RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CUEDC1Q9NWM3 386 aaPredicted RBP6.21□□□□□ -1.42
CDKL5-208ENST00000624953 BACH1O14867 736 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 ATP4AP20648 1035 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 RASA1P20936 1047 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 ITGA6P23229 1130 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 TEAD4Q15561 434 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 PRICKLE2Q7Z3G6 844 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 ANKMY2Q8IV38 441 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 PBXIP1Q96AQ6 731 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 GMCL1Q96IK5 515 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 NESP48681 1621 aa6.2□□□□□ -1.42
CDKL5-208ENST00000624953 RHOQP17081 205 aa6.19□□□□□ -1.42
CDKL5-208ENST00000624953 SEC13P55735 322 aa6.19□□□□□ -1.42
CDKL5-208ENST00000624953 DPYDQ12882 1025 aa6.19□□□□□ -1.42
CDKL5-208ENST00000624953 SUZ12Q15022 739 aaKnown RBP6.19□□□□□ -1.42
CDKL5-208ENST00000624953 CRISPLD1Q9H336 500 aa6.19□□□□□ -1.42
CDKL5-208ENST00000624953 ESF1Q9H501 851 aaKnown RBP6.19□□□□□ -1.42
CDKL5-208ENST00000624953 ERCC6Q03468 1493 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.18□□□□□ -1.42
CDKL5-208ENST00000624953 A0A1B0GTH6 734 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 SFI1A8K8P3 1242 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 EML1O00423 815 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 KCNMA1Q12791 1236 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 SLC27A3Q5K4L6 730 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 SLC9A9Q8IVB4 645 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 TNS4Q8IZW8 715 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 C1orf216Q8TAB5 229 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 ZDHHC3Q9NYG2 299 aa6.18□□□□□ -1.42
CDKL5-208ENST00000624953 WEE1P30291 646 aa6.17□□□□□ -1.42
CDKL5-208ENST00000624953 LBRQ14739 615 aaKnown RBP6.17□□□□□ -1.42
CDKL5-208ENST00000624953 LARP1Q6PKG0 1096 aaKnown RBP6.17□□□□□ -1.42
CDKL5-208ENST00000624953 TRIM22Q8IYM9 498 aa6.17□□□□□ -1.42
CDKL5-208ENST00000624953 TSEN2Q8NCE0 465 aaKnown RBP6.17□□□□□ -1.42
CDKL5-208ENST00000624953 GAS2L2Q8NHY3 880 aa6.17□□□□□ -1.42
CDKL5-208ENST00000624953 ZNF837Q96EG3 531 aaPredicted RBP6.17□□□□□ -1.42
CDKL5-208ENST00000624953 ZNF594Q96JF6 807 aaPredicted RBP6.17□□□□□ -1.42
CDKL5-208ENST00000624953 NIFKQ9BYG3 293 aaKnown RBP6.17□□□□□ -1.42
CDKL5-208ENST00000624953 NDFIP2Q9NV92 336 aa6.17□□□□□ -1.42
CDKL5-208ENST00000624953 SLAIN2Q9P270 581 aa6.17□□□□□ -1.42
CDKL5-208ENST00000624953 SERTAD1Q9UHV2 236 aa6.17□□□□□ -1.42
CDKL5-208ENST00000624953 NCAPD3P42695 1498 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 PPP1R15AO75807 674 aaPredicted RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 F11P03951 625 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 MSX1P28360 303 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 OCLNQ16625 522 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 DBN1Q16643 649 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 SWI5Q1ZZU3 235 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 GNASQ5JWF2 1037 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 RNFT1Q5M7Z0 435 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 WHAMMQ8TF30 809 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 CCDC97Q96F63 343 aaPredicted RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 COL25A1Q9BXS0 654 aaPredicted RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 TIMMDC1Q9NPL8 285 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 HCN2Q9UL51 889 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 GPC6Q9Y625 555 aaPredicted RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 SMARCA4P51532 1647 aa6.16□□□□□ -1.42
CDKL5-208ENST00000624953 ACIN1Q9UKV3 1341 aaKnown RBP6.16□□□□□ -1.42
CDKL5-208ENST00000624953 HMGXB3Q12766 1538 aa6.15□□□□□ -1.42
CDKL5-208ENST00000624953 IGFBP4P22692 258 aa6.15□□□□□ -1.42
CDKL5-208ENST00000624953 PSME1Q06323 249 aa6.15□□□□□ -1.42
CDKL5-208ENST00000624953 GAS6Q14393 721 aa6.15□□□□□ -1.42
CDKL5-208ENST00000624953 STK32AQ8WU08 396 aa6.15□□□□□ -1.42
CDKL5-208ENST00000624953 C2orf49Q9BVC5 232 aaPredicted RBP6.15□□□□□ -1.42
CDKL5-208ENST00000624953 ADAMTS8Q9UP79 889 aa6.15□□□□□ -1.42
CDKL5-208ENST00000624953 TMEM88BA6NKF7 163 aa6.14□□□□□ -1.43
CDKL5-208ENST00000624953 PSMA6P60900 246 aaKnown RBP6.14□□□□□ -1.43
CDKL5-208ENST00000624953 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
CDKL5-208ENST00000624953 TMEM214Q6NUQ4 689 aaKnown RBP6.14□□□□□ -1.43
CDKL5-208ENST00000624953 RFX1P22670 979 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 NOS2P35228 1153 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 TXLNAP40222 546 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 RASSF7Q02833 373 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 SH3PXD2AQ5TCZ1 1133 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 SAMD5Q5TGI4 173 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 TMEM164Q5U3C3 297 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
CDKL5-208ENST00000624953 CLP1Q92989 425 aaKnown RBP6.13□□□□□ -1.43
CDKL5-208ENST00000624953 L3MBTL2Q969R5 705 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 KLRG1Q96E93 195 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 ATAD2BQ9ULI0 1458 aa6.13□□□□□ -1.43
CDKL5-208ENST00000624953 ATAD2Q6PL18 1390 aa6.12□□□□□ -1.43
CDKL5-208ENST00000624953 NLRP8Q86W28 1048 aa6.12□□□□□ -1.43
CDKL5-208ENST00000624953 ZIC5Q96T25 663 aa6.12□□□□□ -1.43
CDKL5-208ENST00000624953 SMARCA2P51531 1590 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 H7C1W4 665 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 FOXO3O43524 673 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 GDF11O95390 407 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 SLURP2P0DP57 97 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 PHKA2P46019 1235 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 CDCA8Q53HL2 280 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 TMEM151AQ8N4L1 468 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 FAM200AQ8TCP9 573 aa6.11□□□□□ -1.43
CDKL5-208ENST00000624953 LAMC3Q9Y6N6 1575 aa6.1□□□□□ -1.43
CDKL5-208ENST00000624953 SERTM1A2A2V5 107 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms