
SOX2-OT-241ENST00000626948 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
SOX2-OT-241ENST00000626948 STARD3NLO95772 234 aa18.12■□□□□ 0.49
SOX2-OT-241ENST00000626948 PRELPP51888 382 aa18.12■□□□□ 0.49
SOX2-OT-241ENST00000626948 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
SOX2-OT-241ENST00000626948 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
SOX2-OT-241ENST00000626948 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
SOX2-OT-241ENST00000626948 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
SOX2-OT-241ENST00000626948 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
SOX2-OT-241ENST00000626948 NUDCQ9Y266 331 aa18.11■□□□□ 0.49
SOX2-OT-241ENST00000626948 COL11A2P13942 1736 aaPredicted RBP18.1■□□□□ 0.49
SOX2-OT-241ENST00000626948 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
SOX2-OT-241ENST00000626948 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
SOX2-OT-241ENST00000626948 CAMTA2O94983 1202 aa18.09■□□□□ 0.49
SOX2-OT-241ENST00000626948 C9orf131Q5VYM1 1079 aa18.09■□□□□ 0.49
SOX2-OT-241ENST00000626948 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
SOX2-OT-241ENST00000626948 TEX13AQ9BXU3 409 aaPredicted RBP18.08■□□□□ 0.48
SOX2-OT-241ENST00000626948 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
SOX2-OT-241ENST00000626948 ZNF330Q9Y3S2 320 aaPredicted RBP18.08■□□□□ 0.48
SOX2-OT-241ENST00000626948 NBPF26B4DH59 902 aa18.07■□□□□ 0.48
SOX2-OT-241ENST00000626948 RASSF7Q02833 373 aa18.07■□□□□ 0.48
SOX2-OT-241ENST00000626948 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
SOX2-OT-241ENST00000626948 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
SOX2-OT-241ENST00000626948 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
SOX2-OT-241ENST00000626948 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
SOX2-OT-241ENST00000626948 A0A087WZG4 1122 aa18.06■□□□□ 0.48
SOX2-OT-241ENST00000626948 KDM3BQ7LBC6 1761 aa18.06■□□□□ 0.48
SOX2-OT-241ENST00000626948 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
SOX2-OT-241ENST00000626948 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
SOX2-OT-241ENST00000626948 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
SOX2-OT-241ENST00000626948 HSPA6P17066 643 aa18.03■□□□□ 0.48
SOX2-OT-241ENST00000626948 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
SOX2-OT-241ENST00000626948 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
SOX2-OT-241ENST00000626948 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
SOX2-OT-241ENST00000626948 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
SOX2-OT-241ENST00000626948 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.48
SOX2-OT-241ENST00000626948 NFKBIEO00221 500 aa18.02■□□□□ 0.48
SOX2-OT-241ENST00000626948 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
SOX2-OT-241ENST00000626948 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
SOX2-OT-241ENST00000626948 SLX4Q8IY92 1834 aa18.01■□□□□ 0.47
SOX2-OT-241ENST00000626948 TTLL6Q8N841 843 aa18.01■□□□□ 0.47
SOX2-OT-241ENST00000626948 BRIP1Q9BX63 1249 aa18■□□□□ 0.47
SOX2-OT-241ENST00000626948 CACNA1SQ13698 1873 aa18■□□□□ 0.47
SOX2-OT-241ENST00000626948 FER1L6Q2WGJ9 1857 aa18■□□□□ 0.47
SOX2-OT-241ENST00000626948 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
SOX2-OT-241ENST00000626948 H0YIN7 160 aa17.99■□□□□ 0.47
SOX2-OT-241ENST00000626948 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
SOX2-OT-241ENST00000626948 HLFQ16534 295 aa17.99■□□□□ 0.47
SOX2-OT-241ENST00000626948 TOMM70O94826 608 aa17.98■□□□□ 0.47
SOX2-OT-241ENST00000626948 SETDB2Q96T68 719 aa17.98■□□□□ 0.47
SOX2-OT-241ENST00000626948 ARFGEF2Q9Y6D5 1785 aa17.97■□□□□ 0.47
SOX2-OT-241ENST00000626948 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
SOX2-OT-241ENST00000626948 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
SOX2-OT-241ENST00000626948 SRGNP10124 158 aa17.96■□□□□ 0.47
SOX2-OT-241ENST00000626948 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
SOX2-OT-241ENST00000626948 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
SOX2-OT-241ENST00000626948 ZNF622Q969S3 477 aaKnown RBP eCLIP17.96■□□□□ 0.47
SOX2-OT-241ENST00000626948 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms