RNA–Protein interactions for RNA: ENST00000625249.1

PNPT1-207, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5 BASIC

Gene PNPT1, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-207ENST00000625249 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
PNPT1-207ENST00000625249 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
PNPT1-207ENST00000625249 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
PNPT1-207ENST00000625249 DPEP1P16444 411 aa17.55■□□□□ 0.4
PNPT1-207ENST00000625249 KCNA3P22001 575 aa17.55■□□□□ 0.4
PNPT1-207ENST00000625249 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
PNPT1-207ENST00000625249 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
PNPT1-207ENST00000625249 BCL2L12Q9HB09 334 aa17.55■□□□□ 0.4
PNPT1-207ENST00000625249 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
PNPT1-207ENST00000625249 TM4SF1P30408 202 aa17.54■□□□□ 0.4
PNPT1-207ENST00000625249 C1QTNF8P60827 252 aa17.54■□□□□ 0.4
PNPT1-207ENST00000625249 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
PNPT1-207ENST00000625249 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
PNPT1-207ENST00000625249 COL11A2P13942 1736 aaPredicted RBP17.53■□□□□ 0.4
PNPT1-207ENST00000625249 SBF1O95248 1867 aa17.53■□□□□ 0.4
PNPT1-207ENST00000625249 ZNF790Q6PG37 636 aa17.53■□□□□ 0.4
PNPT1-207ENST00000625249 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
PNPT1-207ENST00000625249 TEFQ10587 303 aa17.52■□□□□ 0.4
PNPT1-207ENST00000625249 NARFQ9UHQ1 456 aa17.52■□□□□ 0.4
PNPT1-207ENST00000625249 KCNQ3O43525 872 aa17.51■□□□□ 0.39
PNPT1-207ENST00000625249 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
PNPT1-207ENST00000625249 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
PNPT1-207ENST00000625249 BCS1LQ9Y276 419 aa17.51■□□□□ 0.39
PNPT1-207ENST00000625249 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
PNPT1-207ENST00000625249 EIF5P55010 431 aaKnown RBP17.5■□□□□ 0.39
PNPT1-207ENST00000625249 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
PNPT1-207ENST00000625249 NFIXQ14938 502 aa17.5■□□□□ 0.39
PNPT1-207ENST00000625249 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
PNPT1-207ENST00000625249 ZPR1O75312 459 aa17.49■□□□□ 0.39
PNPT1-207ENST00000625249 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
PNPT1-207ENST00000625249 CHRNA5P30532 468 aa17.48■□□□□ 0.39
PNPT1-207ENST00000625249 MCM10Q7L590 875 aa17.48■□□□□ 0.39
PNPT1-207ENST00000625249 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
PNPT1-207ENST00000625249 FCHSD2O94868 740 aa17.47■□□□□ 0.39
PNPT1-207ENST00000625249 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
PNPT1-207ENST00000625249 PRAMEF22A3QJZ6 481 aa17.46■□□□□ 0.39
PNPT1-207ENST00000625249 STARD3NLO95772 234 aa17.46■□□□□ 0.39
PNPT1-207ENST00000625249 DCTN1Q14203 1278 aa17.46■□□□□ 0.39
PNPT1-207ENST00000625249 ZNF526Q8TF50 670 aaPredicted RBP17.46■□□□□ 0.39
PNPT1-207ENST00000625249 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
PNPT1-207ENST00000625249 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
PNPT1-207ENST00000625249 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
PNPT1-207ENST00000625249 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
PNPT1-207ENST00000625249 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
PNPT1-207ENST00000625249 A1BGP04217 495 aa17.44■□□□□ 0.38
PNPT1-207ENST00000625249 GPBP1L1Q9HC44 474 aaPredicted RBP17.44■□□□□ 0.38
PNPT1-207ENST00000625249 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
PNPT1-207ENST00000625249 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
PNPT1-207ENST00000625249 SERPINB2P05120 415 aa17.43■□□□□ 0.38
PNPT1-207ENST00000625249 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
PNPT1-207ENST00000625249 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
PNPT1-207ENST00000625249 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
PNPT1-207ENST00000625249 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
PNPT1-207ENST00000625249 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
PNPT1-207ENST00000625249 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
PNPT1-207ENST00000625249 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
PNPT1-207ENST00000625249 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
PNPT1-207ENST00000625249 KIF3CO14782 793 aa17.41■□□□□ 0.38
PNPT1-207ENST00000625249 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
PNPT1-207ENST00000625249 DALRD3Q5D0E6 543 aaKnown RBP17.41■□□□□ 0.38
PNPT1-207ENST00000625249 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
PNPT1-207ENST00000625249 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
PNPT1-207ENST00000625249 TNRC6CQ9HCJ0 1690 aaKnown RBP17.4■□□□□ 0.38
PNPT1-207ENST00000625249 A0A087WZG4 1122 aa17.4■□□□□ 0.38
PNPT1-207ENST00000625249 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
PNPT1-207ENST00000625249 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
PNPT1-207ENST00000625249 ZNF330Q9Y3S2 320 aaPredicted RBP17.4■□□□□ 0.38
PNPT1-207ENST00000625249 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
PNPT1-207ENST00000625249 NUP98P52948 1817 aa17.38■□□□□ 0.37
PNPT1-207ENST00000625249 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
PNPT1-207ENST00000625249 PRELPP51888 382 aa17.38■□□□□ 0.37
PNPT1-207ENST00000625249 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
PNPT1-207ENST00000625249 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
PNPT1-207ENST00000625249 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
PNPT1-207ENST00000625249 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
PNPT1-207ENST00000625249 C9orf131Q5VYM1 1079 aa17.37■□□□□ 0.37
PNPT1-207ENST00000625249 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
PNPT1-207ENST00000625249 CEP350Q5VT06 3117 aa17.37■□□□□ 0.37
PNPT1-207ENST00000625249 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
PNPT1-207ENST00000625249 RASSF7Q02833 373 aa17.36■□□□□ 0.37
PNPT1-207ENST00000625249 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
PNPT1-207ENST00000625249 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
PNPT1-207ENST00000625249 CCDC24Q8N4L8 307 aa17.36■□□□□ 0.37
PNPT1-207ENST00000625249 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
PNPT1-207ENST00000625249 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
PNPT1-207ENST00000625249 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
PNPT1-207ENST00000625249 NMRK2Q9NPI5 230 aa17.35■□□□□ 0.37
PNPT1-207ENST00000625249 RNF181Q9P0P0 153 aa17.33■□□□□ 0.36
PNPT1-207ENST00000625249 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
PNPT1-207ENST00000625249 BRIP1Q9BX63 1249 aa17.32■□□□□ 0.36
PNPT1-207ENST00000625249 H0YIN7 160 aa17.31■□□□□ 0.36
PNPT1-207ENST00000625249 NFKBIEO00221 500 aa17.31■□□□□ 0.36
PNPT1-207ENST00000625249 DDX10Q13206 875 aaKnown RBP17.31■□□□□ 0.36
PNPT1-207ENST00000625249 RALBP1Q15311 655 aa17.31■□□□□ 0.36
PNPT1-207ENST00000625249 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
PNPT1-207ENST00000625249 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
PNPT1-207ENST00000625249 HSPA6P17066 643 aa17.3■□□□□ 0.36
PNPT1-207ENST00000625249 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
PNPT1-207ENST00000625249 CLEC4GQ6UXB4 293 aa17.3■□□□□ 0.36
PNPT1-207ENST00000625249 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms