RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PNISRQ8TF01 805 aaKnown RBP29.53■■■□□ 2.32
SF1-220ENST00000626028 WDR43Q15061 677 aaKnown RBP eCLIP29.52■■■□□ 2.32
SF1-220ENST00000626028 COL15A1P39059 1388 aa29.52■■■□□ 2.32
SF1-220ENST00000626028 DCTN1Q14203 1278 aa29.51■■■□□ 2.31
SF1-220ENST00000626028 ZBTB1Q9Y2K1 713 aa29.5■■■□□ 2.31
SF1-220ENST00000626028 LAMB4A4D0S4 1761 aa29.49■■■□□ 2.31
SF1-220ENST00000626028 ZPR1O75312 459 aa29.49■■■□□ 2.31
SF1-220ENST00000626028 LMOD3Q0VAK6 560 aa29.49■■■□□ 2.31
SF1-220ENST00000626028 NLGN2Q8NFZ4 835 aa29.49■■■□□ 2.31
SF1-220ENST00000626028 A0A087WZG4 1122 aa29.48■■■□□ 2.31
SF1-220ENST00000626028 NARFQ9UHQ1 456 aa29.48■■■□□ 2.31
SF1-220ENST00000626028 GOLGB1Q14789 3259 aaKnown RBP29.47■■■□□ 2.31
SF1-220ENST00000626028 SNRPA1P09661 255 aaKnown RBP29.47■■■□□ 2.31
SF1-220ENST00000626028 UTRNP46939 3433 aa29.46■■■□□ 2.31
SF1-220ENST00000626028 KCNQ3O43525 872 aa29.46■■■□□ 2.31
SF1-220ENST00000626028 EIF5P55010 431 aaKnown RBP29.46■■■□□ 2.31
SF1-220ENST00000626028 RUNDC1Q96C34 613 aa29.46■■■□□ 2.31
SF1-220ENST00000626028 PARP3Q9Y6F1 533 aa29.46■■■□□ 2.31
SF1-220ENST00000626028 IL6STP40189 918 aaPredicted RBP29.45■■■□□ 2.31
SF1-220ENST00000626028 TMPOP42166 694 aaKnown RBP29.45■■■□□ 2.31
SF1-220ENST00000626028 GPR162Q16538 588 aa29.45■■■□□ 2.31
SF1-220ENST00000626028 RIPK4P57078 832 aa29.44■■■□□ 2.3
SF1-220ENST00000626028 SRP68Q9UHB9 627 aaKnown RBP29.44■■■□□ 2.3
SF1-220ENST00000626028 SCN7AQ01118 1682 aa29.44■■■□□ 2.3
SF1-220ENST00000626028 CANXP27824 592 aaKnown RBP29.43■■■□□ 2.3
SF1-220ENST00000626028 BABAM1Q9NWV8 329 aa29.43■■■□□ 2.3
SF1-220ENST00000626028 C10orf71Q711Q0 1435 aa29.43■■■□□ 2.3
SF1-220ENST00000626028 KIAA1551Q9HCM1 1747 aa29.42■■■□□ 2.3
SF1-220ENST00000626028 FKBP8Q14318 412 aa29.42■■■□□ 2.3
SF1-220ENST00000626028 ADAMTS8Q9UP79 889 aa29.42■■■□□ 2.3
SF1-220ENST00000626028 AFDNP55196 1824 aaKnown RBP29.42■■■□□ 2.3
SF1-220ENST00000626028 TGFB2P61812 414 aa29.41■■■□□ 2.3
SF1-220ENST00000626028 USPL1Q5W0Q7 1092 aa29.41■■■□□ 2.3
SF1-220ENST00000626028 NRXN2Q9P2S2 1712 aa29.41■■■□□ 2.3
SF1-220ENST00000626028 BRCA1P38398 1863 aaKnown RBP29.4■■■□□ 2.3
SF1-220ENST00000626028 BCORQ6W2J9 1755 aa29.4■■■□□ 2.3
SF1-220ENST00000626028 GRIN3BO60391 1043 aa29.4■■■□□ 2.3
SF1-220ENST00000626028 TM4SF1P30408 202 aa29.4■■■□□ 2.3
SF1-220ENST00000626028 NPM2Q86SE8 214 aaKnown RBP29.4■■■□□ 2.3
SF1-220ENST00000626028 USP16Q9Y5T5 823 aa29.39■■■□□ 2.3
SF1-220ENST00000626028 N4BP2Q86UW6 1770 aaPredicted RBP29.39■■■□□ 2.29
SF1-220ENST00000626028 YY1P25490 414 aa29.38■■■□□ 2.29
SF1-220ENST00000626028 A1BGP04217 495 aa29.36■■■□□ 2.29
SF1-220ENST00000626028 POLRMTO00411 1230 aaKnown RBP29.35■■■□□ 2.29
SF1-220ENST00000626028 THUMPD2Q9BTF0 503 aaKnown RBP29.35■■■□□ 2.29
SF1-220ENST00000626028 MIS18AQ9NYP9 233 aa29.35■■■□□ 2.29
SF1-220ENST00000626028 PXDNLA1KZ92 1463 aa29.35■■■□□ 2.29
SF1-220ENST00000626028 RGL2O15211 777 aa29.34■■■□□ 2.29
SF1-220ENST00000626028 EIF4A1P60842 406 aaKnown RBP29.34■■■□□ 2.29
SF1-220ENST00000626028 DDR1Q08345 913 aa29.34■■■□□ 2.29
SF1-220ENST00000626028 CCDC146Q8IYE0 955 aa29.34■■■□□ 2.29
SF1-220ENST00000626028 GIGYF1O75420 1035 aaPredicted RBP29.33■■■□□ 2.29
SF1-220ENST00000626028 PELP1Q8IZL8 1130 aaKnown RBP29.33■■■□□ 2.29
SF1-220ENST00000626028 BCL2L12Q9HB09 334 aa29.33■■■□□ 2.29
SF1-220ENST00000626028 YBX3P16989 372 aaKnown RBP eCLIP29.32■■■□□ 2.283e-8■■□□□ 11.9
SF1-220ENST00000626028 NFIXQ14938 502 aa29.32■■■□□ 2.28
SF1-220ENST00000626028 PRAMEF22A3QJZ6 481 aa29.31■■■□□ 2.28
SF1-220ENST00000626028 ANP32CO43423 234 aa29.31■■■□□ 2.28
SF1-220ENST00000626028 TSPYL4Q9UJ04 414 aa29.31■■■□□ 2.28
SF1-220ENST00000626028 ARFGEF1Q9Y6D6 1849 aa29.31■■■□□ 2.28
SF1-220ENST00000626028 ZNF330Q9Y3S2 320 aaPredicted RBP29.3■■■□□ 2.28
SF1-220ENST00000626028 CLEC4GQ6UXB4 293 aa29.29■■■□□ 2.28
SF1-220ENST00000626028 TRIM35Q9UPQ4 493 aa29.29■■■□□ 2.28
SF1-220ENST00000626028 TBC1D2BQ9UPU7 963 aa29.29■■■□□ 2.28
SF1-220ENST00000626028 DZIP3Q86Y13 1208 aaKnown RBP29.28■■■□□ 2.28
SF1-220ENST00000626028 RRP7AQ9Y3A4 280 aaKnown RBP29.28■■■□□ 2.28
SF1-220ENST00000626028 DLEC1Q9Y238 1755 aa29.28■■■□□ 2.28
SF1-220ENST00000626028 ERBB4Q15303 1308 aa29.27■■■□□ 2.28
SF1-220ENST00000626028 CAMTA2O94983 1202 aa29.27■■■□□ 2.28
SF1-220ENST00000626028 NEUROD2Q15784 382 aa29.27■■■□□ 2.28
SF1-220ENST00000626028 NBPF26B4DH59 902 aa29.26■■■□□ 2.27
SF1-220ENST00000626028 NBPF10Q6P3W6 841 aaKnown RBP29.26■■■□□ 2.27
SF1-220ENST00000626028 NBPF15Q8N660 670 aa29.26■■■□□ 2.27
SF1-220ENST00000626028 SERPINB2P05120 415 aa29.25■■■□□ 2.27
SF1-220ENST00000626028 ZNF652Q9Y2D9 606 aa29.25■■■□□ 2.27
SF1-220ENST00000626028 CARMIL3Q8ND23 1372 aa29.25■■■□□ 2.27
SF1-220ENST00000626028 NUP98P52948 1817 aa29.24■■■□□ 2.27
SF1-220ENST00000626028 CHL1O00533 1208 aa29.24■■■□□ 2.27
SF1-220ENST00000626028 A0A0G2JLW4 131 aa29.23■■■□□ 2.27
SF1-220ENST00000626028 CALD1Q05682 793 aaKnown RBP29.22■■■□□ 2.27
SF1-220ENST00000626028 TBC1D9BQ66K14 1250 aa29.22■■■□□ 2.27
SF1-220ENST00000626028 DPEP1P16444 411 aa29.21■■■□□ 2.27
SF1-220ENST00000626028 SETDB2Q96T68 719 aa29.21■■■□□ 2.27
SF1-220ENST00000626028 ANKRD31Q8N7Z5 1873 aa29.21■■■□□ 2.27
SF1-220ENST00000626028 KCNA3P22001 575 aa29.2■■■□□ 2.26
SF1-220ENST00000626028 PIM2Q9P1W9 311 aa29.2■■■□□ 2.26
SF1-220ENST00000626028 PDZRN3Q9UPQ7 1066 aa29.2■■■□□ 2.26
SF1-220ENST00000626028 APAF1O14727 1248 aa29.19■■■□□ 2.26
SF1-220ENST00000626028 PIP4K2AP48426 406 aaPredicted RBP29.19■■■□□ 2.26
SF1-220ENST00000626028 CFAP44Q96MT7 982 aa29.19■■■□□ 2.26
SF1-220ENST00000626028 ERVV-1B6SEH8 477 aa29.17■■■□□ 2.26
SF1-220ENST00000626028 NCBP3Q53F19 620 aaKnown RBP29.17■■■□□ 2.26
SF1-220ENST00000626028 BICDL1Q6ZP65 573 aa29.17■■■□□ 2.26
SF1-220ENST00000626028 CCDC184Q52MB2 194 aa29.16■■■□□ 2.26
SF1-220ENST00000626028 MRS2Q9HD23 443 aa29.16■■■□□ 2.26
SF1-220ENST00000626028 HOXB7P09629 217 aa29.15■■■□□ 2.26
SF1-220ENST00000626028 BRIP1Q9BX63 1249 aa29.15■■■□□ 2.26
SF1-220ENST00000626028 BCS1LQ9Y276 419 aa29.15■■■□□ 2.26
SF1-220ENST00000626028 PDE6BP35913 854 aa29.13■■■□□ 2.25
SF1-220ENST00000626028 DALRD3Q5D0E6 543 aaKnown RBP29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms