RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 RLBP1P12271 317 aa14.98□□□□□ -0.01
LINC00963-220ENST00000625171 YY1P25490 414 aa14.98□□□□□ -0.01
LINC00963-220ENST00000625171 HDGFL1Q5TGJ6 251 aa14.98□□□□□ -0.01
LINC00963-220ENST00000625171 NBPF14Q5TI25 921 aa14.98□□□□□ -0.01
LINC00963-220ENST00000625171 INTS3Q68E01 1043 aaKnown RBP14.98□□□□□ -0.01
LINC00963-220ENST00000625171 TTC5Q8N0Z6 440 aa14.98□□□□□ -0.01
LINC00963-220ENST00000625171 DBF4Q9UBU7 674 aaPredicted RBP14.98□□□□□ -0.01
LINC00963-220ENST00000625171 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
LINC00963-220ENST00000625171 FTSJ3Q8IY81 847 aaKnown RBP14.97□□□□□ -0.01
LINC00963-220ENST00000625171 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
LINC00963-220ENST00000625171 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
LINC00963-220ENST00000625171 TEX13AQ9BXU3 409 aaPredicted RBP14.97□□□□□ -0.01
LINC00963-220ENST00000625171 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
LINC00963-220ENST00000625171 IBTKQ9P2D0 1353 aaPredicted RBP14.97□□□□□ -0.01
LINC00963-220ENST00000625171 PANK1Q8TE04 598 aa14.96□□□□□ -0.01
LINC00963-220ENST00000625171 PIGBQ92521 554 aa14.96□□□□□ -0.01
LINC00963-220ENST00000625171 DDX21Q9NR30 783 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC00963-220ENST00000625171 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
LINC00963-220ENST00000625171 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
LINC00963-220ENST00000625171 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
LINC00963-220ENST00000625171 COG6Q9Y2V7 657 aa14.95□□□□□ -0.02
LINC00963-220ENST00000625171 NUP188Q5SRE5 1749 aa14.95□□□□□ -0.02
LINC00963-220ENST00000625171 UBR2Q8IWV8 1755 aa14.94□□□□□ -0.02
LINC00963-220ENST00000625171 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
LINC00963-220ENST00000625171 FLIIQ13045 1269 aa14.94□□□□□ -0.02
LINC00963-220ENST00000625171 PDIA6Q15084 440 aa14.94□□□□□ -0.02
LINC00963-220ENST00000625171 CLUAP1Q96AJ1 413 aa14.94□□□□□ -0.02
LINC00963-220ENST00000625171 SPON1Q9HCB6 807 aa14.94□□□□□ -0.02
LINC00963-220ENST00000625171 KCPQ6ZWJ8 1503 aa14.93□□□□□ -0.02
LINC00963-220ENST00000625171 TOGARAM1Q9Y4F4 1720 aa14.93□□□□□ -0.02
LINC00963-220ENST00000625171 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
LINC00963-220ENST00000625171 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
LINC00963-220ENST00000625171 ATG3Q9NT62 314 aa14.93□□□□□ -0.02
LINC00963-220ENST00000625171 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
LINC00963-220ENST00000625171 CCT4P50991 539 aaKnown RBP14.92□□□□□ -0.02
LINC00963-220ENST00000625171 CCDC136Q96JN2 1154 aa14.92□□□□□ -0.02
LINC00963-220ENST00000625171 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
LINC00963-220ENST00000625171 TNNQ9UQP3 1299 aa14.92□□□□□ -0.02
LINC00963-220ENST00000625171 PXDNLA1KZ92 1463 aa14.91□□□□□ -0.02
LINC00963-220ENST00000625171 KCNQ2O43526 872 aa14.91□□□□□ -0.02
LINC00963-220ENST00000625171 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
LINC00963-220ENST00000625171 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
LINC00963-220ENST00000625171 G2E3Q7L622 706 aa14.91□□□□□ -0.02
LINC00963-220ENST00000625171 LRP10Q7Z4F1 713 aa14.91□□□□□ -0.02
LINC00963-220ENST00000625171 CHPF2Q9P2E5 772 aa14.91□□□□□ -0.02
LINC00963-220ENST00000625171 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
LINC00963-220ENST00000625171 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
LINC00963-220ENST00000625171 SMARCC1Q92922 1105 aaPredicted RBP14.9□□□□□ -0.02
LINC00963-220ENST00000625171 ITGB4P16144 1822 aa14.89□□□□□ -0.03
LINC00963-220ENST00000625171 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
LINC00963-220ENST00000625171 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
LINC00963-220ENST00000625171 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
LINC00963-220ENST00000625171 KSR2Q6VAB6 950 aa14.88□□□□□ -0.03
LINC00963-220ENST00000625171 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
LINC00963-220ENST00000625171 PHAXQ9H814 394 aaKnown RBP14.88□□□□□ -0.03
LINC00963-220ENST00000625171 ATP10DQ9P241 1426 aa14.88□□□□□ -0.03
LINC00963-220ENST00000625171 PRAMEF22A3QJZ6 481 aa14.87□□□□□ -0.03
LINC00963-220ENST00000625171 PLSCR1O15162 318 aa14.87□□□□□ -0.03
LINC00963-220ENST00000625171 DDX58O95786 925 aaKnown RBP14.87□□□□□ -0.03
LINC00963-220ENST00000625171 FKBP5Q13451 457 aaPredicted RBP14.87□□□□□ -0.03
LINC00963-220ENST00000625171 B4GALNT3Q6L9W6 998 aa14.87□□□□□ -0.03
LINC00963-220ENST00000625171 CICQ96RK0 1608 aaPredicted RBP14.87□□□□□ -0.03
LINC00963-220ENST00000625171 KDM2BQ8NHM5 1336 aa14.87□□□□□ -0.03
LINC00963-220ENST00000625171 STARD3NLO95772 234 aa14.86□□□□□ -0.03
LINC00963-220ENST00000625171 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
LINC00963-220ENST00000625171 CENPQQ7L2Z9 268 aaPredicted RBP14.86□□□□□ -0.03
LINC00963-220ENST00000625171 ZNF831Q5JPB2 1677 aa14.86□□□□□ -0.03
LINC00963-220ENST00000625171 LAMB4A4D0S4 1761 aa14.85□□□□□ -0.03
LINC00963-220ENST00000625171 DNAAF4Q8WXU2 420 aa14.85□□□□□ -0.03
LINC00963-220ENST00000625171 UTRNP46939 3433 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 PI4KAP2A4QPH2 592 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
LINC00963-220ENST00000625171 ALDH1L1O75891 902 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 PROSER3Q2NL68 480 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 PI4KAP1Q8N8J0 262 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 RWDD1Q9H446 243 aaPredicted RBP14.84□□□□□ -0.03
LINC00963-220ENST00000625171 PCDHB15Q9Y5E8 787 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 ADCY9O60503 1353 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 C5P01031 1676 aa14.84□□□□□ -0.03
LINC00963-220ENST00000625171 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.03
LINC00963-220ENST00000625171 NBPF26B4DH59 902 aa14.83□□□□□ -0.04
LINC00963-220ENST00000625171 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
LINC00963-220ENST00000625171 HMGB2P26583 209 aaKnown RBP14.83□□□□□ -0.04
LINC00963-220ENST00000625171 NBPF10Q6P3W6 841 aaKnown RBP14.83□□□□□ -0.04
LINC00963-220ENST00000625171 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
LINC00963-220ENST00000625171 NBPF15Q8N660 670 aa14.83□□□□□ -0.04
LINC00963-220ENST00000625171 SLC4A9Q96Q91 983 aa14.83□□□□□ -0.04
LINC00963-220ENST00000625171 F6X3S4 739 aa14.82□□□□□ -0.04
LINC00963-220ENST00000625171 GNAI3P08754 354 aa14.82□□□□□ -0.04
LINC00963-220ENST00000625171 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
LINC00963-220ENST00000625171 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
LINC00963-220ENST00000625171 SRCIN1Q9C0H9 1055 aa14.82□□□□□ -0.04
LINC00963-220ENST00000625171 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
LINC00963-220ENST00000625171 N4BP2Q86UW6 1770 aaPredicted RBP14.82□□□□□ -0.04
LINC00963-220ENST00000625171 CASZ1Q86V15 1759 aa14.81□□□□□ -0.04
LINC00963-220ENST00000625171 LOC102724428A0A0B4J2F2 783 aa14.81□□□□□ -0.04
LINC00963-220ENST00000625171 SIK1P57059 783 aa14.81□□□□□ -0.04
LINC00963-220ENST00000625171 COPS6Q7L5N1 327 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms