RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 GOLGA6L4A6NEF3 574 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 PPFIA3O75145 1194 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 KMT5BQ4FZB7 885 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 NUTM1Q86Y26 1132 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 PRAM1Q96QH2 718 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 ZFYVE16Q7Z3T8 1539 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 GJB2P29033 226 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
PMS1-221ENST00000624204 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
PMS1-221ENST00000624204 SYCP1Q15431 976 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 A0A087WWV3 80 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
PMS1-221ENST00000624204 GORABQ5T7V8 394 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 LIMCH1Q9UPQ0 1083 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 ZNF397Q8NF99 534 aaPredicted RBP18.05■□□□□ 0.48
PMS1-221ENST00000624204 TNMDQ9H2S6 317 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 CBX8Q9HC52 389 aa18.05■□□□□ 0.48
PMS1-221ENST00000624204 TFIP11Q9UBB9 837 aaKnown RBP18.05■□□□□ 0.48
PMS1-221ENST00000624204 ELF2Q15723 593 aa18.04■□□□□ 0.48
PMS1-221ENST00000624204 CACTINQ8WUQ7 758 aaKnown RBP18.04■□□□□ 0.48
PMS1-221ENST00000624204 TCEANC2Q96MN5 208 aa18.04■□□□□ 0.48
PMS1-221ENST00000624204 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
PMS1-221ENST00000624204 LIG1P18858 919 aa18.04■□□□□ 0.48
PMS1-221ENST00000624204 RUFY3Q7L099 469 aa18.04■□□□□ 0.48
PMS1-221ENST00000624204 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
PMS1-221ENST00000624204 HSPA4P34932 840 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 LARGE1O95461 756 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 FILIP1Q7Z7B0 1213 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 GNAI2P04899 355 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 CASTP20810 708 aaKnown RBP18.03■□□□□ 0.48
PMS1-221ENST00000624204 FBXO38Q6PIJ6 1188 aa18.03■□□□□ 0.48
PMS1-221ENST00000624204 PDIA4P13667 645 aaKnown RBP18.02■□□□□ 0.48
PMS1-221ENST00000624204 ZNF75DP51815 510 aa18.02■□□□□ 0.48
PMS1-221ENST00000624204 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
PMS1-221ENST00000624204 RASEFQ8IZ41 740 aa18.02■□□□□ 0.48
PMS1-221ENST00000624204 DACT1Q9NYF0 836 aa18.02■□□□□ 0.48
PMS1-221ENST00000624204 SNX14Q9Y5W7 946 aa18.02■□□□□ 0.48
PMS1-221ENST00000624204 ZC3H13Q5T200 1668 aaKnown RBP18.02■□□□□ 0.48
PMS1-221ENST00000624204 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 G2E3Q7L622 706 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 MTMR6Q9Y217 621 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 ARID5BQ14865 1188 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 TTC6Q86TZ1 520 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 DNAJC2Q99543 621 aaKnown RBP18.01■□□□□ 0.47
PMS1-221ENST00000624204 CDK19Q9BWU1 502 aa18.01■□□□□ 0.47
PMS1-221ENST00000624204 CCDC144BQ3MJ40 725 aa18■□□□□ 0.47
PMS1-221ENST00000624204 CCDC144CPQ8IYA2 1237 aa18■□□□□ 0.47
PMS1-221ENST00000624204 GTF3C6Q969F1 213 aa18■□□□□ 0.47
PMS1-221ENST00000624204 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
PMS1-221ENST00000624204 IL13P35225 146 aa18■□□□□ 0.47
PMS1-221ENST00000624204 ZNF165P49910 485 aa18■□□□□ 0.47
PMS1-221ENST00000624204 TRIM34Q9BYJ4 488 aa18■□□□□ 0.47
PMS1-221ENST00000624204 KRT85P78386 507 aa18■□□□□ 0.47
PMS1-221ENST00000624204 STK3Q13188 491 aa18■□□□□ 0.47
PMS1-221ENST00000624204 PTPRCP08575 1304 aa17.99■□□□□ 0.47
PMS1-221ENST00000624204 CWC27Q6UX04 472 aaKnown RBP17.99■□□□□ 0.47
PMS1-221ENST00000624204 DEPDC5O75140 1603 aa17.99■□□□□ 0.47
PMS1-221ENST00000624204 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
PMS1-221ENST00000624204 YEATS2Q9ULM3 1422 aa17.99■□□□□ 0.47
PMS1-221ENST00000624204 GLI2P10070 1586 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 POLR3GO15318 223 aaPredicted RBP17.98■□□□□ 0.47
PMS1-221ENST00000624204 RBM6P78332 1123 aaKnown RBP17.98■□□□□ 0.47
PMS1-221ENST00000624204 NOL10Q9BSC4 688 aaKnown RBP17.98■□□□□ 0.47
PMS1-221ENST00000624204 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 RAD50Q92878 1312 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 LARP1BQ659C4 914 aaKnown RBP17.98■□□□□ 0.47
PMS1-221ENST00000624204 TMX1Q9H3N1 280 aa17.98■□□□□ 0.47
PMS1-221ENST00000624204 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 TTC14Q96N46 770 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 GOLGA6L19H0YKK7 550 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 BICD2Q8TD16 824 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 SKILP12757 684 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 CAPN2P17655 700 aa17.97■□□□□ 0.47
PMS1-221ENST00000624204 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
PMS1-221ENST00000624204 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
PMS1-221ENST00000624204 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.47
PMS1-221ENST00000624204 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.47
PMS1-221ENST00000624204 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.47
PMS1-221ENST00000624204 NME9Q86XW9 330 aa17.96■□□□□ 0.47
PMS1-221ENST00000624204 PLA2G4DQ86XP0 818 aa17.95■□□□□ 0.46
PMS1-221ENST00000624204 PDRG1Q9NUG6 133 aa17.95■□□□□ 0.46
PMS1-221ENST00000624204 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
PMS1-221ENST00000624204 HNRNPH2P55795 449 aaKnown RBP17.94■□□□□ 0.46
PMS1-221ENST00000624204 OS9Q13438 667 aaPredicted RBP17.94■□□□□ 0.46
PMS1-221ENST00000624204 CDC37L1Q7L3B6 337 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 ERO1AQ96HE7 468 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 SPATA32Q96LK8 384 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 FANCAO15360 1455 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 TNNT3P45378 269 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms