RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
CHD2-205ENST00000625662 HOXC9P31274 260 aa13.97□□□□□ -0.17
CHD2-205ENST00000625662 SBNO1A3KN83 1393 aa13.97□□□□□ -0.17
CHD2-205ENST00000625662 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.17
CHD2-205ENST00000625662 FAM196AQ6ZSG2 479 aa13.96□□□□□ -0.17
CHD2-205ENST00000625662 WASF1Q92558 559 aa13.96□□□□□ -0.17
CHD2-205ENST00000625662 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.17
CHD2-205ENST00000625662 COL17A1Q9UMD9 1497 aaPredicted RBP13.96□□□□□ -0.17
CHD2-205ENST00000625662 DNAI2Q9GZS0 605 aa13.96□□□□□ -0.17
CHD2-205ENST00000625662 IMMTQ16891 758 aaKnown RBP13.96□□□□□ -0.18
CHD2-205ENST00000625662 NOC3LQ8WTT2 800 aaKnown RBP13.96□□□□□ -0.18
CHD2-205ENST00000625662 HOOK2Q96ED9 719 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
CHD2-205ENST00000625662 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
CHD2-205ENST00000625662 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 DDX11L8A8MPP1 907 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
CHD2-205ENST00000625662 TNNI2P48788 182 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 FLIIQ13045 1269 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
CHD2-205ENST00000625662 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 FEZ1Q99689 392 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
CHD2-205ENST00000625662 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 KDM5CP41229 1560 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 PLEKHG3A1L390 1219 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 GOLGA6L19H0YKK7 550 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 CNBD1Q8NA66 436 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
CHD2-205ENST00000625662 MAP3K2Q9Y2U5 619 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 BECN2A8MW95 431 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 ALDH1L1O75891 902 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 ZNF76P36508 570 aa13.94□□□□□ -0.18
CHD2-205ENST00000625662 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
CHD2-205ENST00000625662 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
CHD2-205ENST00000625662 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
CHD2-205ENST00000625662 EIF6P56537 245 aaKnown RBP13.93□□□□□ -0.18
CHD2-205ENST00000625662 EIF4A2Q14240 407 aaKnown RBP13.93□□□□□ -0.18
CHD2-205ENST00000625662 JMYQ8N9B5 988 aa13.93□□□□□ -0.18
CHD2-205ENST00000625662 SEC63Q9UGP8 760 aaKnown RBP13.93□□□□□ -0.18
CHD2-205ENST00000625662 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
CHD2-205ENST00000625662 CUL5Q93034 780 aa13.93□□□□□ -0.18
CHD2-205ENST00000625662 H0YIN7 160 aa13.93□□□□□ -0.18
CHD2-205ENST00000625662 KRT18P05783 430 aaKnown RBP13.92□□□□□ -0.18
CHD2-205ENST00000625662 LTKP29376 864 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 B4DLN1 442 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
CHD2-205ENST00000625662 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
CHD2-205ENST00000625662 DISP3Q9P2K9 1392 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 CYP46A1Q9Y6A2 500 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 PLCG2P16885 1265 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
CHD2-205ENST00000625662 PCMTD1Q96MG8 357 aaPredicted RBP13.92□□□□□ -0.18
CHD2-205ENST00000625662 NAPBQ9H115 298 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
CHD2-205ENST00000625662 PDIA4P13667 645 aaKnown RBP13.91□□□□□ -0.18
CHD2-205ENST00000625662 NUCB2P80303 420 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 VPS37CA5D8V6 355 aaPredicted RBP13.91□□□□□ -0.18
CHD2-205ENST00000625662 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
CHD2-205ENST00000625662 CCDC196A0A1B0GTZ2 297 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 SLFN5Q08AF3 891 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 WDR78Q5VTH9 848 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 IQCA1Q86XH1 822 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 CERKQ8TCT0 537 aa13.91□□□□□ -0.18
CHD2-205ENST00000625662 MSNP26038 577 aaKnown RBP13.9□□□□□ -0.18
CHD2-205ENST00000625662 ZNF396Q96N95 335 aaPredicted RBP13.9□□□□□ -0.18
CHD2-205ENST00000625662 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
CHD2-205ENST00000625662 GPR162Q16538 588 aa13.9□□□□□ -0.18
CHD2-205ENST00000625662 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
CHD2-205ENST00000625662 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
CHD2-205ENST00000625662 CRNKL1Q9BZJ0 848 aaKnown RBP13.9□□□□□ -0.18
CHD2-205ENST00000625662 EPS15P42566 896 aa13.9□□□□□ -0.18
CHD2-205ENST00000625662 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
CHD2-205ENST00000625662 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
CHD2-205ENST00000625662 NUP133Q8WUM0 1156 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 PDE4BQ07343 736 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 ADGBQ8N7X0 1667 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 ERVK-7P63135 1459 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 PLEKHH1Q9ULM0 1364 aa13.89□□□□□ -0.19
CHD2-205ENST00000625662 UBE3BQ7Z3V4 1068 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
CHD2-205ENST00000625662 ERVV-2B6SEH9 535 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 ALDH1B1P30837 517 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 KSR2Q6VAB6 950 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 MAST3O60307 1309 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 BCAR3O75815 825 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 FANCIQ9NVI1 1328 aa13.88□□□□□ -0.19
CHD2-205ENST00000625662 CCDC96Q2M329 555 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms