RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
SOX2-OT-239ENST00000626619 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
SOX2-OT-239ENST00000626619 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
SOX2-OT-239ENST00000626619 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
SOX2-OT-239ENST00000626619 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-239ENST00000626619 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
SOX2-OT-239ENST00000626619 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
SOX2-OT-239ENST00000626619 RALBP1Q15311 655 aa18.31■□□□□ 0.52
SOX2-OT-239ENST00000626619 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
SOX2-OT-239ENST00000626619 A1BGP04217 495 aa18.3■□□□□ 0.52
SOX2-OT-239ENST00000626619 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
SOX2-OT-239ENST00000626619 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
SOX2-OT-239ENST00000626619 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
SOX2-OT-239ENST00000626619 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
SOX2-OT-239ENST00000626619 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
SOX2-OT-239ENST00000626619 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-239ENST00000626619 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-239ENST00000626619 EIF5P55010 431 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-239ENST00000626619 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
SOX2-OT-239ENST00000626619 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
SOX2-OT-239ENST00000626619 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
SOX2-OT-239ENST00000626619 KIAA1551Q9HCM1 1747 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 ZPR1O75312 459 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 DPEP1P16444 411 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 NFIXQ14938 502 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
SOX2-OT-239ENST00000626619 STARD3NLO95772 234 aa18.26■□□□□ 0.51
SOX2-OT-239ENST00000626619 RRP7AQ9Y3A4 280 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-239ENST00000626619 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
SOX2-OT-239ENST00000626619 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
SOX2-OT-239ENST00000626619 KCNA3P22001 575 aa18.24■□□□□ 0.51
SOX2-OT-239ENST00000626619 CHRNA5P30532 468 aa18.24■□□□□ 0.51
SOX2-OT-239ENST00000626619 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
SOX2-OT-239ENST00000626619 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
SOX2-OT-239ENST00000626619 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
SOX2-OT-239ENST00000626619 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
SOX2-OT-239ENST00000626619 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
SOX2-OT-239ENST00000626619 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
SOX2-OT-239ENST00000626619 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
SOX2-OT-239ENST00000626619 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
SOX2-OT-239ENST00000626619 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
SOX2-OT-239ENST00000626619 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
SOX2-OT-239ENST00000626619 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
SOX2-OT-239ENST00000626619 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
SOX2-OT-239ENST00000626619 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
SOX2-OT-239ENST00000626619 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 NEFMP07197 916 aa18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 RIPK4P57078 832 aa18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 TGFB2P61812 414 aa18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 KIF13BQ9NQT8 1826 aa18.2■□□□□ 0.5
SOX2-OT-239ENST00000626619 SERPINB2P05120 415 aa18.19■□□□□ 0.5
SOX2-OT-239ENST00000626619 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
SOX2-OT-239ENST00000626619 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
SOX2-OT-239ENST00000626619 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
SOX2-OT-239ENST00000626619 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
SOX2-OT-239ENST00000626619 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
SOX2-OT-239ENST00000626619 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
SOX2-OT-239ENST00000626619 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
SOX2-OT-239ENST00000626619 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
SOX2-OT-239ENST00000626619 A0A087WZG4 1122 aa18.17■□□□□ 0.5
SOX2-OT-239ENST00000626619 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
SOX2-OT-239ENST00000626619 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
SOX2-OT-239ENST00000626619 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
SOX2-OT-239ENST00000626619 ADCY9O60503 1353 aa18.16■□□□□ 0.5
SOX2-OT-239ENST00000626619 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
SOX2-OT-239ENST00000626619 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
SOX2-OT-239ENST00000626619 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
SOX2-OT-239ENST00000626619 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.5
SOX2-OT-239ENST00000626619 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
SOX2-OT-239ENST00000626619 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
SOX2-OT-239ENST00000626619 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
SOX2-OT-239ENST00000626619 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
SOX2-OT-239ENST00000626619 PIM2Q9P1W9 311 aa18.13■□□□□ 0.49
SOX2-OT-239ENST00000626619 CHD4Q14839 1912 aa18.13■□□□□ 0.49
SOX2-OT-239ENST00000626619 HLFQ16534 295 aa18.12■□□□□ 0.49
SOX2-OT-239ENST00000626619 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
SOX2-OT-239ENST00000626619 MYL6BP14649 208 aa18.11■□□□□ 0.49
SOX2-OT-239ENST00000626619 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
SOX2-OT-239ENST00000626619 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
SOX2-OT-239ENST00000626619 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
SOX2-OT-239ENST00000626619 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
SOX2-OT-239ENST00000626619 ANXA1P04083 346 aa18.1■□□□□ 0.49
SOX2-OT-239ENST00000626619 PROSER3Q2NL68 480 aa18.1■□□□□ 0.49
SOX2-OT-239ENST00000626619 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
SOX2-OT-239ENST00000626619 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
SOX2-OT-239ENST00000626619 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
SOX2-OT-239ENST00000626619 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
SOX2-OT-239ENST00000626619 RASSF7Q02833 373 aa18.09■□□□□ 0.49
SOX2-OT-239ENST00000626619 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
SOX2-OT-239ENST00000626619 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms