RNA–Protein interactions for RNA: ENST00000626802.2

SOX2-OT-240, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 737 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-240ENST00000626802 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-240ENST00000626802 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-240ENST00000626802 TGFB2P61812 414 aa16.41■□□□□ 0.22
SOX2-OT-240ENST00000626802 SOS1Q07889 1333 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-240ENST00000626802 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
SOX2-OT-240ENST00000626802 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
SOX2-OT-240ENST00000626802 COL15A1P39059 1388 aa16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 FCHSD2O94868 740 aa16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 KCNA3P22001 575 aa16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SOX2-OT-240ENST00000626802 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
SOX2-OT-240ENST00000626802 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
SOX2-OT-240ENST00000626802 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-240ENST00000626802 KIF3CO14782 793 aa16.36■□□□□ 0.21
SOX2-OT-240ENST00000626802 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-240ENST00000626802 CHRNA5P30532 468 aa16.36■□□□□ 0.21
SOX2-OT-240ENST00000626802 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
SOX2-OT-240ENST00000626802 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
SOX2-OT-240ENST00000626802 TM4SF1P30408 202 aa16.34■□□□□ 0.21
SOX2-OT-240ENST00000626802 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
SOX2-OT-240ENST00000626802 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
SOX2-OT-240ENST00000626802 ZPR1O75312 459 aa16.33■□□□□ 0.2
SOX2-OT-240ENST00000626802 SLX4Q8IY92 1834 aa16.33■□□□□ 0.2
SOX2-OT-240ENST00000626802 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
SOX2-OT-240ENST00000626802 NUP98P52948 1817 aa16.32■□□□□ 0.2
SOX2-OT-240ENST00000626802 NFIXQ14938 502 aa16.32■□□□□ 0.2
SOX2-OT-240ENST00000626802 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
SOX2-OT-240ENST00000626802 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
SOX2-OT-240ENST00000626802 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
SOX2-OT-240ENST00000626802 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
SOX2-OT-240ENST00000626802 HSPA6P17066 643 aa16.31■□□□□ 0.2
SOX2-OT-240ENST00000626802 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
SOX2-OT-240ENST00000626802 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
SOX2-OT-240ENST00000626802 C9orf131Q5VYM1 1079 aa16.3■□□□□ 0.2
SOX2-OT-240ENST00000626802 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
SOX2-OT-240ENST00000626802 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
SOX2-OT-240ENST00000626802 ZNF496Q96IT1 587 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-240ENST00000626802 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
SOX2-OT-240ENST00000626802 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
SOX2-OT-240ENST00000626802 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
SOX2-OT-240ENST00000626802 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
SOX2-OT-240ENST00000626802 KCNQ3O43525 872 aa16.28■□□□□ 0.2
SOX2-OT-240ENST00000626802 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
SOX2-OT-240ENST00000626802 RASSF7Q02833 373 aa16.28■□□□□ 0.2
SOX2-OT-240ENST00000626802 TEFQ10587 303 aa16.28■□□□□ 0.2
SOX2-OT-240ENST00000626802 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
SOX2-OT-240ENST00000626802 SERPINB2P05120 415 aa16.27■□□□□ 0.2
SOX2-OT-240ENST00000626802 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
SOX2-OT-240ENST00000626802 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
SOX2-OT-240ENST00000626802 RNF181Q9P0P0 153 aa16.27■□□□□ 0.2
SOX2-OT-240ENST00000626802 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-240ENST00000626802 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
SOX2-OT-240ENST00000626802 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
SOX2-OT-240ENST00000626802 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
SOX2-OT-240ENST00000626802 STARD3NLO95772 234 aa16.24■□□□□ 0.19
SOX2-OT-240ENST00000626802 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
SOX2-OT-240ENST00000626802 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-240ENST00000626802 PRELPP51888 382 aa16.24■□□□□ 0.19
SOX2-OT-240ENST00000626802 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
SOX2-OT-240ENST00000626802 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
SOX2-OT-240ENST00000626802 A1BGP04217 495 aa16.23■□□□□ 0.19
SOX2-OT-240ENST00000626802 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
SOX2-OT-240ENST00000626802 BTBD11A6QL63 1104 aa16.22■□□□□ 0.19
SOX2-OT-240ENST00000626802 TOMM70O94826 608 aa16.22■□□□□ 0.19
SOX2-OT-240ENST00000626802 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
SOX2-OT-240ENST00000626802 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
SOX2-OT-240ENST00000626802 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-240ENST00000626802 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
SOX2-OT-240ENST00000626802 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
SOX2-OT-240ENST00000626802 MCM10Q7L590 875 aa16.21■□□□□ 0.19
SOX2-OT-240ENST00000626802 A0A087WZG4 1122 aa16.2■□□□□ 0.18
SOX2-OT-240ENST00000626802 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-240ENST00000626802 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
SOX2-OT-240ENST00000626802 ANKRD36CQ5JPF3 1778 aa16.2■□□□□ 0.18
SOX2-OT-240ENST00000626802 LAMB2P55268 1798 aa16.19■□□□□ 0.18
SOX2-OT-240ENST00000626802 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
SOX2-OT-240ENST00000626802 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
SOX2-OT-240ENST00000626802 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
SOX2-OT-240ENST00000626802 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
SOX2-OT-240ENST00000626802 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
SOX2-OT-240ENST00000626802 H0YIN7 160 aa16.18■□□□□ 0.18
SOX2-OT-240ENST00000626802 NFKBIEO00221 500 aa16.18■□□□□ 0.18
SOX2-OT-240ENST00000626802 HTRA3P83110 453 aa16.18■□□□□ 0.18
SOX2-OT-240ENST00000626802 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-240ENST00000626802 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-240ENST00000626802 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
SOX2-OT-240ENST00000626802 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
SOX2-OT-240ENST00000626802 LMNB1P20700 586 aa16.16■□□□□ 0.18
SOX2-OT-240ENST00000626802 APLP1P51693 650 aa16.16■□□□□ 0.18
SOX2-OT-240ENST00000626802 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-240ENST00000626802 RBM46Q8TBY0 533 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-240ENST00000626802 ZNF622Q969S3 477 aaKnown RBP eCLIP16.16■□□□□ 0.18
SOX2-OT-240ENST00000626802 SCN4AP35499 1836 aa16.16■□□□□ 0.18
SOX2-OT-240ENST00000626802 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-240ENST00000626802 C21orf2O43822 256 aa16.14■□□□□ 0.17
SOX2-OT-240ENST00000626802 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
SOX2-OT-240ENST00000626802 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms