RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 UBR3Q6ZT12 1888 aa14.4□□□□□ -0.1
SSBP4-215ENST00000625926 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-215ENST00000625926 WWC3Q9ULE0 1092 aa14.39□□□□□ -0.11
SSBP4-215ENST00000625926 A0A087WZG4 1122 aa14.38□□□□□ -0.11
SSBP4-215ENST00000625926 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
SSBP4-215ENST00000625926 KCNQ3O43525 872 aa14.38□□□□□ -0.11
SSBP4-215ENST00000625926 TM4SF1P30408 202 aa14.38□□□□□ -0.11
SSBP4-215ENST00000625926 EIF5P55010 431 aaKnown RBP14.38□□□□□ -0.11
SSBP4-215ENST00000625926 DDR1Q08345 913 aa14.38□□□□□ -0.11
SSBP4-215ENST00000625926 DCTN1Q14203 1278 aa14.38□□□□□ -0.11
SSBP4-215ENST00000625926 COL15A1P39059 1388 aa14.37□□□□□ -0.11
SSBP4-215ENST00000625926 ADAMTS7Q9UKP4 1686 aa14.37□□□□□ -0.11
SSBP4-215ENST00000625926 TAF7Q15545 349 aaPredicted RBP14.37□□□□□ -0.11
SSBP4-215ENST00000625926 PLEKHF1Q96S99 279 aa14.37□□□□□ -0.11
SSBP4-215ENST00000625926 C10orf71Q711Q0 1435 aa14.36□□□□□ -0.11
SSBP4-215ENST00000625926 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
SSBP4-215ENST00000625926 DPEP1P16444 411 aa14.36□□□□□ -0.11
SSBP4-215ENST00000625926 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
SSBP4-215ENST00000625926 NPM2Q86SE8 214 aaKnown RBP14.36□□□□□ -0.11
SSBP4-215ENST00000625926 SCN11AQ9UI33 1791 aa14.36□□□□□ -0.11
SSBP4-215ENST00000625926 SNRPA1P09661 255 aaKnown RBP14.35□□□□□ -0.11
SSBP4-215ENST00000625926 NFIXQ14938 502 aa14.35□□□□□ -0.11
SSBP4-215ENST00000625926 NFE2L2Q16236 605 aa14.35□□□□□ -0.11
SSBP4-215ENST00000625926 BCL2L12Q9HB09 334 aa14.35□□□□□ -0.11
SSBP4-215ENST00000625926 BCS1LQ9Y276 419 aa14.35□□□□□ -0.11
SSBP4-215ENST00000625926 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-215ENST00000625926 MAPK8IP3Q9UPT6 1336 aa14.35□□□□□ -0.11
SSBP4-215ENST00000625926 CICQ96RK0 1608 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-215ENST00000625926 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
SSBP4-215ENST00000625926 A1BGP04217 495 aa14.34□□□□□ -0.11
SSBP4-215ENST00000625926 USP16Q9Y5T5 823 aa14.34□□□□□ -0.11
SSBP4-215ENST00000625926 COL5A3P25940 1745 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-215ENST00000625926 TJP1Q07157 1748 aa14.33□□□□□ -0.12
SSBP4-215ENST00000625926 SERPINB2P05120 415 aa14.33□□□□□ -0.12
SSBP4-215ENST00000625926 KCNA3P22001 575 aa14.33□□□□□ -0.12
SSBP4-215ENST00000625926 PNISRQ8TF01 805 aaKnown RBP14.33□□□□□ -0.12
SSBP4-215ENST00000625926 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.12
SSBP4-215ENST00000625926 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
SSBP4-215ENST00000625926 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
SSBP4-215ENST00000625926 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
SSBP4-215ENST00000625926 PRAMEF22A3QJZ6 481 aa14.32□□□□□ -0.12
SSBP4-215ENST00000625926 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
SSBP4-215ENST00000625926 CHRNA5P30532 468 aa14.3□□□□□ -0.12
SSBP4-215ENST00000625926 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
SSBP4-215ENST00000625926 DALRD3Q5D0E6 543 aaKnown RBP14.3□□□□□ -0.12
SSBP4-215ENST00000625926 TBC1D9BQ66K14 1250 aa14.3□□□□□ -0.12
SSBP4-215ENST00000625926 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
SSBP4-215ENST00000625926 GOLGB1Q14789 3259 aaKnown RBP14.29□□□□□ -0.12
SSBP4-215ENST00000625926 RIPK4P57078 832 aa14.29□□□□□ -0.12
SSBP4-215ENST00000625926 DZIP3Q86Y13 1208 aaKnown RBP14.29□□□□□ -0.12
SSBP4-215ENST00000625926 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
SSBP4-215ENST00000625926 C4AP0C0L4 1744 aa14.29□□□□□ -0.12
SSBP4-215ENST00000625926 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
SSBP4-215ENST00000625926 CAMTA2O94983 1202 aa14.28□□□□□ -0.12
SSBP4-215ENST00000625926 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
SSBP4-215ENST00000625926 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
SSBP4-215ENST00000625926 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
SSBP4-215ENST00000625926 EIF4A1P60842 406 aaKnown RBP14.27□□□□□ -0.13
SSBP4-215ENST00000625926 WDR43Q15061 677 aaKnown RBP eCLIP14.27□□□□□ -0.13
SSBP4-215ENST00000625926 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
SSBP4-215ENST00000625926 CLEC4GQ6UXB4 293 aa14.27□□□□□ -0.13
SSBP4-215ENST00000625926 NBPF15Q8N660 670 aa14.27□□□□□ -0.13
SSBP4-215ENST00000625926 PRKRIP1Q9H875 184 aaPredicted RBP14.27□□□□□ -0.13
SSBP4-215ENST00000625926 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
SSBP4-215ENST00000625926 H0YIN7 160 aa14.26□□□□□ -0.13
SSBP4-215ENST00000625926 CAPN15O75808 1086 aa14.26□□□□□ -0.13
SSBP4-215ENST00000625926 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
SSBP4-215ENST00000625926 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
SSBP4-215ENST00000625926 GPBP1L1Q9HC44 474 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-215ENST00000625926 CARMIL3Q8ND23 1372 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 UBR2Q8IWV8 1755 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 PDE6BP35913 854 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 CCDC146Q8IYE0 955 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 RUNDC1Q96C34 613 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 ZNF652Q9Y2D9 606 aa14.25□□□□□ -0.13
SSBP4-215ENST00000625926 ADCY9O60503 1353 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 RGL2O15211 777 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 NPHP1O15259 732 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 PRR5LQ6MZQ0 368 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 TTLL6Q8N841 843 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 ZNF526Q8TF50 670 aaPredicted RBP14.24□□□□□ -0.13
SSBP4-215ENST00000625926 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 ADAMTS8Q9UP79 889 aa14.24□□□□□ -0.13
SSBP4-215ENST00000625926 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
SSBP4-215ENST00000625926 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
SSBP4-215ENST00000625926 CNBD1Q8NA66 436 aa14.23□□□□□ -0.13
SSBP4-215ENST00000625926 ST5P78524 1137 aa14.22□□□□□ -0.13
SSBP4-215ENST00000625926 C9orf131Q5VYM1 1079 aa14.22□□□□□ -0.13
SSBP4-215ENST00000625926 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
SSBP4-215ENST00000625926 CCDC24Q8N4L8 307 aa14.22□□□□□ -0.13
SSBP4-215ENST00000625926 NGEFQ8N5V2 710 aa14.22□□□□□ -0.13
SSBP4-215ENST00000625926 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
SSBP4-215ENST00000625926 TPTE2Q6XPS3 522 aa14.21□□□□□ -0.13
SSBP4-215ENST00000625926 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.13
SSBP4-215ENST00000625926 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
SSBP4-215ENST00000625926 SIPA1L3O60292 1781 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms