RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
PCDHGC3-207ENST00000622656 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.23
PCDHGC3-207ENST00000622656 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
PCDHGC3-207ENST00000622656 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
PCDHGC3-207ENST00000622656 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
PCDHGC3-207ENST00000622656 BCL2L12Q9HB09 334 aa13.58□□□□□ -0.24
PCDHGC3-207ENST00000622656 COL15A1P39059 1388 aa13.58□□□□□ -0.24
PCDHGC3-207ENST00000622656 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
PCDHGC3-207ENST00000622656 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
PCDHGC3-207ENST00000622656 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
PCDHGC3-207ENST00000622656 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
PCDHGC3-207ENST00000622656 TM4SF1P30408 202 aa13.56□□□□□ -0.24
PCDHGC3-207ENST00000622656 PARP3Q9Y6F1 533 aa13.56□□□□□ -0.24
PCDHGC3-207ENST00000622656 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 GRIN3BO60391 1043 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 A1BGP04217 495 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 DPEP1P16444 411 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 KCNA3P22001 575 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 EIF5P55010 431 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 SCN7AQ01118 1682 aa13.55□□□□□ -0.24
PCDHGC3-207ENST00000622656 NFIXQ14938 502 aa13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 MIS18AQ9NYP9 233 aa13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 ARFGEF1Q9Y6D6 1849 aa13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
PCDHGC3-207ENST00000622656 BCORQ6W2J9 1755 aa13.53□□□□□ -0.24
PCDHGC3-207ENST00000622656 ZPR1O75312 459 aa13.53□□□□□ -0.24
PCDHGC3-207ENST00000622656 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
PCDHGC3-207ENST00000622656 STARD3NLO95772 234 aa13.52□□□□□ -0.25
PCDHGC3-207ENST00000622656 CHRNA5P30532 468 aa13.52□□□□□ -0.25
PCDHGC3-207ENST00000622656 TGFB2P61812 414 aa13.52□□□□□ -0.25
PCDHGC3-207ENST00000622656 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
PCDHGC3-207ENST00000622656 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
PCDHGC3-207ENST00000622656 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
PCDHGC3-207ENST00000622656 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
PCDHGC3-207ENST00000622656 DLEC1Q9Y238 1755 aa13.51□□□□□ -0.25
PCDHGC3-207ENST00000622656 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
PCDHGC3-207ENST00000622656 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
PCDHGC3-207ENST00000622656 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
PCDHGC3-207ENST00000622656 ADCY9O60503 1353 aa13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 RALBP1Q15311 655 aa13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
PCDHGC3-207ENST00000622656 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 SBF1O95248 1867 aa13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 SERPINB2P05120 415 aa13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 COL11A2P13942 1736 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-207ENST00000622656 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-207ENST00000622656 CAMTA2O94983 1202 aa13.48□□□□□ -0.25
PCDHGC3-207ENST00000622656 IL6STP40189 918 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-207ENST00000622656 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
PCDHGC3-207ENST00000622656 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-207ENST00000622656 CCDC146Q8IYE0 955 aa13.47□□□□□ -0.25
PCDHGC3-207ENST00000622656 CCDC88AQ3V6T2 1871 aa13.46□□□□□ -0.25
PCDHGC3-207ENST00000622656 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.25
PCDHGC3-207ENST00000622656 RRP7AQ9Y3A4 280 aaKnown RBP13.46□□□□□ -0.25
PCDHGC3-207ENST00000622656 NUP98P52948 1817 aa13.46□□□□□ -0.26
PCDHGC3-207ENST00000622656 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 A0A087WZG4 1122 aa13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 C1QTNF8P60827 252 aa13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 PIM2Q9P1W9 311 aa13.45□□□□□ -0.26
PCDHGC3-207ENST00000622656 GIGYF1O75420 1035 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-207ENST00000622656 NEFMP07197 916 aa13.44□□□□□ -0.26
PCDHGC3-207ENST00000622656 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
PCDHGC3-207ENST00000622656 RIPK4P57078 832 aa13.44□□□□□ -0.26
PCDHGC3-207ENST00000622656 PRKRIP1Q9H875 184 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC3-207ENST00000622656 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
PCDHGC3-207ENST00000622656 ADAMTS8Q9UP79 889 aa13.43□□□□□ -0.26
PCDHGC3-207ENST00000622656 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
PCDHGC3-207ENST00000622656 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
PCDHGC3-207ENST00000622656 HLFQ16534 295 aa13.42□□□□□ -0.26
PCDHGC3-207ENST00000622656 DALRD3Q5D0E6 543 aaKnown RBP13.42□□□□□ -0.26
PCDHGC3-207ENST00000622656 PRELPP51888 382 aa13.41□□□□□ -0.26
PCDHGC3-207ENST00000622656 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
PCDHGC3-207ENST00000622656 C2CD5Q86YS7 1000 aa13.41□□□□□ -0.26
PCDHGC3-207ENST00000622656 NGEFQ8N5V2 710 aa13.41□□□□□ -0.26
PCDHGC3-207ENST00000622656 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
PCDHGC3-207ENST00000622656 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
PCDHGC3-207ENST00000622656 RASSF7Q02833 373 aa13.4□□□□□ -0.26
PCDHGC3-207ENST00000622656 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
PCDHGC3-207ENST00000622656 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
PCDHGC3-207ENST00000622656 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
PCDHGC3-207ENST00000622656 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms