RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, humanhuman

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG5-213ENST00000622963 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
SNHG5-213ENST00000622963 MAP3K13O43283 966 aa16.42■□□□□ 0.22
SNHG5-213ENST00000622963 TMF1P82094 1093 aa16.42■□□□□ 0.22
SNHG5-213ENST00000622963 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
SNHG5-213ENST00000622963 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
SNHG5-213ENST00000622963 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
SNHG5-213ENST00000622963 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
SNHG5-213ENST00000622963 PHKG2P15735 406 aa16.41■□□□□ 0.22
SNHG5-213ENST00000622963 PRELPP51888 382 aa16.41■□□□□ 0.22
SNHG5-213ENST00000622963 FSTL1Q12841 308 aa16.41■□□□□ 0.22
SNHG5-213ENST00000622963 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
SNHG5-213ENST00000622963 EYA1Q99502 592 aa16.41■□□□□ 0.22
SNHG5-213ENST00000622963 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 RRAGCQ9HB90 399 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
SNHG5-213ENST00000622963 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
SNHG5-213ENST00000622963 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
SNHG5-213ENST00000622963 C16orf71Q8IYS4 520 aaPredicted RBP16.39■□□□□ 0.21
SNHG5-213ENST00000622963 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
SNHG5-213ENST00000622963 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
SNHG5-213ENST00000622963 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
SNHG5-213ENST00000622963 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
SNHG5-213ENST00000622963 DDR1Q08345 913 aa16.38■□□□□ 0.21
SNHG5-213ENST00000622963 CHRNA5P30532 468 aa16.37■□□□□ 0.21
SNHG5-213ENST00000622963 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
SNHG5-213ENST00000622963 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
SNHG5-213ENST00000622963 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
SNHG5-213ENST00000622963 IFNL2Q8IZJ0 200 aa16.36■□□□□ 0.21
SNHG5-213ENST00000622963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNHG5-213ENST00000622963 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
SNHG5-213ENST00000622963 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
SNHG5-213ENST00000622963 ZNF831Q5JPB2 1677 aa16.35■□□□□ 0.21
SNHG5-213ENST00000622963 TNRC6CQ9HCJ0 1690 aaKnown RBP16.35■□□□□ 0.21
SNHG5-213ENST00000622963 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
SNHG5-213ENST00000622963 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
SNHG5-213ENST00000622963 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
SNHG5-213ENST00000622963 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
SNHG5-213ENST00000622963 RASSF7Q02833 373 aa16.35■□□□□ 0.21
SNHG5-213ENST00000622963 FKBP8Q14318 412 aa16.35■□□□□ 0.21
SNHG5-213ENST00000622963 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
SNHG5-213ENST00000622963 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
SNHG5-213ENST00000622963 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
SNHG5-213ENST00000622963 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
SNHG5-213ENST00000622963 DALRD3Q5D0E6 543 aaKnown RBP16.34■□□□□ 0.21
SNHG5-213ENST00000622963 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
SNHG5-213ENST00000622963 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
SNHG5-213ENST00000622963 RFC4P35249 363 aa16.33■□□□□ 0.2
SNHG5-213ENST00000622963 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
SNHG5-213ENST00000622963 SMC1BQ8NDV3 1235 aa16.33■□□□□ 0.2
SNHG5-213ENST00000622963 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
SNHG5-213ENST00000622963 SBF1O95248 1867 aa16.33■□□□□ 0.2
SNHG5-213ENST00000622963 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
SNHG5-213ENST00000622963 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
SNHG5-213ENST00000622963 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
SNHG5-213ENST00000622963 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
SNHG5-213ENST00000622963 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
SNHG5-213ENST00000622963 TJP1Q07157 1748 aa16.29■□□□□ 0.2
SNHG5-213ENST00000622963 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
SNHG5-213ENST00000622963 POLRMTO00411 1230 aaKnown RBP16.29■□□□□ 0.2
SNHG5-213ENST00000622963 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
SNHG5-213ENST00000622963 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
SNHG5-213ENST00000622963 POTECB2RU33 542 aa16.27■□□□□ 0.2
SNHG5-213ENST00000622963 TM4SF1P30408 202 aa16.27■□□□□ 0.2
SNHG5-213ENST00000622963 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
SNHG5-213ENST00000622963 GLTPD2A6NH11 291 aa16.25■□□□□ 0.19
SNHG5-213ENST00000622963 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
SNHG5-213ENST00000622963 NFKBIEO00221 500 aa16.24■□□□□ 0.19
SNHG5-213ENST00000622963 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
SNHG5-213ENST00000622963 SEC24BO95487 1268 aa16.24■□□□□ 0.19
SNHG5-213ENST00000622963 IER5LQ5T953 404 aa16.24■□□□□ 0.19
SNHG5-213ENST00000622963 LCE2DQ5TA82 110 aaPredicted RBP16.24■□□□□ 0.19
SNHG5-213ENST00000622963 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
SNHG5-213ENST00000622963 FAM163AQ96GL9 167 aaPredicted RBP16.24■□□□□ 0.19
SNHG5-213ENST00000622963 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
SNHG5-213ENST00000622963 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
SNHG5-213ENST00000622963 VEGFAP15692 232 aaPredicted RBP16.23■□□□□ 0.19
SNHG5-213ENST00000622963 CABP4P57796 275 aa16.23■□□□□ 0.19
SNHG5-213ENST00000622963 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
SNHG5-213ENST00000622963 LMNB1P20700 586 aa16.22■□□□□ 0.19
SNHG5-213ENST00000622963 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
SNHG5-213ENST00000622963 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
SNHG5-213ENST00000622963 PCDHB13Q9Y5F0 798 aa16.22■□□□□ 0.19
SNHG5-213ENST00000622963 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
SNHG5-213ENST00000622963 NUBP1P53384 320 aa16.21■□□□□ 0.19
SNHG5-213ENST00000622963 NFIXQ14938 502 aa16.21■□□□□ 0.19
SNHG5-213ENST00000622963 BCL2L12Q9HB09 334 aa16.21■□□□□ 0.19
SNHG5-213ENST00000622963 AFDNP55196 1824 aaKnown RBP16.21■□□□□ 0.19
SNHG5-213ENST00000622963 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.18
SNHG5-213ENST00000622963 SOS1Q07889 1333 aaPredicted RBP16.2■□□□□ 0.18
SNHG5-213ENST00000622963 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
SNHG5-213ENST00000622963 DNAJC10Q8IXB1 793 aa16.2■□□□□ 0.18
SNHG5-213ENST00000622963 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
SNHG5-213ENST00000622963 MKRN1Q9UHC7 482 aaKnown RBP16.2■□□□□ 0.18
SNHG5-213ENST00000622963 COLQQ9Y215 455 aaPredicted RBP16.2■□□□□ 0.18
SNHG5-213ENST00000622963 FOXN1O15353 648 aa16.19■□□□□ 0.18
SNHG5-213ENST00000622963 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms