RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 CNGB1Q14028 1251 aaPredicted RBP7.99□□□□□ -1.13
LINC00963-215ENST00000622972 C3orf67Q6ZVT6 689 aa7.99□□□□□ -1.13
LINC00963-215ENST00000622972 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
LINC00963-215ENST00000622972 POLKQ9UBT6 870 aa7.99□□□□□ -1.13
LINC00963-215ENST00000622972 KIF24Q5T7B8 1368 aa7.98□□□□□ -1.13
LINC00963-215ENST00000622972 DLG5Q8TDM6 1919 aa7.98□□□□□ -1.13
LINC00963-215ENST00000622972 GPR162Q16538 588 aa7.98□□□□□ -1.13
LINC00963-215ENST00000622972 SPG7Q9UQ90 795 aa7.98□□□□□ -1.13
LINC00963-215ENST00000622972 PAPPAQ13219 1627 aa7.97□□□□□ -1.13
LINC00963-215ENST00000622972 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
LINC00963-215ENST00000622972 TMC2Q8TDI7 906 aa7.97□□□□□ -1.13
LINC00963-215ENST00000622972 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.97□□□□□ -1.13
LINC00963-215ENST00000622972 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
LINC00963-215ENST00000622972 PNPLA7Q6ZV29 1317 aa7.97□□□□□ -1.13
LINC00963-215ENST00000622972 LY75O60449 1722 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 CYP27B1O15528 508 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 CCDC184Q52MB2 194 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 MSL1Q68DK7 614 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 SMARCC1Q92922 1105 aaPredicted RBP7.96□□□□□ -1.14
LINC00963-215ENST00000622972 AK7Q96M32 723 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 EYA1Q99502 592 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 LARP6Q9BRS8 491 aaKnown RBP7.96□□□□□ -1.14
LINC00963-215ENST00000622972 PALLDQ8WX93 1383 aa7.96□□□□□ -1.14
LINC00963-215ENST00000622972 ITGB4P16144 1822 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 PHF14O94880 888 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 PPP2R1AP30153 589 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 MORC1Q86VD1 984 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 COL23A1Q86Y22 540 aaPredicted RBP7.95□□□□□ -1.14
LINC00963-215ENST00000622972 TMOD3Q9NYL9 352 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 ADAMTS7Q9UKP4 1686 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 QSER1Q2KHR3 1735 aa7.95□□□□□ -1.14
LINC00963-215ENST00000622972 TUBGCP6Q96RT7 1819 aa7.94□□□□□ -1.14
LINC00963-215ENST00000622972 MAMSTRQ6ZN01 415 aa7.94□□□□□ -1.14
LINC00963-215ENST00000622972 IFNL2Q8IZJ0 200 aa7.94□□□□□ -1.14
LINC00963-215ENST00000622972 FLAD1Q8NFF5 587 aa7.94□□□□□ -1.14
LINC00963-215ENST00000622972 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
LINC00963-215ENST00000622972 C5P01031 1676 aa7.93□□□□□ -1.14
LINC00963-215ENST00000622972 SIPA1L3O60292 1781 aaPredicted RBP7.93□□□□□ -1.14
LINC00963-215ENST00000622972 SCN11AQ9UI33 1791 aa7.93□□□□□ -1.14
LINC00963-215ENST00000622972 MTHFSP49914 203 aa7.93□□□□□ -1.14
LINC00963-215ENST00000622972 EIF4A2Q14240 407 aaKnown RBP7.93□□□□□ -1.14
LINC00963-215ENST00000622972 PIGBQ92521 554 aa7.93□□□□□ -1.14
LINC00963-215ENST00000622972 DDX27Q96GQ7 796 aaKnown RBP7.93□□□□□ -1.14
LINC00963-215ENST00000622972 PRKRIP1Q9H875 184 aaPredicted RBP7.93□□□□□ -1.14
LINC00963-215ENST00000622972 GPHNQ9NQX3 736 aaPredicted RBP7.93□□□□□ -1.14
LINC00963-215ENST00000622972 CHD4Q14839 1912 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 LOC102724428A0A0B4J2F2 783 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 POTEB2H3BUK9 544 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 PHKG2P15735 406 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 IL13P35225 146 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 ATP6V1AP38606 617 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 SIK1P57059 783 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 PLEKHO1Q53GL0 409 aaPredicted RBP7.92□□□□□ -1.14
LINC00963-215ENST00000622972 AEBP1Q8IUX7 1158 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 NLGN2Q8NFZ4 835 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 SCUBE2Q9NQ36 999 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 IGSF1Q8N6C5 1336 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 MAP3K5Q99683 1374 aa7.92□□□□□ -1.14
LINC00963-215ENST00000622972 C2orf72A6NCS6 295 aa7.91□□□□□ -1.14
LINC00963-215ENST00000622972 GNPATO15228 680 aa7.91□□□□□ -1.14
LINC00963-215ENST00000622972 HSP90AB1P08238 724 aaKnown RBP7.91□□□□□ -1.14
LINC00963-215ENST00000622972 C1orf141Q5JVX7 400 aa7.91□□□□□ -1.14
LINC00963-215ENST00000622972 ZNF530Q6P9A1 599 aaPredicted RBP7.91□□□□□ -1.14
LINC00963-215ENST00000622972 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
LINC00963-215ENST00000622972 ASAP1Q9ULH1 1129 aa7.91□□□□□ -1.14
LINC00963-215ENST00000622972 KDRP35968 1356 aa7.91□□□□□ -1.14
LINC00963-215ENST00000622972 TAF1LQ8IZX4 1826 aa7.91□□□□□ -1.14
LINC00963-215ENST00000622972 C4BP0C0L5 1744 aa7.9□□□□□ -1.14
LINC00963-215ENST00000622972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.9□□□□□ -1.14
LINC00963-215ENST00000622972 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
LINC00963-215ENST00000622972 CABP4P57796 275 aa7.9□□□□□ -1.14
LINC00963-215ENST00000622972 SMIM5Q71RC9 77 aa7.9□□□□□ -1.14
LINC00963-215ENST00000622972 MYBBP1AQ9BQG0 1328 aaKnown RBP7.89□□□□□ -1.15
LINC00963-215ENST00000622972 SSFA2P28290 1259 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 MFSD10Q14728 455 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 AMOTQ4VCS5 1084 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 PPP1R15BQ5SWA1 713 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 SULT6B1Q6IMI4 303 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 DCAF5Q96JK2 942 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 WWC3Q9ULE0 1092 aa7.89□□□□□ -1.15
LINC00963-215ENST00000622972 ERVV-2B6SEH9 535 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 POTEJP0CG39 1038 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 FOXK1P85037 733 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 LHX8Q68G74 356 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 TMEM92Q6UXU6 159 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 ATG3Q9NT62 314 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 RTCBQ9Y3I0 505 aaKnown RBP7.88□□□□□ -1.15
LINC00963-215ENST00000622972 CD2APQ9Y5K6 639 aa7.88□□□□□ -1.15
LINC00963-215ENST00000622972 COL24A1Q17RW2 1714 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 KIF3CO14782 793 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 PTCD1O75127 700 aaKnown RBP7.87□□□□□ -1.15
LINC00963-215ENST00000622972 YBX3P16989 372 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC00963-215ENST00000622972 ITPK1Q13572 414 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 DSG2Q14126 1118 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 RALBP1Q15311 655 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 E2F4Q16254 413 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 TRAPPC3LQ5T215 181 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 PLPP6Q8IY26 295 aa7.87□□□□□ -1.15
LINC00963-215ENST00000622972 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms